SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0039407
Gene Symbol: MMP2
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr16:g.55485704C>T COSM4061264 TCGA-CD-A4MG-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6890-3p gccGCAGTGatggct CCACUGCC m6b Created HHFKP_56385_cluster-8608_3_16
hsa-miR-6884-3p gccgcaGTGATGGct CCCAUCAC m7b Created HHFKP_56385_cluster-8608_3_16
hsa-miR-639 gccGCAGCGATggct AUCGCUGC m8a Disrupted HHFKP_56385_cluster-8608_3_16

Mutation Mutation ID Sample Name Cancer Type
chr16:g.55485695C>T COSM1239450 P60 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1199-3p ctgatacCGGCCGCa UGCGGCCG m7b Disrupted HHFKP_56385_cluster-8608_3_16
Mutation Mutation ID Sample Name Cancer Type
chr16:g.55485662C>T COSM4702698 T578 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr16:g.55485658T>A COSM1563070 TCGA-F5-6813-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-708-3p ccctTCTAGTTcaat CAACUAGA m7b Created HHFKP_56385_cluster-8608_3_16
hsa-miR-7158-3p cccttcTAGTTCAat CUGAACUA m7b Created HHFKP_56385_cluster-8608_3_16

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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