SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001302508
Gene Symbol: MMP2
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr16:g.55479613C>T COSM1640507 pfg018T [stomach][NS][adenocarcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1468-5p cccaAAACGGAcaaa CUCCGUUU m7b Disrupted HHFKP_56384_cluster-8608_2_13
hsa-miR-3912-5p cccaaaATGGACAaa AUGUCCAU m7b Created HHFKP_56384_cluster-8608_2_13

Mutation Mutation ID Sample Name Cancer Type
chr16:g.55479605C>T COSM4061258 TCGA-FP-A4BF-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1237-5p atgtCGCCCCCaaaa CGGGGGCG m7b Disrupted HHFKP_56384_cluster-8608_2_13
hsa-miR-1273a aTGTCGCCCccaaaa GGGCGACA m8a (m8a->m7a) HHFKP_56384_cluster-8608_2_13
hsa-miR-1273h-5p atgtcgCTCCCAaaa CUGGGAGG m6b Created HHFKP_56384_cluster-8608_2_13
hsa-miR-1275 atgtcgCCCCCAaaa GUGGGGGA m6b Disrupted HHFKP_56384_cluster-8608_2_13
hsa-miR-30b-3p atgtcgCTCCCAaaa CUGGGAGG m6b Created HHFKP_56384_cluster-8608_2_13
hsa-miR-30c-1-3p atgtcgCTCCCAaaa CUGGGAGA m6b Created HHFKP_56384_cluster-8608_2_13
hsa-miR-30c-2-3p atgtcgCTCCCAaaa CUGGGAGA m6b Created HHFKP_56384_cluster-8608_2_13
hsa-miR-3122 atgtcgcTCCCAAaa GUUGGGAC m6b Created HHFKP_56384_cluster-8608_2_13
hsa-miR-3689a-3p atgtcgCTCCCAaaa CUGGGAGG m6b Created HHFKP_56384_cluster-8608_2_13
hsa-miR-3689b-3p atgtcgCTCCCAaaa CUGGGAGG m6b Created HHFKP_56384_cluster-8608_2_13
hsa-miR-3689c atgtcgCTCCCAaaa CUGGGAGG m6b Created HHFKP_56384_cluster-8608_2_13
hsa-miR-3913-5p atgtcgcTCCCAAAa UUUGGGAC m7a Created HHFKP_56384_cluster-8608_2_13
hsa-miR-4260 atgtcgcCCCCAAaa CUUGGGGC m6b Disrupted HHFKP_56384_cluster-8608_2_13
hsa-miR-4300 atgtcGCTCCCAaaa UGGGAGCU m7a Created HHFKP_56384_cluster-8608_2_13
hsa-miR-4488 atgtCGCCCCCaaaa AGGGGGCG m7b Disrupted HHFKP_56384_cluster-8608_2_13
hsa-miR-450a-1-3p atgtcgcTCCCAAaa AUUGGGAA m6b Created HHFKP_56384_cluster-8608_2_13
hsa-miR-450a-2-3p atgtcgcCCCCAAaa AUUGGGGA m6b Disrupted HHFKP_56384_cluster-8608_2_13
hsa-miR-4665-5p atgtcgCCCCCAaaa CUGGGGGA m6b Disrupted HHFKP_56384_cluster-8608_2_13
hsa-miR-4697-5p atgtCGCCCCCaaaa AGGGGGCG m7b Disrupted HHFKP_56384_cluster-8608_2_13
hsa-miR-5572 atgtcgcCCCCAAaa GUUGGGGU m6b Disrupted HHFKP_56384_cluster-8608_2_13
hsa-miR-5591-5p atgtcGCTCCCAaaa UGGGAGCU m7a Created HHFKP_56384_cluster-8608_2_13
hsa-miR-6090 atgtCGCTCCCaaaa GGGGAGCG m7b Created HHFKP_56384_cluster-8608_2_13
hsa-miR-6513-5p atgtcgcTCCCAAAa UUUGGGAU m7a Created HHFKP_56384_cluster-8608_2_13
hsa-miR-6726-5p atgtcGCTCCCaaaa CGGGAGCU m6b Created HHFKP_56384_cluster-8608_2_13
hsa-miR-6751-5p atgtcgCCCCCAAaa UUGGGGGU m7a Disrupted HHFKP_56384_cluster-8608_2_13
hsa-miR-6779-5p atgtcgCTCCCAaaa CUGGGAGG m6b Created HHFKP_56384_cluster-8608_2_13
hsa-miR-6780a-5p atgtcgCTCCCAAaa UUGGGAGG m7a Created HHFKP_56384_cluster-8608_2_13
hsa-miR-6788-5p atgtcgCTCCCAaaa CUGGGAGA m6b Created HHFKP_56384_cluster-8608_2_13
hsa-miR-6803-5p atgtcgCCCCCAaaa CUGGGGGU m6b Disrupted HHFKP_56384_cluster-8608_2_13
hsa-miR-6827-5p atgtcGCTCCCAaaa UGGGAGCC m7a Created HHFKP_56384_cluster-8608_2_13
hsa-miR-6846-5p atgtcGCCCCCAaaa UGGGGGCU m7a Disrupted HHFKP_56384_cluster-8608_2_13
hsa-miR-6848-5p atgtcGCCCCCAaaa UGGGGGCU m7a Disrupted HHFKP_56384_cluster-8608_2_13
hsa-miR-7109-5p atgtcgCCCCCAaaa CUGGGGGG m6b Disrupted HHFKP_56384_cluster-8608_2_13
hsa-miR-887-5p atgtcgCTCCCAAaa CUUGGGAG m7b Created HHFKP_56384_cluster-8608_2_13
hsa-miR-920 atgtcGCTCCCaaaa GGGGAGCU m6b Created HHFKP_56384_cluster-8608_2_13

Mutation Mutation ID Sample Name Cancer Type
chr16:g.55479596C>T COSM4061257 TCGA-BR-4256-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-181d-3p tcCCCGGTGatgtcg CCACCGGG m7b (m6b->m7b) HHFKP_56384_cluster-8608_2_13
hsa-miR-3913-3p tccccggTGATGTCg AGACAUCA m7b Created HHFKP_56384_cluster-8608_2_13
hsa-miR-4655-5p tCCCCGGTGatgtcg CACCGGGG m8a (m7a->m8a) HHFKP_56384_cluster-8608_2_13
hsa-miR-499a-3p tccccgGTGATGTcg AACAUCAC m7b Created HHFKP_56384_cluster-8608_2_13
hsa-miR-499b-3p tccccgGTGATGTcg AACAUCAC m7b Created HHFKP_56384_cluster-8608_2_13
hsa-miR-6785-3p tccccGGCGATGTcg ACAUCGCC m8a Disrupted HHFKP_56384_cluster-8608_2_13

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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