SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0056525
Gene Symbol: MGAT5
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Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr2:g.134338334C>T COSM4410016 LP6005409-DNA_H01 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr2:g.134338321G>A COSM4582663 10-P083 [bone][NS][Ewings_sarcoma-peripheral_primitive_neuroectodermal_tumour][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-181a-3p aattcCGATGGatga ACCAUCGA m6b Created HHFCT_90118_uc002ttv.1_9_8
hsa-miR-181d-3p aattCCGGTGGatga CCACCGGG m7a Disrupted HHFCT_90118_uc002ttv.1_9_8
hsa-miR-7151-5p aattccGATGGATga GAUCCAUC m7b Created HHFCT_90118_uc002ttv.1_9_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.134338320G>C COSM4556926 CSCC-11-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-181d-3p gaattCCGGTGGatg CCACCGGG m7a Disrupted HHFCT_90118_uc002ttv.1_9_8
hsa-miR-4681 gaaTTCCCGTggatg AACGGGAA m7b Created HHFCT_90118_uc002ttv.1_9_8
hsa-miR-5092 gaattccCGTGGATg AAUCCACG m7b Created HHFCT_90118_uc002ttv.1_9_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.134338294T>C COSM4084948 TCGA-BR-6452-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-154-3p tctacaGTATGATga AAUCAUAC m7b Disrupted HPCB1_21863_G27534.1_135095859
hsa-miR-1-5p tctacAGTATGatga ACAUACUU m6b Disrupted HPCB1_21863_G27534.1_135095859
hsa-miR-4718 tcTACAGCatgatga AGCUGUAC m6b Created HPCB1_21863_G27534.1_135095859
hsa-miR-4728-3p tctaCAGCATGatga CAUGCUGA m7a Created HPCB1_21863_G27534.1_135095859
hsa-miR-487a-3p tctacaGTATGATga AAUCAUAC m7b Disrupted HPCB1_21863_G27534.1_135095859
hsa-miR-1183 tCTACAGTatgatga CACUGUAG m7b Disrupted HPCB3_12445_G16910.1_135095859
hsa-miR-154-3p tctacaGTATGATga AAUCAUAC m7b Disrupted HPCB3_12445_G16910.1_135095859
hsa-miR-1-5p tctacAGTATGatga ACAUACUU m6b Disrupted HPCB3_12445_G16910.1_135095859
hsa-miR-4718 tcTACAGCatgatga AGCUGUAC m6b Created HPCB3_12445_G16910.1_135095859
hsa-miR-4728-3p tctaCAGCATGatga CAUGCUGA m7a Created HPCB3_12445_G16910.1_135095859
hsa-miR-487a-3p tctacaGTATGATga AAUCAUAC m7b Disrupted HPCB3_12445_G16910.1_135095859

Mutation Mutation ID Sample Name Cancer Type
chr2:g.134338288C>T COSM4504818 CSCC-27-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1183 atattctCTACAGTa CACUGUAG m7b Disrupted HPCB1_21863_G27534.1_135095859
hsa-miR-186-5p atATTCTTTacagta CAAAGAAU m7b (m6b->m7b) HPCB1_21863_G27534.1_135095859
hsa-miR-20b-3p atattctCTACAGTa ACUGUAGU m7a Disrupted HPCB1_21863_G27534.1_135095859
hsa-miR-3123 atATTCTCTacagta CAGAGAAU m7b (m7b->m6b) HPCB1_21863_G27534.1_135095859
hsa-miR-3607-3p atattcTTTACAGTa ACUGUAAA m8a Created HPCB1_21863_G27534.1_135095859
hsa-miR-3925-5p ataTTCTCTacagta AAGAGAAC m6b Disrupted HPCB1_21863_G27534.1_135095859
hsa-miR-6832-5p atatTCTCTACagta AGUAGAGA m7b Disrupted HPCB1_21863_G27534.1_135095859
hsa-miR-1183 atattctCTACAGTa CACUGUAG m7b Disrupted HPCB3_12445_G16910.1_135095859
hsa-miR-186-5p atATTCTTTacagta CAAAGAAU m7b (m6b->m7b) HPCB3_12445_G16910.1_135095859
hsa-miR-20b-3p atattctCTACAGTa ACUGUAGU m7a Disrupted HPCB3_12445_G16910.1_135095859
hsa-miR-3123 atATTCTCTacagta CAGAGAAU m7b (m7b->m6b) HPCB3_12445_G16910.1_135095859
hsa-miR-3607-3p atattcTTTACAGTa ACUGUAAA m8a Created HPCB3_12445_G16910.1_135095859
hsa-miR-3925-5p ataTTCTCTacagta AAGAGAAC m6b Disrupted HPCB3_12445_G16910.1_135095859
hsa-miR-6832-5p atatTCTCTACagta AGUAGAGA m7b Disrupted HPCB3_12445_G16910.1_135095859

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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