SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000244
Gene Symbol: MEN1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr11:g.64805749C>T COSM2164478 SNU-C2B [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-141-5p gGGAAGATGaggaga CAUCUUCC m8a (m7a->m8a) HHHNE_10997_MEN1|NM_000244|exon_CDS|-3.68091069293208|0.0769993482889296
hsa-miR-6072 gggaaGATGAGGAga UCCUCAUC m8a Created HHHNE_10997_MEN1|NM_000244|exon_CDS|-3.68091069293208|0.0769993482889296
hsa-miR-6891-3p gggaaGATGAGGaga CCCUCAUC m7b Created HHHNE_10997_MEN1|NM_000244|exon_CDS|-3.68091069293208|0.0769993482889296
hsa-miR-141-5p gGGAAGATGaggaga CAUCUUCC m8a (m7a->m8a) HHHSE_10997_MEN1|NM_000244|exon_CDS|-3.68091069293208|0.0769993482889296
hsa-miR-6072 gggaaGATGAGGAga UCCUCAUC m8a Created HHHSE_10997_MEN1|NM_000244|exon_CDS|-3.68091069293208|0.0769993482889296
hsa-miR-6891-3p gggaaGATGAGGaga CCCUCAUC m7b Created HHHSE_10997_MEN1|NM_000244|exon_CDS|-3.68091069293208|0.0769993482889296

Mutation Mutation ID Sample Name Cancer Type
chr11:g.64805748G>A COSM3451582 TCGA-EE-A181-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4279 ggaagacGAGGAGAt CUCUCCUC m7b Disrupted HHHNE_10997_MEN1|NM_000244|exon_CDS|-3.68091069293208|0.0769993482889296
hsa-miR-511-5p ggAAGACAaggagat GUGUCUUU m6b Created HHHNE_10997_MEN1|NM_000244|exon_CDS|-3.68091069293208|0.0769993482889296
hsa-miR-6740-3p gGAAGACAaggagat UGUCUUCU m7a Created HHHNE_10997_MEN1|NM_000244|exon_CDS|-3.68091069293208|0.0769993482889296
hsa-miR-4279 ggaagacGAGGAGAt CUCUCCUC m7b Disrupted HHHSE_10997_MEN1|NM_000244|exon_CDS|-3.68091069293208|0.0769993482889296
hsa-miR-511-5p ggAAGACAaggagat GUGUCUUU m6b Created HHHSE_10997_MEN1|NM_000244|exon_CDS|-3.68091069293208|0.0769993482889296
hsa-miR-6740-3p gGAAGACAaggagat UGUCUUCU m7a Created HHHSE_10997_MEN1|NM_000244|exon_CDS|-3.68091069293208|0.0769993482889296

Mutation Mutation ID Sample Name Cancer Type
chr11:g.64805747A>G COSM119968 TCGA-10-0927-01 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4279 gaagacGAGGAGAtc CUCUCCUC m7b Disrupted HHHNE_10997_MEN1|NM_000244|exon_CDS|-3.68091069293208|0.0769993482889296
hsa-miR-6763-3p gaagaCGGGGAGatc CUCCCCGG m7a Created HHHNE_10997_MEN1|NM_000244|exon_CDS|-3.68091069293208|0.0769993482889296
hsa-miR-4279 gaagacGAGGAGAtc CUCUCCUC m7b Disrupted HHHSE_10997_MEN1|NM_000244|exon_CDS|-3.68091069293208|0.0769993482889296
hsa-miR-6763-3p gaagaCGGGGAGatc CUCCCCGG m7a Created HHHSE_10997_MEN1|NM_000244|exon_CDS|-3.68091069293208|0.0769993482889296

Mutation Mutation ID Sample Name Cancer Type
chr11:g.64805744GGA>AAA COSM22643 1024460 [soft_tissue][fibrous_tissue_and_uncertain_origin][angiofibroma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4279 aagacGAGGAGAtctac CUCUCCUC m7b Disrupted HHHNE_10997_MEN1|NM_000244|exon_CDS|-3.68091069293208|0.0769993482889296
hsa-miR-4279 aagacGAGGAGAtctac CUCUCCUC m7b Disrupted HHHSE_10997_MEN1|NM_000244|exon_CDS|-3.68091069293208|0.0769993482889296

Mutation Mutation ID Sample Name Cancer Type
chr11:g.64804337C>A COSM3451580 TCGA-EB-A5UL-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1295b-3p aaGGCCTATgaacta AAUAGGCC m7b (m6b->m7b) HPRT3_5291_G6966.1_64571808
hsa-miR-376a-3p aaggcCTATGAacta AUCAUAGA m6b Created HPRT3_5291_G6966.1_64571808
hsa-miR-376b-3p aaggcCTATGAacta AUCAUAGA m6b Created HPRT3_5291_G6966.1_64571808
hsa-miR-4257 aaggCCTCTGaacta CCAGAGGU m6b Disrupted HPRT3_5291_G6966.1_64571808
hsa-miR-5000-5p aaggcctCTGAACTa CAGUUCAG m7b Disrupted HPRT3_5291_G6966.1_64571808
hsa-miR-6847-5p aaggCCTCTGaacta ACAGAGGA m6b Disrupted HPRT3_5291_G6966.1_64571808

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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