SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0028582
Gene Symbol: MED13L
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr12:g.116019942C>T COSM935561 TCGA-AX-A0J1-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-324-5p aatGGGATGCtaaca CGCAUCCC m7b Created HHFKP_33568_cluster-5787_48_15

Mutation Mutation ID Sample Name Cancer Type
chr12:g.116019941G>A COSM201754 TCGA-AA-3949-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3591-5p atgggACACTAAcag UUUAGUGU m7b Created HHFKP_33568_cluster-5787_48_15
hsa-miR-3657 atGGGACACtaacag UGUGUCCC m7b (m6b->m7b) HHFKP_33568_cluster-5787_48_15

Mutation Mutation ID Sample Name Cancer Type
chr12:g.116019869C>T COSM2173315 HCT15 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-197-5p attTCTACCCGatgg CGGGUAGA m8a Disrupted HHFCT_34779_cluster-5787_41_106
hsa-miR-3132 attTCTACCCgatgg UGGGUAGA m7b Disrupted HHFCT_34779_cluster-5787_41_106
hsa-miR-4650-3p atTTCTACCcgatgg AGGUAGAA m7b (m7b->m6b) HHFCT_34779_cluster-5787_41_106
hsa-miR-197-5p attTCTACCCGatgg CGGGUAGA m8a Disrupted HHFKP_33567_cluster-5787_47_17
hsa-miR-3132 attTCTACCCgatgg UGGGUAGA m7b Disrupted HHFKP_33567_cluster-5787_47_17
hsa-miR-4650-3p atTTCTACCcgatgg AGGUAGAA m7b (m7b->m6b) HHFKP_33567_cluster-5787_47_17
hsa-miR-197-5p attTCTACCCGatgg CGGGUAGA m8a Disrupted HHKTA_25990_NM_015335|758|797|2.85568410941597|0.328687470909897
hsa-miR-3132 attTCTACCCgatgg UGGGUAGA m7b Disrupted HHKTA_25990_NM_015335|758|797|2.85568410941597|0.328687470909897
hsa-miR-4650-3p atTTCTACCcgatgg AGGUAGAA m7b (m7b->m6b) HHKTA_25990_NM_015335|758|797|2.85568410941597|0.328687470909897
hsa-miR-197-5p attTCTACCCGatgg CGGGUAGA m8a Disrupted HPCB1_10884_G13554.1_116457670
hsa-miR-3132 attTCTACCCgatgg UGGGUAGA m7b Disrupted HPCB1_10884_G13554.1_116457670
hsa-miR-4650-3p atTTCTACCcgatgg AGGUAGAA m7b (m7b->m6b) HPCB1_10884_G13554.1_116457670
hsa-miR-197-5p attTCTACCCGatgg CGGGUAGA m8a Disrupted HPKTA_16104_G17358.1_116457670
hsa-miR-3132 attTCTACCCgatgg UGGGUAGA m7b Disrupted HPKTA_16104_G17358.1_116457670
hsa-miR-4650-3p atTTCTACCcgatgg AGGUAGAA m7b (m7b->m6b) HPKTA_16104_G17358.1_116457670
hsa-miR-197-5p attTCTACCCGatgg CGGGUAGA m8a Disrupted HPRO6_21753_G25336.1_116457670
hsa-miR-3132 attTCTACCCgatgg UGGGUAGA m7b Disrupted HPRO6_21753_G25336.1_116457670
hsa-miR-4650-3p atTTCTACCcgatgg AGGUAGAA m7b (m7b->m6b) HPRO6_21753_G25336.1_116457670

Mutation Mutation ID Sample Name Cancer Type
chr12:g.116019866G>A COSM1127541 TCGA-CH-5762-01 [prostate][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-181c-3p tctaccCGATGGTgc AACCAUCG m7b Disrupted HHFCT_34779_cluster-5787_41_106
hsa-miR-1225-5p tcTACCCAatggtgc GUGGGUAC m6b Created HHFKP_33567_cluster-5787_47_17
hsa-miR-1229-5p tCTACCCAatggtgc GUGGGUAG m7b Created HHFKP_33567_cluster-5787_47_17
hsa-miR-181c-3p tctaccCGATGGTgc AACCAUCG m7b Disrupted HHFKP_33567_cluster-5787_47_17
hsa-miR-1225-5p tcTACCCAatggtgc GUGGGUAC m6b Created HHKTA_25990_NM_015335|758|797|2.85568410941597|0.328687470909897
hsa-miR-1229-5p tCTACCCAatggtgc GUGGGUAG m7b Created HHKTA_25990_NM_015335|758|797|2.85568410941597|0.328687470909897
hsa-miR-181c-3p tctaccCGATGGTgc AACCAUCG m7b Disrupted HHKTA_25990_NM_015335|758|797|2.85568410941597|0.328687470909897
hsa-miR-1225-5p tcTACCCAatggtgc GUGGGUAC m6b Created HPCB1_10884_G13554.1_116457670
hsa-miR-1229-5p tCTACCCAatggtgc GUGGGUAG m7b Created HPCB1_10884_G13554.1_116457670
hsa-miR-181c-3p tctaccCGATGGTgc AACCAUCG m7b Disrupted HPCB1_10884_G13554.1_116457670
hsa-miR-1225-5p tcTACCCAatggtgc GUGGGUAC m6b Created HPKTA_16104_G17358.1_116457670
hsa-miR-1229-5p tCTACCCAatggtgc GUGGGUAG m7b Created HPKTA_16104_G17358.1_116457670
hsa-miR-181c-3p tctaccCGATGGTgc AACCAUCG m7b Disrupted HPKTA_16104_G17358.1_116457670
hsa-miR-1225-5p tcTACCCAatggtgc GUGGGUAC m6b Created HPRO6_21753_G25336.1_116457670
hsa-miR-1229-5p tCTACCCAatggtgc GUGGGUAG m7b Created HPRO6_21753_G25336.1_116457670
hsa-miR-181c-3p tctaccCGATGGTgc AACCAUCG m7b Disrupted HPRO6_21753_G25336.1_116457670

Mutation Mutation ID Sample Name Cancer Type
chr12:g.116019851AG>G COSM1359081 TCGA-CM-4746-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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