SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0028578
Gene Symbol: MED13L
Browse Associations

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr12:g.116009095C>T COSM935556 587234 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr12:g.116009015G>A COSM4796339 CHC892T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2113 cttctaaGCACAAAa AUUUGUGC m7b Disrupted HPKTA_16103_G17357.1_116446810
hsa-miR-218-5p cttctAAGCACAAaa UUGUGCUU m8a Disrupted HPKTA_16103_G17357.1_116446810
hsa-miR-5010-3p cttctaaACACAAAa UUUUGUGU m7b Created HPKTA_16103_G17357.1_116446810
hsa-miR-599 cttctaaACACAAaa GUUGUGUC m6b Created HPKTA_16103_G17357.1_116446810
hsa-miR-636 cttctAAGCACAaaa UGUGCUUG m7a Disrupted HPKTA_16103_G17357.1_116446810

Mutation Mutation ID Sample Name Cancer Type
chr12:g.116009007C>T COSM1127542 TCGA-G9-6373-01 [prostate][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-138-2-3p cacaAAATAGCagaa GCUAUUUC m7a Created HPKTA_16103_G17357.1_116446810
hsa-miR-19a-5p caCAAAACagcagaa AGUUUUGC m6b Disrupted HPKTA_16103_G17357.1_116446810
hsa-miR-19b-1-5p caCAAAACagcagaa AGUUUUGC m6b Disrupted HPKTA_16103_G17357.1_116446810
hsa-miR-19b-2-5p caCAAAACagcagaa AGUUUUGC m6b Disrupted HPKTA_16103_G17357.1_116446810
hsa-miR-3692-5p cacaaaaCAGCAGaa CCUGCUGG m6b Disrupted HPKTA_16103_G17357.1_116446810
hsa-miR-6071 cacaaaaCAGCAGAa UUCUGCUG m7b Disrupted HPKTA_16103_G17357.1_116446810
hsa-miR-93-3p cacaaaaCAGCAGaa ACUGCUGA m6b Disrupted HPKTA_16103_G17357.1_116446810

Mutation Mutation ID Sample Name Cancer Type
chr12:g.116008930G>A COSM176447 TCGA-AG-A002-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3187-3p tgTGGCCAAagaatt UUGGCCAU m7a (m6a->m7a) HHKTA_22180_NM_015335|1529|1568|3.28836351993354|0.328687470909897
hsa-miR-4435 tgTGGCCAaagaatt AUGGCCAG m6b Created HHKTA_22180_NM_015335|1529|1568|3.28836351993354|0.328687470909897
hsa-miR-4665-3p tgtGGCCGAagaatt CUCGGCCG m6b Disrupted HHKTA_22180_NM_015335|1529|1568|3.28836351993354|0.328687470909897
hsa-miR-4701-5p tGTGGCCAAagaatt UUGGCCAC m8a (m7a->m8a) HHKTA_22180_NM_015335|1529|1568|3.28836351993354|0.328687470909897
hsa-miR-548s tgTGGCCAaagaatt AUGGCCAA m6b Created HHKTA_22180_NM_015335|1529|1568|3.28836351993354|0.328687470909897
hsa-miR-588 tGTGGCCAAagaatt UUGGCCAC m8a (m7a->m8a) HHKTA_22180_NM_015335|1529|1568|3.28836351993354|0.328687470909897
hsa-miR-9-5p tgtggCCAAAGAatt UCUUUGGU m7a Created HHKTA_22180_NM_015335|1529|1568|3.28836351993354|0.328687470909897

Mutation Mutation ID Sample Name Cancer Type
chr12:g.116008920G>T COSM935554 TCGA-AX-A0J0-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5581-3p gaattatGCATGGAg UUCCAUGC m7b Disrupted HHKTA_22180_NM_015335|1529|1568|3.28836351993354|0.328687470909897
hsa-miR-6872-3p gaattatGCATGGag CCCAUGCC m6b Disrupted HHKTA_22180_NM_015335|1529|1568|3.28836351993354|0.328687470909897
hsa-miR-8060 gaattaTTCATGGag CCAUGAAG m7a Created HHKTA_22180_NM_015335|1529|1568|3.28836351993354|0.328687470909897

Mutation Mutation ID Sample Name Cancer Type
chr12:g.116008899G>C COSM4528148 CSCC-46-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-138-5p aCACCAGCacagaaa AGCUGGUG m7b Created HHKTA_22180_NM_015335|1529|1568|3.28836351993354|0.328687470909897
hsa-miR-4299 aCACCAGCacagaaa GCUGGUGA m7a Created HHKTA_22180_NM_015335|1529|1568|3.28836351993354|0.328687470909897
hsa-miR-4743-3p acaccagGACAGAAa UUUCUGUC m7b Disrupted HHKTA_22180_NM_015335|1529|1568|3.28836351993354|0.328687470909897
hsa-miR-5008-3p acaccAGCACAGaaa CCUGUGCU m7b Created HHKTA_22180_NM_015335|1529|1568|3.28836351993354|0.328687470909897
hsa-miR-548q aCACCAGCacagaaa GCUGGUGC m7a Created HHKTA_22180_NM_015335|1529|1568|3.28836351993354|0.328687470909897
hsa-miR-6131 acACCAGCacagaaa GGCUGGUC m6b Created HHKTA_22180_NM_015335|1529|1568|3.28836351993354|0.328687470909897
hsa-miR-6737-3p acaccAGCACAGAaa UCUGUGCU m8a Created HHKTA_22180_NM_015335|1529|1568|3.28836351993354|0.328687470909897
hsa-miR-676-3p acaccAGGACAGaaa CUGUCCUA m7a Disrupted HHKTA_22180_NM_015335|1529|1568|3.28836351993354|0.328687470909897
hsa-miR-6888-3p acaccagGACAGAaa AUCUGUCU m6b Disrupted HHKTA_22180_NM_015335|1529|1568|3.28836351993354|0.328687470909897
hsa-miR-6889-3p acaccaGCACAGAaa UCUGUGCC m7a Created HHKTA_22180_NM_015335|1529|1568|3.28836351993354|0.328687470909897
hsa-miR-7157-3p acaccAGCACAGAaa UCUGUGCU m8a Created HHKTA_22180_NM_015335|1529|1568|3.28836351993354|0.328687470909897

Mutation Mutation ID Sample Name Cancer Type
chr12:g.116008856G>T COSM1127543 TCGA-CH-5763-01 [prostate][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4305 tagaggTGTCTAGca CCUAGACA m7b Disrupted HHFCT_34775_cluster-5787_37_8
hsa-miR-6508-5p tagaggTTTCTAGca UCUAGAAA m7b Created HHFCT_34775_cluster-5787_37_8
hsa-miR-8067 tagaggTTTCTAGca CCUAGAAA m7b Created HHFCT_34775_cluster-5787_37_8

Mutation Mutation ID Sample Name Cancer Type
chr12:g.116008822G>A COSM1214832 587224 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-124-3p aatggccGTGCCTTc UAAGGCAC m7b Disrupted HHFCT_34775_cluster-5787_37_8
hsa-miR-3177-3p aatgGCCGTGCcttc UGCACGGC m7b Disrupted HHFCT_34775_cluster-5787_37_8
hsa-miR-3187-3p aATGGCCAtgccttc UUGGCCAU m7b Created HHFCT_34775_cluster-5787_37_8
hsa-miR-3622a-5p aatggcCGTGCCTtc CAGGCACG m7b Disrupted HHFCT_34775_cluster-5787_37_8
hsa-miR-3622b-5p aatggCCATGCCTtc AGGCAUGG m8a Created HHFCT_34775_cluster-5787_37_8
hsa-miR-3910 aatggccATGCCTTc AAAGGCAU m7b Created HHFCT_34775_cluster-5787_37_8
hsa-miR-506-3p aatggccGTGCCTTc UAAGGCAC m7b Disrupted HHFCT_34775_cluster-5787_37_8
hsa-miR-564 aatggCCGTGCCTtc AGGCACGG m8a Disrupted HHFCT_34775_cluster-5787_37_8

Mutation Mutation ID Sample Name Cancer Type
chr12:g.116008640G>A COSM3752943 TCGA-AM-5821-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-302f tccAGCAATTgtcta UAAUUGCU m7b Created HHFCT_34774_cluster-5787_36_12
hsa-miR-3692-5p tCCAGCAGttgtcta CCUGCUGG m7b Disrupted HHFCT_34774_cluster-5787_36_12
hsa-miR-549a tccagcAGTTGTCta UGACAACU m7b Disrupted HHFCT_34774_cluster-5787_36_12
hsa-miR-7849-3p tccagCAATTGTCta GACAAUUG m8a Created HHFCT_34774_cluster-5787_36_12
hsa-miR-302f tccAGCAATTgtcta UAAUUGCU m7b Created HHFKP_33565_cluster-5787_45_6
hsa-miR-3692-5p tCCAGCAGttgtcta CCUGCUGG m7b Disrupted HHFKP_33565_cluster-5787_45_6
hsa-miR-549a tccagcAGTTGTCta UGACAACU m7b Disrupted HHFKP_33565_cluster-5787_45_6
hsa-miR-7849-3p tccagCAATTGTCta GACAAUUG m8a Created HHFKP_33565_cluster-5787_45_6

Mutation Mutation ID Sample Name Cancer Type
chr12:g.116008612C>T COSM4472726 CSCC-31-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3131 aactGTCCTCGtagg UCGAGGAC m7b Disrupted HHFCT_34774_cluster-5787_36_12
hsa-miR-5004-5p aacTGTCCTCgtagg UGAGGACA m7b Disrupted HHFCT_34774_cluster-5787_36_12
hsa-miR-611 aactGTCCTCGtagg GCGAGGAC m7b Disrupted HHFCT_34774_cluster-5787_36_12
hsa-miR-3131 aactGTCCTCGtagg UCGAGGAC m7b Disrupted HHFKP_33565_cluster-5787_45_6
hsa-miR-5004-5p aacTGTCCTCgtagg UGAGGACA m7b Disrupted HHFKP_33565_cluster-5787_45_6
hsa-miR-611 aactGTCCTCGtagg GCGAGGAC m7b Disrupted HHFKP_33565_cluster-5787_45_6

Mutation Mutation ID Sample Name Cancer Type
chr12:g.116008610C>T COSM3376132 PCSI_0084_Pa_X [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3131 ctGTCCTCGtaggcc UCGAGGAC m7b (m7b->m6b) HHFCT_34774_cluster-5787_36_12
hsa-miR-5004-5p cTGTCCTCgtaggcc UGAGGACA m7b Disrupted HHFCT_34774_cluster-5787_36_12
hsa-miR-611 ctGTCCTCGtaggcc GCGAGGAC m7b (m7b->m6b) HHFCT_34774_cluster-5787_36_12
hsa-miR-624-3p ctgtCCTTGTaggcc CACAAGGU m6b Created HHFCT_34774_cluster-5787_36_12

Mutation Mutation ID Sample Name Cancer Type
chr12:g.116008433G>T COSM691911 TCGA-66-2789-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-136-5p ccaaAATGGAGgtaa ACUCCAUU m7b Disrupted HHKTA_44847_NM_015335|2009|2048|1.64418175996677|0.328687470909897
hsa-miR-4777-3p ccaaaatTGAGGTAa AUACCUCA m7b Created HHKTA_44847_NM_015335|2009|2048|1.64418175996677|0.328687470909897

Mutation Mutation ID Sample Name Cancer Type
chr12:g.116007596G>T COSM4534160 CSCC-18-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-431-5p ctgGCAAGACAaaca UGUCUUGC m8a Disrupted HHKTA_37251_NM_015335|2105|2144|2.03359322943259|0.328687470909897
hsa-miR-511-5p ctggcAAGACAaaca GUGUCUUU m6b Disrupted HHKTA_37251_NM_015335|2105|2144|2.03359322943259|0.328687470909897

Mutation Mutation ID Sample Name Cancer Type
chr12:g.116007546A>G COSM2173292 LS180 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3689a-5p tgcctcTATCACAac UGUGAUAU m7a Disrupted HHFKP_33564_cluster-5787_44_7
hsa-miR-3689b-5p tgcctcTATCACAac UGUGAUAU m7a Disrupted HHFKP_33564_cluster-5787_44_7
hsa-miR-3689e tgcctcTATCACAac UGUGAUAU m7a Disrupted HHFKP_33564_cluster-5787_44_7
hsa-miR-3689f tgcctcTATCACAac UGUGAUAU m7a Disrupted HHFKP_33564_cluster-5787_44_7
hsa-miR-4504 tgcctcTGTCACAac UGUGACAA m7a Created HHFKP_33564_cluster-5787_44_7
hsa-miR-4797-5p tgcCTCTGTCacaac GACAGAGU m7a Created HHFKP_33564_cluster-5787_44_7
hsa-miR-542-3p tgcctCTGTCACAac UGUGACAG m8a Created HHFKP_33564_cluster-5787_44_7
hsa-miR-6808-3p tgcctctGTCACAac GUGUGACC m6b Created HHFKP_33564_cluster-5787_44_7
hsa-miR-6866-5p tGCCTCTAtcacaac UUAGAGGC m7b Disrupted HHFKP_33564_cluster-5787_44_7
hsa-miR-758-3p tgcctctGTCACAAc UUUGUGAC m7b Created HHFKP_33564_cluster-5787_44_7
hsa-miR-8070 tgcctctATCACAac AUGUGAUU m6b Disrupted HHFKP_33564_cluster-5787_44_7
Mutation Mutation ID Sample Name Cancer Type
chr12:g.116007488G>A COSM4701477 T3202 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr12:g.116007485G>A COSM3710554 2T [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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