SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0028573
Gene Symbol: MED13L
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.116006346G>A COSM1359078 TCGA-A6-5665-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4446-5p ctgatGGGAAAaatg AUUUCCCU m6b Disrupted HHKTA_36258_NM_015335|2358|2397|2.07686117048434|0.328687470909897
hsa-miR-587 ctgATGGAAAaaatg UUUCCAUA m7a Created HHKTA_36258_NM_015335|2358|2397|2.07686117048434|0.328687470909897
hsa-miR-6884-3p cTGATGGGaaaaatg CCCAUCAC m7a Disrupted HHKTA_36258_NM_015335|2358|2397|2.07686117048434|0.328687470909897

Mutation Mutation ID Sample Name Cancer Type
chr12:g.116006340T>G COSM1359077 TCGA-CA-6717-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1256 ggaaaAATGCCatgt AGGCAUUG m6b Disrupted HHKTA_36258_NM_015335|2358|2397|2.07686117048434|0.328687470909897
hsa-miR-153-5p ggAAAAATGccatgt UCAUUUUU m7b (m7b->m6b) HHKTA_36258_NM_015335|2358|2397|2.07686117048434|0.328687470909897

Mutation Mutation ID Sample Name Cancer Type
chr12:g.116005986G>T COSM1257561 ESO-866 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3687 aTGTCCGGcaggata CCCGGACA m7b Disrupted HHFCT_34771_cluster-5787_32_17
hsa-miR-378a-5p atgtccGTCAGGAta CUCCUGAC m7b Created HHFCT_34771_cluster-5787_32_17
hsa-miR-4442 aTGTCCGGCaggata GCCGGACA m8a (m8a->m7a) HHFCT_34771_cluster-5787_32_17
hsa-miR-4722-3p atgtccGGCAGGata ACCUGCCA m6b Disrupted HHFCT_34771_cluster-5787_32_17

Mutation Mutation ID Sample Name Cancer Type
chr12:g.116005968C>T COSM201753 TCGA-AA-3845-01 [large_intestine][colon][NS][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1202 ctGCTGGCAgagctg GUGCCAGC m7b (m7b->m6b) HHFCT_34771_cluster-5787_32_17
hsa-miR-3194-3p ctgctgGCAGAGCTg AGCUCUGC m8a Disrupted HHFCT_34771_cluster-5787_32_17
hsa-miR-3194-5p ctGCTGGCagagctg GGCCAGCC m6b Disrupted HHFCT_34771_cluster-5787_32_17
hsa-miR-3972 ctGCTGGCAGagctg CUGCCAGC m8a Disrupted HHFCT_34771_cluster-5787_32_17
hsa-miR-4727-5p ctgcTGGCAGAgctg AUCUGCCA m7b Disrupted HHFCT_34771_cluster-5787_32_17
hsa-miR-634 cTGCTGGTagagctg AACCAGCA m7b Created HHFCT_34771_cluster-5787_32_17

Mutation Mutation ID Sample Name Cancer Type
chr12:g.116005964G>A COSM935549 TCGA-AP-A0LM-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-148b-5p tggCAGAACTggctc AAGUUCUG m7b Created HHFCT_34771_cluster-5787_32_17
hsa-miR-3194-3p tgGCAGAGCTggctc AGCUCUGC m8a Disrupted HHFCT_34771_cluster-5787_32_17
hsa-miR-4267 tggcaGAGCTGGctc UCCAGCUC m7b Disrupted HHFCT_34771_cluster-5787_32_17
hsa-miR-4277 tggcAGAACTGgctc GCAGUUCU m7b Created HHFCT_34771_cluster-5787_32_17
hsa-miR-4676-5p tggcagaACTGGCTc GAGCCAGU m7b Created HHFCT_34771_cluster-5787_32_17
hsa-miR-575 tggcagaACTGGCTc GAGCCAGU m7b Created HHFCT_34771_cluster-5787_32_17
hsa-miR-6738-3p tGGCAGAActggctc CUUCUGCC m7b Created HHFCT_34771_cluster-5787_32_17
hsa-miR-6858-3p tggcagaGCTGGCTc CAGCCAGC m7b Disrupted HHFCT_34771_cluster-5787_32_17
hsa-miR-6874-3p tggCAGAACTGgctc CAGUUCUG m8a Created HHFCT_34771_cluster-5787_32_17

Mutation Mutation ID Sample Name Cancer Type
chr12:g.116005947T>C COSM2173282 DLD1 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3188 gtAGCCTCacacagg AGAGGCUU m6b Created HHFCT_34771_cluster-5787_32_17
hsa-miR-3975 gTAGCCTCAcacagg UGAGGCUA m8a (m7a->m8a) HHFCT_34771_cluster-5787_32_17
hsa-miR-4316 gtaGCCTCACacagg GGUGAGGC m7b Created HHFCT_34771_cluster-5787_32_17
hsa-miR-485-5p gtAGCCTCacacagg AGAGGCUG m6b Created HHFCT_34771_cluster-5787_32_17
hsa-miR-6765-5p gtaGCCTCACacagg GUGAGGCG m7a Created HHFCT_34771_cluster-5787_32_17
hsa-miR-6818-5p gtagccTCACACAgg UUGUGUGA m7b Created HHFCT_34771_cluster-5787_32_17
hsa-miR-6884-5p gtAGCCTCacacagg AGAGGCUG m6b Created HHFCT_34771_cluster-5787_32_17

Mutation Mutation ID Sample Name Cancer Type
chr12:g.116005919C>T COSM337322 LUAD-D01603 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1909-3p accttCCCTGCatga CGCAGGGG m6b Disrupted HHFCT_34771_cluster-5787_32_17
hsa-miR-211-3p acctTCCCTGCatga GCAGGGAC m7a Disrupted HHFCT_34771_cluster-5787_32_17
hsa-miR-4476 aCCTTCCTtgcatga CAGGAAGG m7b Created HHFCT_34771_cluster-5787_32_17
hsa-miR-4708-3p accttCCTTGCatga AGCAAGGC m6b Created HHFCT_34771_cluster-5787_32_17
hsa-miR-4747-5p aCCTTCCCTgcatga AGGGAAGG m8a (m8a->m7a) HHFCT_34771_cluster-5787_32_17
hsa-miR-5196-5p aCCTTCCCTgcatga AGGGAAGG m8a (m8a->m7a) HHFCT_34771_cluster-5787_32_17
hsa-miR-6132 accttCCCTGCatga AGCAGGGC m6b Disrupted HHFCT_34771_cluster-5787_32_17
hsa-miR-6830-5p accTTCCTTGcatga CCAAGGAA m7b Created HHFCT_34771_cluster-5787_32_17
hsa-miR-6836-5p accttCCCTGCatga CGCAGGGC m6b Disrupted HHFCT_34771_cluster-5787_32_17
hsa-miR-6876-5p aCCTTCCTtgcatga CAGGAAGG m7b Created HHFCT_34771_cluster-5787_32_17
hsa-miR-9500 acCTTCCCTgcatga AAGGGAAG m7b (m7b->m6b) HHFCT_34771_cluster-5787_32_17

Mutation Mutation ID Sample Name Cancer Type
chr12:g.115997101G>A COSM4643655 LIM2551 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-296-3p atggagAACCCTatg GAGGGUUG m6b Created HHFCT_34769_cluster-5787_30_8
hsa-miR-3158-3p atggagAGCCCTatg AAGGGCUU m6b Disrupted HHFCT_34769_cluster-5787_30_8
hsa-miR-4446-3p atggagAGCCCTatg CAGGGCUG m6b Disrupted HHFCT_34769_cluster-5787_30_8
hsa-miR-5088-5p atggaGAGCCCTatg CAGGGCUC m7b Disrupted HHFCT_34769_cluster-5787_30_8
hsa-miR-597-3p atgGAGAACCctatg UGGUUCUC m7b Created HHFCT_34769_cluster-5787_30_8

Mutation Mutation ID Sample Name Cancer Type
chr12:g.115997032G>T COSM4385994 262T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3122 ttaggaaGTCCCAAg GUUGGGAC m7b Disrupted HHFKP_33561_cluster-5787_41_14
hsa-miR-3199 ttaggaAGTCCCaag AGGGACUG m6b Disrupted HHFKP_33561_cluster-5787_41_14
hsa-miR-365a-5p ttaggAAGTCCCaag AGGGACUU m7b Disrupted HHFKP_33561_cluster-5787_41_14
hsa-miR-365b-5p ttaggAAGTCCCaag AGGGACUU m7b Disrupted HHFKP_33561_cluster-5787_41_14
hsa-miR-3913-5p ttaggaaGTCCCAAg UUUGGGAC m7b Disrupted HHFKP_33561_cluster-5787_41_14
hsa-miR-4298 ttaggaaGTCCCAag CUGGGACA m6b Disrupted HHFKP_33561_cluster-5787_41_14
hsa-miR-450a-1-3p ttaggaaTTCCCAAg AUUGGGAA m7b Created HHFKP_33561_cluster-5787_41_14
hsa-miR-617 ttaGGAAGTCccaag AGACUUCC m7b Disrupted HHFKP_33561_cluster-5787_41_14
hsa-miR-6716-5p ttaggaATTCCCAag UGGGAAUG m7a Created HHFKP_33561_cluster-5787_41_14
hsa-miR-8052 ttaggaAGTCCCaag CGGGACUG m6b Disrupted HHFKP_33561_cluster-5787_41_14

Mutation Mutation ID Sample Name Cancer Type
chr12:g.115996674C>A COSM3456611 TCGA-DA-A1I5-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5580-3p gacttttCATATGTg CACAUAUG m7b Disrupted HPKTA_16102_G17356.1_116434474
hsa-miR-5580-3p gacttttCATATGTg CACAUAUG m7b Disrupted HPRO6_21751_G25334.1_116434474

Mutation Mutation ID Sample Name Cancer Type
chr12:g.115996608T>G COSM1662736 ccRCC-19 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-196a-3p ctgaagaTGTTGCCg CGGCAACA m7b Disrupted HHFKP_33560_cluster-5787_40_24
hsa-miR-6515-3p cTGAAGAGgttgccg UCUCUUCA m7b Created HHFKP_33560_cluster-5787_40_24
hsa-miR-877-3p ctGAAGAGGttgccg UCCUCUUC m7b (m6b->m7b) HHFKP_33560_cluster-5787_40_24
hsa-miR-196a-3p ctgaagaTGTTGCCg CGGCAACA m7b Disrupted HHHNA_6104_MED13L|NM_015335|exon_CDS|-6.9153321722182|1.42331876731146
hsa-miR-6515-3p cTGAAGAGgttgccg UCUCUUCA m7b Created HHHNA_6104_MED13L|NM_015335|exon_CDS|-6.9153321722182|1.42331876731146
hsa-miR-877-3p ctGAAGAGGttgccg UCCUCUUC m7b (m6b->m7b) HHHNA_6104_MED13L|NM_015335|exon_CDS|-6.9153321722182|1.42331876731146
hsa-miR-196a-3p ctgaagaTGTTGCCg CGGCAACA m7b Disrupted HHHSA_6104_MED13L|NM_015335|exon_CDS|-6.9153321722182|1.42331876731146
hsa-miR-6515-3p cTGAAGAGgttgccg UCUCUUCA m7b Created HHHSA_6104_MED13L|NM_015335|exon_CDS|-6.9153321722182|1.42331876731146
hsa-miR-877-3p ctGAAGAGGttgccg UCCUCUUC m7b (m6b->m7b) HHHSA_6104_MED13L|NM_015335|exon_CDS|-6.9153321722182|1.42331876731146

Mutation Mutation ID Sample Name Cancer Type
chr12:g.115996601G>A COSM3416519 TCGA-F5-6814-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-135a-5p tgttgccAAGCCATt UAUGGCUU m7b Created HHFKP_33560_cluster-5787_40_24
hsa-miR-135b-5p tgttgccAAGCCATt UAUGGCUU m7b Created HHFKP_33560_cluster-5787_40_24
hsa-miR-182-5p tgTTGCCAAgccatt UUUGGCAA m7b (m6b->m7b) HHFKP_33560_cluster-5787_40_24
hsa-miR-196a-3p TGTTGCCGagccatt CGGCAACA m8a Disrupted HHFKP_33560_cluster-5787_40_24
hsa-miR-135a-5p tgttgccAAGCCATt UAUGGCUU m7b Created HHHNA_6104_MED13L|NM_015335|exon_CDS|-6.9153321722182|1.42331876731146
hsa-miR-135b-5p tgttgccAAGCCATt UAUGGCUU m7b Created HHHNA_6104_MED13L|NM_015335|exon_CDS|-6.9153321722182|1.42331876731146
hsa-miR-182-5p tgTTGCCAAgccatt UUUGGCAA m7b (m6b->m7b) HHHNA_6104_MED13L|NM_015335|exon_CDS|-6.9153321722182|1.42331876731146
hsa-miR-196a-3p TGTTGCCGagccatt CGGCAACA m8a Disrupted HHHNA_6104_MED13L|NM_015335|exon_CDS|-6.9153321722182|1.42331876731146
hsa-miR-135a-5p tgttgccAAGCCATt UAUGGCUU m7b Created HHHSA_6104_MED13L|NM_015335|exon_CDS|-6.9153321722182|1.42331876731146
hsa-miR-135b-5p tgttgccAAGCCATt UAUGGCUU m7b Created HHHSA_6104_MED13L|NM_015335|exon_CDS|-6.9153321722182|1.42331876731146
hsa-miR-182-5p tgTTGCCAAgccatt UUUGGCAA m7b (m6b->m7b) HHHSA_6104_MED13L|NM_015335|exon_CDS|-6.9153321722182|1.42331876731146
hsa-miR-196a-3p TGTTGCCGagccatt CGGCAACA m8a Disrupted HHHSA_6104_MED13L|NM_015335|exon_CDS|-6.9153321722182|1.42331876731146

Mutation Mutation ID Sample Name Cancer Type
chr12:g.115996563G>A COSM935545 TCGA-A5-A0GH-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1324 gatgcCTGTCTGttt CCAGACAG m7b Disrupted HHFKP_33560_cluster-5787_40_24
hsa-miR-4524b-3p gatgCCTGTCTgttt GAGACAGG m7b Disrupted HHFKP_33560_cluster-5787_40_24

Mutation Mutation ID Sample Name Cancer Type
chr12:g.115996555C>T COSM935544 TCGA-D1-A17Q-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3926 tctgtTTTGGCCttc UGGCCAAA m7b Created HHFKP_33559_cluster-5787_39_8
hsa-miR-4753-5p tctgtttTGGCCTTc CAAGGCCA m7b Created HHFKP_33559_cluster-5787_39_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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