SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0028565
Gene Symbol: MED13L
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.115983499A>G COSM935532 PCSI_0083_Pa_P_526 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6826-5p CCTATTGAtaccacc UCAAUAGG m8a Disrupted HPRO6_21749_G25332.1_116421284
hsa-miR-1263 cctattGGTACCAcc AUGGUACC m7b Created HPRO6_21749_G25332.1_116421284
Mutation Mutation ID Sample Name Cancer Type
chr12:g.115983498T>C COSM201741 TCGA-AA-A01Q-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr12:g.115983331G>A COSM3720500 PD9415a [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][myelofibrosis]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-28-3p tgcATCTAGTtcctc CACUAGAU m7b Created HHFKP_33554_cluster-5787_33_11
hsa-miR-3914 tgcatctGGTTCCTc AAGGAACC m7b Disrupted HHFKP_33554_cluster-5787_33_11
hsa-miR-708-3p tgcaTCTAGTTcctc CAACUAGA m7b Created HHFKP_33554_cluster-5787_33_11

Mutation Mutation ID Sample Name Cancer Type
chr12:g.115983328T>A COSM1581218 DLBCL1021 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][diffuse_large_B_cell_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6847-5p atctggtTCCTCTGt ACAGAGGA m7b Disrupted HHFKP_33554_cluster-5787_33_11
hsa-miR-6859-5p atctggTTCCTCTgt GAGAGGAA m7b Disrupted HHFKP_33554_cluster-5787_33_11
hsa-miR-3125 atctggTTCCTCTgt UAGAGGAA m7b Disrupted HHFKP_33554_cluster-5787_33_11
hsa-miR-3914 atctGGTTCCTctgt AAGGAACC m7b Disrupted HHFKP_33554_cluster-5787_33_11
hsa-miR-3916 atctggTTCCTCTgt AAGAGGAA m7b Disrupted HHFKP_33554_cluster-5787_33_11
hsa-miR-3928-3p atctgGTTCCTCtgt GGAGGAAC m7b Disrupted HHFKP_33554_cluster-5787_33_11
hsa-miR-4257 atctggtACCTCTGt CCAGAGGU m7b Created HHFKP_33554_cluster-5787_33_11

Mutation Mutation ID Sample Name Cancer Type
chr12:g.115982483GGAC>C COSM1359072 TCGA-CK-5916-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4309 cagagGACTCCActt CUGGAGUC m7b Created HHKTA_17137_NM_015335|5111|5150|4.19699028202044|0.328687470909897
hsa-miR-3909 cAGAGGACtccactt UGUCCUCU m7b Created HHKTA_17137_NM_015335|5111|5150|4.19699028202044|0.328687470909897
hsa-miR-3198 cagagGACTCCACtt GUGGAGUC m8a Created HHKTA_17137_NM_015335|5111|5150|4.19699028202044|0.328687470909897
hsa-miR-1289 cagaggaGGACTCCActt UGGAGUCC m8a Disrupted HHKTA_17137_NM_015335|5111|5150|4.19699028202044|0.328687470909897
hsa-miR-5193 caGAGGAGGActccactt UCCUCCUC m8a Disrupted HHKTA_17137_NM_015335|5111|5150|4.19699028202044|0.328687470909897
hsa-miR-660-3p cagAGGAGGactccactt ACCUCCUG m6b Disrupted HHKTA_17137_NM_015335|5111|5150|4.19699028202044|0.328687470909897
hsa-miR-6780a-3p CAGAGGAGgactccactt CUCCUCUG m8a Disrupted HHKTA_17137_NM_015335|5111|5150|4.19699028202044|0.328687470909897
hsa-miR-6852-3p cAGAGGACtccactt UGUCCUCU m7b Created HHKTA_17137_NM_015335|5111|5150|4.19699028202044|0.328687470909897

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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