SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0028564
Gene Symbol: MED13L
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.115980854G>A COSM3700216 RK134_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6757-3p attttCAGTGTactg AACACUGG m6b Disrupted HHFKP_33551_cluster-5787_30_26
hsa-miR-6757-3p attttCAGTGTactg AACACUGG m6b Disrupted HHRBL_4030_BCBL1-2of3-SCL_13470

Mutation Mutation ID Sample Name Cancer Type
chr12:g.115980806T>C COSM1581217 DLBCL689 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][diffuse_large_B_cell_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1914-3p cattaaACCCCTCac GGAGGGGU m7b Created HHKTA_26793_NM_015335|5339|5378|2.76914822731245|0.328687470909897
hsa-miR-193b-5p cattAAACCCCtcac CGGGGUUU m7b Created HHKTA_26793_NM_015335|5339|5378|2.76914822731245|0.328687470909897
hsa-miR-5194 cattaaACCCCTCAc UGAGGGGU m8a Created HHKTA_26793_NM_015335|5339|5378|2.76914822731245|0.328687470909897
hsa-miR-629-5p catTAAACCCctcac UGGGUUUA m7b Created HHKTA_26793_NM_015335|5339|5378|2.76914822731245|0.328687470909897
hsa-miR-6734-5p cattaaaCCCCTCAc UUGAGGGG m7b Created HHKTA_26793_NM_015335|5339|5378|2.76914822731245|0.328687470909897
hsa-miR-6738-5p cattaaACCCCTCac CGAGGGGU m7b Created HHKTA_26793_NM_015335|5339|5378|2.76914822731245|0.328687470909897
hsa-miR-6834-5p cattaaaTCCCTCAc GUGAGGGA m7b Disrupted HHKTA_26793_NM_015335|5339|5378|2.76914822731245|0.328687470909897
hsa-miR-1914-3p cattaaACCCCTCac GGAGGGGU m7b Created HPCB1_10878_G13547.1_116418600
hsa-miR-193b-5p cattAAACCCCtcac CGGGGUUU m7b Created HPCB1_10878_G13547.1_116418600
hsa-miR-5194 cattaaACCCCTCAc UGAGGGGU m8a Created HPCB1_10878_G13547.1_116418600
hsa-miR-629-5p catTAAACCCctcac UGGGUUUA m7b Created HPCB1_10878_G13547.1_116418600
hsa-miR-6734-5p cattaaaCCCCTCAc UUGAGGGG m7b Created HPCB1_10878_G13547.1_116418600
hsa-miR-6738-5p cattaaACCCCTCac CGAGGGGU m7b Created HPCB1_10878_G13547.1_116418600
hsa-miR-6834-5p cattaaaTCCCTCAc GUGAGGGA m7b Disrupted HPCB1_10878_G13547.1_116418600

Mutation Mutation ID Sample Name Cancer Type
chr12:g.115980799C>T COSM4701473 T578 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6834-5p TCCCTCACgggattt GUGAGGGA m8a Disrupted HHKTA_26793_NM_015335|5339|5378|2.76914822731245|0.328687470909897
hsa-miR-6834-5p TCCCTCACgggattt GUGAGGGA m8a Disrupted HPCB1_10878_G13547.1_116418600

Mutation Mutation ID Sample Name Cancer Type
chr12:g.115980793T>C COSM935529 TCGA-BS-A0UJ-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3136-3p acgggatTTGGGCCt UGGCCCAA m7b Disrupted HHKTA_26793_NM_015335|5339|5378|2.76914822731245|0.328687470909897
hsa-miR-605-5p acGGGATTTgggcct UAAAUCCC m7b (m7b->m6b) HHKTA_26793_NM_015335|5339|5378|2.76914822731245|0.328687470909897
hsa-miR-7155-3p acgggatTTGGGCCt UGGCCCAA m7b Disrupted HHKTA_26793_NM_015335|5339|5378|2.76914822731245|0.328687470909897
hsa-miR-3136-3p acgggatTTGGGCCt UGGCCCAA m7b Disrupted HPCB1_10878_G13547.1_116418600
hsa-miR-605-5p acGGGATTTgggcct UAAAUCCC m7b (m7b->m6b) HPCB1_10878_G13547.1_116418600
hsa-miR-7155-3p acgggatTTGGGCCt UGGCCCAA m7b Disrupted HPCB1_10878_G13547.1_116418600

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser