SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0028563
Gene Symbol: MED13L
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.115975549G>C COSM162436 AOCS-152-1-X [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3686 attaTTACAGAcctg AUCUGUAA m7b Created HHFCT_34762_cluster-5787_23_16
hsa-miR-7107-3p attattACAGACCtg UGGUCUGU m7b Created HHFCT_34762_cluster-5787_23_16
hsa-miR-6753-3p attattACAGACCtg UGGUCUGU m7b Created HHFCT_34762_cluster-5787_23_16
hsa-miR-520f-5p attaTTAGAGacctg CCUCUAAA m6b Disrupted HHFCT_34762_cluster-5787_23_16
hsa-miR-3607-3p attaTTACAGacctg ACUGUAAA m6b Created HHFCT_34762_cluster-5787_23_16
hsa-miR-2054 atTATTACAGacctg CUGUAAUA m8a Created HHFCT_34762_cluster-5787_23_16

Mutation Mutation ID Sample Name Cancer Type
chr12:g.115975540G>A COSM1359071 TCGA-AZ-6601-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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