SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0028549
Gene Symbol: MED13L
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.115961360C>T COSM393083 ESCC-003T [oesophagus][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5589-3p tggctCATGTGCAat UGCACAUG m8a Created HHKTA_37252_NM_015335|6593|6632|2.03359322943259|0.328687470909897

Mutation Mutation ID Sample Name Cancer Type
chr12:g.115961350G>T COSM1511036 TCGA-78-7542-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4722-5p gcaaTCCTGCCaccc GGCAGGAG m7a Created HHKTA_37252_NM_015335|6593|6632|2.03359322943259|0.328687470909897
hsa-miR-4736 gcaatCCTGCCaccc AGGCAGGU m6b Created HHKTA_37252_NM_015335|6593|6632|2.03359322943259|0.328687470909897
hsa-miR-4743-5p gcaaTCCGGCCAccc UGGCCGGA m8a Disrupted HHKTA_37252_NM_015335|6593|6632|2.03359322943259|0.328687470909897
hsa-miR-4763-3p gcaatCCTGCCaccc AGGCAGGG m6b Created HHKTA_37252_NM_015335|6593|6632|2.03359322943259|0.328687470909897
hsa-miR-7150 gcaatCCTGCCAccc CUGGCAGG m7b Created HHKTA_37252_NM_015335|6593|6632|2.03359322943259|0.328687470909897

Mutation Mutation ID Sample Name Cancer Type
chr12:g.115961350G>A COSM4039081 TCGA-HU-A4GX-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1287-5p gcaATCCAGCcaccc UGCUGGAU m7b Created HHKTA_37252_NM_015335|6593|6632|2.03359322943259|0.328687470909897
hsa-miR-3135b gcaaTCCAGCCaccc GGCUGGAG m7a Created HHKTA_37252_NM_015335|6593|6632|2.03359322943259|0.328687470909897
hsa-miR-3652 gcaaTCCAGCCaccc CGGCUGGA m7b Created HHKTA_37252_NM_015335|6593|6632|2.03359322943259|0.328687470909897
hsa-miR-378j gcAATCCAGccaccc ACUGGAUU m7b (m6b->m7b) HHKTA_37252_NM_015335|6593|6632|2.03359322943259|0.328687470909897
hsa-miR-4430 gcaaTCCAGCCaccc AGGCUGGA m7b Created HHKTA_37252_NM_015335|6593|6632|2.03359322943259|0.328687470909897
hsa-miR-4505 gcaatCCAGCCaccc AGGCUGGG m6b Created HHKTA_37252_NM_015335|6593|6632|2.03359322943259|0.328687470909897
hsa-miR-4743-5p gcaaTCCGGCCAccc UGGCCGGA m8a Disrupted HHKTA_37252_NM_015335|6593|6632|2.03359322943259|0.328687470909897
hsa-miR-5787 gcaatCCAGCCaccc GGGCUGGG m6b Created HHKTA_37252_NM_015335|6593|6632|2.03359322943259|0.328687470909897
hsa-miR-6839-5p gcAATCCAGccaccc UCUGGAUU m7b (m6b->m7b) HHKTA_37252_NM_015335|6593|6632|2.03359322943259|0.328687470909897
hsa-miR-6842-3p gcaatCCAGCCAccc UUGGCUGG m7b Created HHKTA_37252_NM_015335|6593|6632|2.03359322943259|0.328687470909897

Mutation Mutation ID Sample Name Cancer Type
chr12:g.115961330C>T COSM4504100 CSCC-56-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1910-3p cgtacttTCTGCCTt GAGGCAGA m7b Created HHKTA_37252_NM_015335|6593|6632|2.03359322943259|0.328687470909897
hsa-miR-6511a-5p cgtacttTCTGCCTt CAGGCAGA m7b Created HHKTA_37252_NM_015335|6593|6632|2.03359322943259|0.328687470909897
hsa-miR-6808-5p cgtacttCCTGCCTt CAGGCAGG m7b Disrupted HHKTA_37252_NM_015335|6593|6632|2.03359322943259|0.328687470909897
hsa-miR-6893-5p cgtacttCCTGCCTt CAGGCAGG m7b Disrupted HHKTA_37252_NM_015335|6593|6632|2.03359322943259|0.328687470909897
hsa-miR-8054 cGTACTTTCtgcctt GAAAGUAC m8a (m7a->m8a) HHKTA_37252_NM_015335|6593|6632|2.03359322943259|0.328687470909897
hsa-miR-940 cgtacttCCTGCCTt AAGGCAGG m7b Disrupted HHKTA_37252_NM_015335|6593|6632|2.03359322943259|0.328687470909897

Mutation Mutation ID Sample Name Cancer Type
chr12:g.115961089T>C COSN7311957 8016470 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-514a-5p aCCAGAGTgactcct UACUCUGG m7b Disrupted HHKTA_18578_NM_015335|6849|6888|3.89411469465814|0.328687470909897
hsa-miR-668-3p accaGAGTGACtcct UGUCACUC m7b Disrupted HHKTA_18578_NM_015335|6849|6888|3.89411469465814|0.328687470909897
hsa-miR-6794-3p accAGAGTGActcct CUCACUCU m7b Disrupted HHKTA_18578_NM_015335|6849|6888|3.89411469465814|0.328687470909897
hsa-miR-6812-3p accAGAGCGactcct CCGCUCUU m6b Created HHKTA_18578_NM_015335|6849|6888|3.89411469465814|0.328687470909897

Mutation Mutation ID Sample Name Cancer Type
chr12:g.115960775C>T COSN8538480 tumor_4166706 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4517 ttTCATATTggggtt AAAUAUGA m7b (m6b->m7b) HHFCT_34755_cluster-5787_15_13
hsa-miR-4517 ttTCATATTggggtt AAAUAUGA m7b (m6b->m7b) HHFKP_33543_cluster-5787_22_12

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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