SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0002770
Gene Symbol: MDM2
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.68836692T>C COSM1562483 TCGA-CL-5918-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1254 ctgtgtaCCAGGCag AGCCUGGA m6b Created HHFKP_36867_cluster-5053_6_131
hsa-miR-150-3p ctgTGTACCAGgcag CUGGUACA m8a Created HHFKP_36867_cluster-5053_6_131
hsa-miR-1254 ctgtgtaCCAGGCag AGCCUGGA m6b Created HHFKP_36867_cluster-5053_6_131
hsa-miR-150-3p ctgTGTACCAGgcag CUGGUACA m8a Created HHFKP_36867_cluster-5053_6_131

Mutation Mutation ID Sample Name Cancer Type
chr12:g.68836691A>G COSM1363874 TCGA-AZ-6608-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4672 aCTGTGTAtcaggca UUACACAG m7b Disrupted HHFKP_36867_cluster-5053_6_131
hsa-miR-642a-3p actgTGTGTCaggca AGACACAU m6b Created HHFKP_36867_cluster-5053_6_131
hsa-miR-642b-3p actgTGTGTCaggca AGACACAU m6b Created HHFKP_36867_cluster-5053_6_131
hsa-miR-6730-3p actgtGTGTCAGGca CCUGACAC m8a Created HHFKP_36867_cluster-5053_6_131
hsa-miR-8485 acTGTGTGTcaggca CACACACA m7b (m6b->m7b) HHFKP_36867_cluster-5053_6_131
hsa-miR-4672 aCTGTGTAtcaggca UUACACAG m7b Disrupted HHFKP_36867_cluster-5053_6_131
hsa-miR-642a-3p actgTGTGTCaggca AGACACAU m6b Created HHFKP_36867_cluster-5053_6_131
hsa-miR-642b-3p actgTGTGTCaggca AGACACAU m6b Created HHFKP_36867_cluster-5053_6_131
hsa-miR-6730-3p actgtGTGTCAGGca CCUGACAC m8a Created HHFKP_36867_cluster-5053_6_131
hsa-miR-8485 acTGTGTGTcaggca CACACACA m7b (m6b->m7b) HHFKP_36867_cluster-5053_6_131

Mutation Mutation ID Sample Name Cancer Type
chr12:g.68836690T>C COSM35414 TCGA-02-0085-01 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3681-3p tACTGTGTatcaggc ACACAGUG m7a Disrupted HHFKP_36867_cluster-5053_6_131
hsa-miR-4672 taCTGTGTAtcaggc UUACACAG m7b (m7b->m6b) HHFKP_36867_cluster-5053_6_131
hsa-miR-6768-5p taCTGTGTatcaggc CACACAGG m6b Disrupted HHFKP_36867_cluster-5053_6_131
hsa-miR-3681-3p tACTGTGTatcaggc ACACAGUG m7a Disrupted HHFKP_36867_cluster-5053_6_131
hsa-miR-4672 taCTGTGTAtcaggc UUACACAG m7b (m7b->m6b) HHFKP_36867_cluster-5053_6_131
hsa-miR-6768-5p taCTGTGTatcaggc CACACAGG m6b Disrupted HHFKP_36867_cluster-5053_6_131

Mutation Mutation ID Sample Name Cancer Type
chr12:g.68836684A>C COSM4044449 TCGA-BR-8365-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3681-3p tcaagttACTGTGTa ACACAGUG m7a Disrupted HHFKP_36867_cluster-5053_6_131
hsa-miR-6768-5p tcaagttCCTGTGTa CACACAGG m7b Created HHFKP_36867_cluster-5053_6_131
hsa-miR-873-5p tcaaGTTCCTGtgta GCAGGAAC m7b Created HHFKP_36867_cluster-5053_6_131
hsa-miR-3681-3p tcaagttACTGTGTa ACACAGUG m7a Disrupted HHFKP_36867_cluster-5053_6_131
hsa-miR-6768-5p tcaagttCCTGTGTa CACACAGG m7b Created HHFKP_36867_cluster-5053_6_131
hsa-miR-873-5p tcaaGTTCCTGtgta GCAGGAAC m7b Created HHFKP_36867_cluster-5053_6_131

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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