SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0047679
Gene Symbol: MBD1
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr18:g.50275858C>T COSM1480362 TCGA-E2-A15K-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-103a-3p acggagATGCTGCct AGCAGCAU m7b Created HHFKP_66612_cluster-11037_4_203
hsa-miR-107 acggagATGCTGCct AGCAGCAU m7b Created HHFKP_66612_cluster-11037_4_203
hsa-miR-885-3p acggagaCGCTGCCt AGGCAGCG m7b Disrupted HHFKP_66612_cluster-11037_4_203
hsa-miR-103a-3p acggagATGCTGCct AGCAGCAU m7b Created HHFKP_66612_cluster-11037_4_203
hsa-miR-107 acggagATGCTGCct AGCAGCAU m7b Created HHFKP_66612_cluster-11037_4_203
hsa-miR-885-3p acggagaCGCTGCCt AGGCAGCG m7b Disrupted HHFKP_66612_cluster-11037_4_203
hsa-miR-885-3p acggagaCGCTGCCt AGGCAGCG m7b Disrupted HHFKP_66612_cluster-11037_4_203
hsa-miR-103a-3p acggagATGCTGCct AGCAGCAU m7b Created HHFKP_66612_cluster-11037_4_203
hsa-miR-107 acggagATGCTGCct AGCAGCAU m7b Created HHFKP_66612_cluster-11037_4_203
hsa-miR-885-3p acggagaCGCTGCCt AGGCAGCG m7b Disrupted HHFKP_66612_cluster-11037_4_203
hsa-miR-103a-3p acggagATGCTGCct AGCAGCAU m7b Created HHFKP_66612_cluster-11037_4_203
hsa-miR-107 acggagATGCTGCct AGCAGCAU m7b Created HHFKP_66612_cluster-11037_4_203
Mutation Mutation ID Sample Name Cancer Type
chr18:g.50275126G>T COSM4153983 C0035T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr18:g.50273773C>T COSM3378515 PCSI_0083_Pa_P [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1910-3p cTCTGCCTgacggca GAGGCAGA m7b Created HPRO6_36723_G43502.1_47800144
hsa-miR-2682-5p ctCTGCCTGacggca CAGGCAGU m7a (m6a->m7a) HPRO6_36723_G43502.1_47800144
hsa-miR-4269 ctcTGCCTGacggca GCAGGCAC m6b Created HPRO6_36723_G43502.1_47800144
hsa-miR-4514 ctCTGCCTGacggca ACAGGCAG m7b (m6b->m7b) HPRO6_36723_G43502.1_47800144
hsa-miR-4692 ctCTGCCTGAcggca UCAGGCAG m8a Created HPRO6_36723_G43502.1_47800144
hsa-miR-6511a-5p cTCTGCCTGacggca CAGGCAGA m8a (m7a->m8a) HPRO6_36723_G43502.1_47800144
hsa-miR-6715b-5p ctcTGCCTGacggca ACAGGCAC m6b Created HPRO6_36723_G43502.1_47800144
hsa-miR-6808-5p ctCTGCCTGacggca CAGGCAGG m7a (m6a->m7a) HPRO6_36723_G43502.1_47800144
hsa-miR-6893-5p ctCTGCCTGacggca CAGGCAGG m7a (m6a->m7a) HPRO6_36723_G43502.1_47800144
hsa-miR-7112-5p ctCTGCCCGacggca ACGGGCAG m7b (m7b->m6b) HPRO6_36723_G43502.1_47800144
hsa-miR-1910-3p cTCTGCCTgacggca GAGGCAGA m7b Created HPRO6_36723_G43502.1_47800144
hsa-miR-2682-5p ctCTGCCTGacggca CAGGCAGU m7a (m6a->m7a) HPRO6_36723_G43502.1_47800144
hsa-miR-4269 ctcTGCCTGacggca GCAGGCAC m6b Created HPRO6_36723_G43502.1_47800144
hsa-miR-4514 ctCTGCCTGacggca ACAGGCAG m7b (m6b->m7b) HPRO6_36723_G43502.1_47800144
hsa-miR-4692 ctCTGCCTGAcggca UCAGGCAG m8a Created HPRO6_36723_G43502.1_47800144
hsa-miR-6511a-5p cTCTGCCTGacggca CAGGCAGA m8a (m7a->m8a) HPRO6_36723_G43502.1_47800144
hsa-miR-6715b-5p ctcTGCCTGacggca ACAGGCAC m6b Created HPRO6_36723_G43502.1_47800144
hsa-miR-6808-5p ctCTGCCTGacggca CAGGCAGG m7a (m6a->m7a) HPRO6_36723_G43502.1_47800144
hsa-miR-6893-5p ctCTGCCTGacggca CAGGCAGG m7a (m6a->m7a) HPRO6_36723_G43502.1_47800144
hsa-miR-7112-5p ctCTGCCCGacggca ACGGGCAG m7b (m7b->m6b) HPRO6_36723_G43502.1_47800144
hsa-miR-1910-3p cTCTGCCTgacggca GAGGCAGA m7b Created HPRO6_36723_G43502.1_47800144
hsa-miR-2682-5p ctCTGCCTGacggca CAGGCAGU m7a (m6a->m7a) HPRO6_36723_G43502.1_47800144
hsa-miR-4269 ctcTGCCTGacggca GCAGGCAC m6b Created HPRO6_36723_G43502.1_47800144
hsa-miR-4514 ctCTGCCTGacggca ACAGGCAG m7b (m6b->m7b) HPRO6_36723_G43502.1_47800144
hsa-miR-4692 ctCTGCCTGAcggca UCAGGCAG m8a Created HPRO6_36723_G43502.1_47800144
hsa-miR-6511a-5p cTCTGCCTGacggca CAGGCAGA m8a (m7a->m8a) HPRO6_36723_G43502.1_47800144
hsa-miR-6715b-5p ctcTGCCTGacggca ACAGGCAC m6b Created HPRO6_36723_G43502.1_47800144
hsa-miR-6808-5p ctCTGCCTGacggca CAGGCAGG m7a (m6a->m7a) HPRO6_36723_G43502.1_47800144
hsa-miR-6893-5p ctCTGCCTGacggca CAGGCAGG m7a (m6a->m7a) HPRO6_36723_G43502.1_47800144
hsa-miR-7112-5p ctCTGCCCGacggca ACGGGCAG m7b (m7b->m6b) HPRO6_36723_G43502.1_47800144
hsa-miR-1910-3p cTCTGCCTgacggca GAGGCAGA m7b Created HPRO6_36723_G43502.1_47800144
hsa-miR-2682-5p ctCTGCCTGacggca CAGGCAGU m7a (m6a->m7a) HPRO6_36723_G43502.1_47800144
hsa-miR-4269 ctcTGCCTGacggca GCAGGCAC m6b Created HPRO6_36723_G43502.1_47800144
hsa-miR-4514 ctCTGCCTGacggca ACAGGCAG m7b (m6b->m7b) HPRO6_36723_G43502.1_47800144
hsa-miR-4692 ctCTGCCTGAcggca UCAGGCAG m8a Created HPRO6_36723_G43502.1_47800144
hsa-miR-6511a-5p cTCTGCCTGacggca CAGGCAGA m8a (m7a->m8a) HPRO6_36723_G43502.1_47800144
hsa-miR-6715b-5p ctcTGCCTGacggca ACAGGCAC m6b Created HPRO6_36723_G43502.1_47800144
hsa-miR-6808-5p ctCTGCCTGacggca CAGGCAGG m7a (m6a->m7a) HPRO6_36723_G43502.1_47800144
hsa-miR-6893-5p ctCTGCCTGacggca CAGGCAGG m7a (m6a->m7a) HPRO6_36723_G43502.1_47800144
hsa-miR-7112-5p ctCTGCCCGacggca ACGGGCAG m7b (m7b->m6b) HPRO6_36723_G43502.1_47800144

Mutation Mutation ID Sample Name Cancer Type
chr18:g.50273742C>T COSM4072445 TCGA-BR-8487-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-27a-5p ttgAAGCCCaccttg AGGGCUUA m6b Disrupted HHFKP_66611_cluster-11037_3_68
hsa-miR-27b-5p ttgAAGCTCaccttg AGAGCUUA m6b Created HHFKP_66611_cluster-11037_3_68
hsa-miR-4417 ttgaAGCCCACCttg GGUGGGCU m8a Disrupted HHFKP_66611_cluster-11037_3_68
hsa-miR-4792 ttgaaGCTCACCttg CGGUGAGC m7b Created HHFKP_66611_cluster-11037_3_68
hsa-miR-541-3p ttgaaGCCCACCttg UGGUGGGC m7b Disrupted HHFKP_66611_cluster-11037_3_68
hsa-miR-654-5p ttgaaGCCCACCttg UGGUGGGC m7b Disrupted HHFKP_66611_cluster-11037_3_68
hsa-miR-27a-5p ttgAAGCCCaccttg AGGGCUUA m6b Disrupted HHFKP_66611_cluster-11037_3_68
hsa-miR-27b-5p ttgAAGCTCaccttg AGAGCUUA m6b Created HHFKP_66611_cluster-11037_3_68
hsa-miR-4417 ttgaAGCCCACCttg GGUGGGCU m8a Disrupted HHFKP_66611_cluster-11037_3_68
hsa-miR-4792 ttgaaGCTCACCttg CGGUGAGC m7b Created HHFKP_66611_cluster-11037_3_68
hsa-miR-541-3p ttgaaGCCCACCttg UGGUGGGC m7b Disrupted HHFKP_66611_cluster-11037_3_68
hsa-miR-654-5p ttgaaGCCCACCttg UGGUGGGC m7b Disrupted HHFKP_66611_cluster-11037_3_68
hsa-miR-27a-5p ttgAAGCCCaccttg AGGGCUUA m6b Disrupted HHFKP_66611_cluster-11037_3_68
hsa-miR-27b-5p ttgAAGCTCaccttg AGAGCUUA m6b Created HHFKP_66611_cluster-11037_3_68
hsa-miR-4417 ttgaAGCCCACCttg GGUGGGCU m8a Disrupted HHFKP_66611_cluster-11037_3_68
hsa-miR-4792 ttgaaGCTCACCttg CGGUGAGC m7b Created HHFKP_66611_cluster-11037_3_68
hsa-miR-541-3p ttgaaGCCCACCttg UGGUGGGC m7b Disrupted HHFKP_66611_cluster-11037_3_68
hsa-miR-654-5p ttgaaGCCCACCttg UGGUGGGC m7b Disrupted HHFKP_66611_cluster-11037_3_68
hsa-miR-27a-5p ttgAAGCCCaccttg AGGGCUUA m6b Disrupted HHFKP_66611_cluster-11037_3_68
hsa-miR-27b-5p ttgAAGCTCaccttg AGAGCUUA m6b Created HHFKP_66611_cluster-11037_3_68
hsa-miR-4417 ttgaAGCCCACCttg GGUGGGCU m8a Disrupted HHFKP_66611_cluster-11037_3_68
hsa-miR-4792 ttgaaGCTCACCttg CGGUGAGC m7b Created HHFKP_66611_cluster-11037_3_68
hsa-miR-541-3p ttgaaGCCCACCttg UGGUGGGC m7b Disrupted HHFKP_66611_cluster-11037_3_68
hsa-miR-654-5p ttgaaGCCCACCttg UGGUGGGC m7b Disrupted HHFKP_66611_cluster-11037_3_68

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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