SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0022710
Gene Symbol: MAP4K2
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Browse Pathways

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr11:g.64800962G>C COSM2150577 TCGA-06-0188-01 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3918 gGGCCCTGggcatca ACAGGGCC m7b Disrupted HHFCT_25658_cluster-4383_5_8
hsa-miR-4685-5p ggGCCCTGGGcatca CCCAGGGC m8a Disrupted HHFCT_25658_cluster-4383_5_8
hsa-miR-6764-5p gggCCCTGGGcatca UCCCAGGG m7b Disrupted HHFCT_25658_cluster-4383_5_8
hsa-miR-6837-5p ggGCCCTGGgcatca ACCAGGGC m7b (m7b->m6b) HHFCT_25658_cluster-4383_5_8
hsa-miR-6840-3p gggcCCTGGGCatca GCCCAGGA m7a Disrupted HHFCT_25658_cluster-4383_5_8
hsa-miR-7160-3p GGGCCCTGggcatca CAGGGCCC m8a Disrupted HHFCT_25658_cluster-4383_5_8
hsa-miR-1915-3p gggCCCTGGGcatca CCCCAGGG m7b Disrupted HHFCT_25658_cluster-4383_5_8

Mutation Mutation ID Sample Name Cancer Type
chr11:g.64800938C>T COSM2164437 SW1463 [large_intestine][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1295b-5p agCTGGGTGagctgc CACCCAGA m7a (m6a->m7a) HHFCT_25658_cluster-4383_5_8
hsa-miR-500b-3p agCTGGGTGagctgc GCACCCAG m7b (m6b->m7b) HHFCT_25658_cluster-4383_5_8
hsa-miR-6784-3p agctGGGTGAGctgc UCUCACCC m7b Created HHFCT_25658_cluster-4383_5_8
hsa-miR-6862-3p agctGGGTGAGctgc CCUCACCC m7b Created HHFCT_25658_cluster-4383_5_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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