SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NR_125850
Gene Symbol: MAMDC2
Browse Associations

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr9:g.70188700A>G COSN15230269 SM-4AX84 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr9:g.70062060G>T COSN5244442 SS6003133 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-151a-3p agcagCAGTCTAccc CUAGACUG m7b Disrupted HHFCT_161061_cluster-22797_3_8
hsa-miR-3529-5p agcagcaGTCTACCc AGGUAGAC m7b Disrupted HHFCT_161061_cluster-22797_3_8
hsa-miR-379-5p agcagcaGTCTACCc UGGUAGAC m7b Disrupted HHFCT_161061_cluster-22797_3_8
hsa-miR-4463 agcagCAGTCTaccc GAGACUGG m6b Disrupted HHFCT_161061_cluster-22797_3_8
hsa-miR-4499 agcagCAGTCTaccc AAGACUGA m6b Disrupted HHFCT_161061_cluster-22797_3_8
hsa-miR-4650-3p agcagcaTTCTACCc AGGUAGAA m7b Created HHFCT_161061_cluster-22797_3_8

Mutation Mutation ID Sample Name Cancer Type
chr9:g.70044612G>T COSM288340 TCGA-AG-3878-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4736 tcgACCTGCCcgctg AGGCAGGU m7b Disrupted HHFCT_161059_cluster-22797_1_8
hsa-miR-4747-5p tcgaCCTTCCCgctg AGGGAAGG m7b Created HHFCT_161059_cluster-22797_1_8
hsa-miR-493-3p tcGACCTTCccgctg UGAAGGUC m7b (m6b->m7b) HHFCT_161059_cluster-22797_1_8
hsa-miR-5196-5p tcgaCCTTCCCgctg AGGGAAGG m7b Created HHFCT_161059_cluster-22797_1_8
hsa-miR-6721-5p tcgaCCTGCCCgctg UGGGCAGG m7b Disrupted HHFCT_161059_cluster-22797_1_8
hsa-miR-7112-5p tcgacCTGCCCGctg ACGGGCAG m7b Disrupted HHFCT_161059_cluster-22797_1_8

Mutation Mutation ID Sample Name Cancer Type
chr9:g.70044607G>A COSM1178732 SWE-8 [prostate][NS][adenoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3616-3p TGCCCTCGacctgcc CGAGGGCA m8a Disrupted HHFCT_161059_cluster-22797_1_8
hsa-miR-4721 tGCCCTCAacctgcc UGAGGGCU m7a Created HHFCT_161059_cluster-22797_1_8
hsa-miR-657 tgccctcAACCTGCc GGCAGGUU m7b Created HHFCT_161059_cluster-22797_1_8

Mutation Mutation ID Sample Name Cancer Type
chr9:g.70044046G>C COSN5122801 HCC50 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6716-3p caaAGTTCGGcagct UCCGAACU m7b Created HHFKP_148578_cluster-22797_1_404
hsa-miR-6716-3p caaAGTTCGGcagct UCCGAACU m7b Created HHFKP_148578_cluster-22797_1_404

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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