SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0053930
Gene Symbol: LTBP1
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Browse Pathways

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr2:g.33347511G>A COSM574829 TCGA-67-3773-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr2:g.33347497C>G COSM374339 LUAD-NYU408 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4497 gccgcTCCCGGAcct CUCCGGGA m7b Disrupted HHFCT_87799_cluster-12829_16_8
hsa-miR-6090 gcCGCTCCCggacct GGGGAGCG m7b (m7b->m6b) HHFCT_87799_cluster-12829_16_8
hsa-miR-6746-5p gccgCTCCCGGacct CCGGGAGA m7a Disrupted HHFCT_87799_cluster-12829_16_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.33347493G>A COSM4093964 TCGA-BR-4188-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6090 cagtgcCGCTCCCgg GGGGAGCG m7b Disrupted HHFCT_87799_cluster-12829_16_8
hsa-miR-891a-3p caGTGCCACTcccgg AGUGGCAC m8a Created HHFCT_87799_cluster-12829_16_8
hsa-miR-6090 cagtgcCGCTCCCgg GGGGAGCG m7b Disrupted HHFCT_87799_cluster-12829_16_8
hsa-miR-891a-3p caGTGCCACTcccgg AGUGGCAC m8a Created HHFCT_87799_cluster-12829_16_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.33347481C>T COSM574831 TCGA-44-6778-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2681-3p cCCATGATtgggcag UAUCAUGG m7b Created HHFCT_87799_cluster-12829_16_8
hsa-miR-2681-3p cCCATGATtgggcag UAUCAUGG m7b Created HHFCT_87799_cluster-12829_16_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.33309534A>C COSM3713835 41T [skin][sun_exposed_site][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3160-3p tTCAGCTCgatgaca AGAGCUGA m7b Created HHFCT_87796_cluster-12829_13_6
hsa-miR-3160-3p tTCAGCTCgatgaca AGAGCUGA m7b Created HHFCT_87796_cluster-12829_13_6

Mutation Mutation ID Sample Name Cancer Type
chr2:g.33309522TGG>TAA COSM4566355 CSCC-62-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7151-5p gtccgGATGGATttcag GAUCCAUC m7b Disrupted HHFCT_87795_cluster-12829_12_6
hsa-miR-7151-5p gtccgGATGGATttcag GAUCCAUC m7b Disrupted HHFCT_87795_cluster-12829_12_6

Mutation Mutation ID Sample Name Cancer Type
chr2:g.33301577T>A COSM1531685 TCGA-55-6969-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2276-5p ggaacaCAGAGGGCt GCCCUCUG m8a Created HHFKP_81077_cluster-12829_21_13
hsa-miR-4255 gGAACACTGagggct CAGUGUUC m8a (m8a->m7a) HHFKP_81077_cluster-12829_21_13
hsa-miR-4302 ggaACACTGagggct CCAGUGUG m6b Disrupted HHFKP_81077_cluster-12829_21_13

Mutation Mutation ID Sample Name Cancer Type
chr2:g.33301558A>G COSM1020518 TCGA-BS-A0UF-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4641 tgtgctCATGGGCAg UGCCCAUG m8a Disrupted HHFKP_81077_cluster-12829_21_13
hsa-miR-4641 tgtgctCATGGGCAg UGCCCAUG m8a Disrupted HHFKP_81077_cluster-12829_21_13

Mutation Mutation ID Sample Name Cancer Type
chr2:g.33300507G>A COSM4699455 T3479 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-129-1-3p aaataccAAGGGCTc AAGCCCUU m7b Created HHKTA_34786_NM_206943|3287|3326|2.16339705258786|0.444076136370688
hsa-miR-129-2-3p aaataccAAGGGCTc AAGCCCUU m7b Created HHKTA_34786_NM_206943|3287|3326|2.16339705258786|0.444076136370688
hsa-miR-4687-5p aaataccGAGGGCTc CAGCCCUC m7b Disrupted HHKTA_34786_NM_206943|3287|3326|2.16339705258786|0.444076136370688
hsa-miR-4798-5p aaATACCGAgggctc UUCGGUAU m7b (m7b->m6b) HHKTA_34786_NM_206943|3287|3326|2.16339705258786|0.444076136370688
hsa-miR-8088 aaaTACCGAGGgctc CCUCGGUA m8a Disrupted HHKTA_34786_NM_206943|3287|3326|2.16339705258786|0.444076136370688
hsa-miR-129-1-3p aaataccAAGGGCTc AAGCCCUU m7b Created HHKTA_34786_NM_206943|3287|3326|2.16339705258786|0.444076136370688
hsa-miR-129-2-3p aaataccAAGGGCTc AAGCCCUU m7b Created HHKTA_34786_NM_206943|3287|3326|2.16339705258786|0.444076136370688
hsa-miR-4687-5p aaataccGAGGGCTc CAGCCCUC m7b Disrupted HHKTA_34786_NM_206943|3287|3326|2.16339705258786|0.444076136370688
hsa-miR-4798-5p aaATACCGAgggctc UUCGGUAU m7b (m7b->m6b) HHKTA_34786_NM_206943|3287|3326|2.16339705258786|0.444076136370688
hsa-miR-8088 aaaTACCGAGGgctc CCUCGGUA m8a Disrupted HHKTA_34786_NM_206943|3287|3326|2.16339705258786|0.444076136370688

Mutation Mutation ID Sample Name Cancer Type
chr2:g.33300504A>T COSM1631990 RK019_C [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4798-5p caaaaATACCGAggg UUCGGUAU m7b Disrupted HHKTA_34786_NM_206943|3287|3326|2.16339705258786|0.444076136370688
hsa-miR-8088 caaaaaTACCGAGGg CCUCGGUA m8a Disrupted HHKTA_34786_NM_206943|3287|3326|2.16339705258786|0.444076136370688
hsa-miR-4798-5p caaaaATACCGAggg UUCGGUAU m7b Disrupted HHKTA_34786_NM_206943|3287|3326|2.16339705258786|0.444076136370688
hsa-miR-8088 caaaaaTACCGAGGg CCUCGGUA m8a Disrupted HHKTA_34786_NM_206943|3287|3326|2.16339705258786|0.444076136370688

Mutation Mutation ID Sample Name Cancer Type
chr2:g.33300493A>G COSM3972230 TCGA-HT-A5RA-01 [central_nervous_system][brain][glioma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4325 aacgggcAGTGCAAa UUGCACUU m7a Disrupted HHKTA_34786_NM_206943|3287|3326|2.16339705258786|0.444076136370688
hsa-miR-500a-3p aacgggcGGTGCAaa AUGCACCU m6b Created HHKTA_34786_NM_206943|3287|3326|2.16339705258786|0.444076136370688
hsa-miR-6890-3p aacgGGCAGTGcaaa CCACUGCC m7b Disrupted HHKTA_34786_NM_206943|3287|3326|2.16339705258786|0.444076136370688
hsa-miR-7703 aacgggcAGTGCAAa UUGCACUC m7a Disrupted HHKTA_34786_NM_206943|3287|3326|2.16339705258786|0.444076136370688
hsa-miR-4325 aacgggcAGTGCAAa UUGCACUU m7a Disrupted HHKTA_34786_NM_206943|3287|3326|2.16339705258786|0.444076136370688
hsa-miR-500a-3p aacgggcGGTGCAaa AUGCACCU m6b Created HHKTA_34786_NM_206943|3287|3326|2.16339705258786|0.444076136370688
hsa-miR-6890-3p aacgGGCAGTGcaaa CCACUGCC m7b Disrupted HHKTA_34786_NM_206943|3287|3326|2.16339705258786|0.444076136370688
hsa-miR-7703 aacgggcAGTGCAAa UUGCACUC m7a Disrupted HHKTA_34786_NM_206943|3287|3326|2.16339705258786|0.444076136370688

Mutation Mutation ID Sample Name Cancer Type
chr2:g.33300489G>A COSM1407877 TCGA-A6-5661-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6514-3p tgtaaACAGGCAGtg CUGCCUGU m8a Created HHKTA_34786_NM_206943|3287|3326|2.16339705258786|0.444076136370688
hsa-miR-6811-3p tgtaaACAGGCagtg AGCCUGUG m6b Created HHKTA_34786_NM_206943|3287|3326|2.16339705258786|0.444076136370688
Mutation Mutation ID Sample Name Cancer Type
chr2:g.33300488CG>C COSM391877 LUAD-NYU1219 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation Mutation ID Sample Name Cancer Type
chr2:g.33300488C>T COSM4699453 T3062 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr2:g.33293267C>T COSM477355 TCGA-BP-5195-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6723-5p tcCGGACTAcaagca AUAGUCCG m7b (m6b->m7b) HHFKP_81076_cluster-12829_20_393

Mutation Mutation ID Sample Name Cancer Type
chr2:g.33293263G>A COSM2943004 TCGA-GN-A26C-01 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1203 ggaCTCCGGaccaca CCCGGAGC m6b Disrupted HHFKP_81076_cluster-12829_20_393
hsa-miR-1289 GGACTCCAgaccaca UGGAGUCC m8a Created HHFKP_81076_cluster-12829_20_393
hsa-miR-3198 gGACTCCAgaccaca GUGGAGUC m7b Created HHFKP_81076_cluster-12829_20_393
hsa-miR-4309 gGACTCCAGaccaca CUGGAGUC m8a (m7a->m8a) HHFKP_81076_cluster-12829_20_393
hsa-miR-516b-5p ggaCTCCAGAccaca AUCUGGAG m7b Created HHFKP_81076_cluster-12829_20_393
hsa-miR-6503-5p ggactcCAGACCaca AGGUCUGC m6b Created HHFKP_81076_cluster-12829_20_393
hsa-miR-6848-3p ggactccAGACCACa GUGGUCUC m7a Created HHFKP_81076_cluster-12829_20_393
hsa-miR-1203 ggaCTCCGGaccaca CCCGGAGC m6b Disrupted HHFKP_81076_cluster-12829_20_393
hsa-miR-1289 GGACTCCAgaccaca UGGAGUCC m8a Created HHFKP_81076_cluster-12829_20_393
hsa-miR-3198 gGACTCCAgaccaca GUGGAGUC m7b Created HHFKP_81076_cluster-12829_20_393
hsa-miR-4309 gGACTCCAGaccaca CUGGAGUC m8a (m7a->m8a) HHFKP_81076_cluster-12829_20_393
hsa-miR-516b-5p ggaCTCCAGAccaca AUCUGGAG m7b Created HHFKP_81076_cluster-12829_20_393
hsa-miR-6503-5p ggactcCAGACCaca AGGUCUGC m6b Created HHFKP_81076_cluster-12829_20_393
hsa-miR-6848-3p ggactccAGACCACa GUGGUCUC m7a Created HHFKP_81076_cluster-12829_20_393

Mutation Mutation ID Sample Name Cancer Type
chr2:g.33280125G>A COSM3910266 TCGA-FW-A3R5-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1237-3p ctgcaCAGAAGGAtt UCCUUCUG m8a Disrupted HHFKP_81075_cluster-12829_19_36
hsa-miR-1248 ctgcacAGAAGGatt ACCUUCUU m6b Disrupted HHFKP_81075_cluster-12829_19_36
hsa-miR-2113 ctGCACAAAaggatt AUUUGUGC m7b (m6b->m7b) HHFKP_81075_cluster-12829_19_36
hsa-miR-3182 ctgcACAGAAGgatt GCUUCUGU m7b Disrupted HHFKP_81075_cluster-12829_19_36
hsa-miR-5008-3p ctGCACAGaaggatt CCUGUGCU m6b Disrupted HHFKP_81075_cluster-12829_19_36
hsa-miR-501-5p ctgcacaAAAGGATt AAUCCUUU m7b Created HHFKP_81075_cluster-12829_19_36
hsa-miR-6737-3p ctGCACAGAaggatt UCUGUGCU m7a (m7a->m6a) HHFKP_81075_cluster-12829_19_36
hsa-miR-6868-3p ctgcacAGAAGGAtt UUCCUUCU m7b Disrupted HHFKP_81075_cluster-12829_19_36
hsa-miR-6889-3p ctGCACAGAaggatt UCUGUGCC m7a (m7a->m6a) HHFKP_81075_cluster-12829_19_36
hsa-miR-7157-3p ctGCACAGAaggatt UCUGUGCU m7a (m7a->m6a) HHFKP_81075_cluster-12829_19_36
hsa-miR-1237-3p ctgcaCAGAAGGAtt UCCUUCUG m8a Disrupted HHFKP_81075_cluster-12829_19_36
hsa-miR-1248 ctgcacAGAAGGatt ACCUUCUU m6b Disrupted HHFKP_81075_cluster-12829_19_36
hsa-miR-2113 ctGCACAAAaggatt AUUUGUGC m7b (m6b->m7b) HHFKP_81075_cluster-12829_19_36
hsa-miR-3182 ctgcACAGAAGgatt GCUUCUGU m7b Disrupted HHFKP_81075_cluster-12829_19_36
hsa-miR-5008-3p ctGCACAGaaggatt CCUGUGCU m6b Disrupted HHFKP_81075_cluster-12829_19_36
hsa-miR-501-5p ctgcacaAAAGGATt AAUCCUUU m7b Created HHFKP_81075_cluster-12829_19_36
hsa-miR-6737-3p ctGCACAGAaggatt UCUGUGCU m7a (m7a->m6a) HHFKP_81075_cluster-12829_19_36
hsa-miR-6868-3p ctgcacAGAAGGAtt UUCCUUCU m7b Disrupted HHFKP_81075_cluster-12829_19_36
hsa-miR-6889-3p ctGCACAGAaggatt UCUGUGCC m7a (m7a->m6a) HHFKP_81075_cluster-12829_19_36
hsa-miR-7157-3p ctGCACAGAaggatt UCUGUGCU m7a (m7a->m6a) HHFKP_81075_cluster-12829_19_36

Mutation Mutation ID Sample Name Cancer Type
chr2:g.33280117C>T COSM3581285 TCGA-DA-A1I4-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1292-5p tgCGTTCCCtgcaca UGGGAACG m7b (m7b->m6b) HHFKP_81075_cluster-12829_19_36
hsa-miR-1909-3p tgcgttCCCTGCaca CGCAGGGG m6b Disrupted HHFKP_81075_cluster-12829_19_36
hsa-miR-211-3p tgcgtTCCCTGCaca GCAGGGAC m7a Disrupted HHFKP_81075_cluster-12829_19_36
hsa-miR-2467-3p tgcgttCTCTGCaca AGCAGAGG m6b Created HHFKP_81075_cluster-12829_19_36
hsa-miR-3678-3p tgcgttCTCTGCAca CUGCAGAG m7b Created HHFKP_81075_cluster-12829_19_36
hsa-miR-3919 tgcgTTCTCTGCaca GCAGAGAA m8a Created HHFKP_81075_cluster-12829_19_36
hsa-miR-3925-5p tgcGTTCTCTgcaca AAGAGAAC m7b Created HHFKP_81075_cluster-12829_19_36
hsa-miR-6132 tgcgttCCCTGCaca AGCAGGGC m6b Disrupted HHFKP_81075_cluster-12829_19_36
hsa-miR-6750-5p tgcGTTCCCTGcaca CAGGGAAC m8a Disrupted HHFKP_81075_cluster-12829_19_36
hsa-miR-6822-5p tgcGTTCCCTGcaca CAGGGAAC m8a Disrupted HHFKP_81075_cluster-12829_19_36
hsa-miR-6836-5p tgcgttCCCTGCaca CGCAGGGC m6b Disrupted HHFKP_81075_cluster-12829_19_36
hsa-miR-1292-5p tgCGTTCCCtgcaca UGGGAACG m7b (m7b->m6b) HHFKP_81075_cluster-12829_19_36
hsa-miR-1909-3p tgcgttCCCTGCaca CGCAGGGG m6b Disrupted HHFKP_81075_cluster-12829_19_36
hsa-miR-211-3p tgcgtTCCCTGCaca GCAGGGAC m7a Disrupted HHFKP_81075_cluster-12829_19_36
hsa-miR-2467-3p tgcgttCTCTGCaca AGCAGAGG m6b Created HHFKP_81075_cluster-12829_19_36
hsa-miR-3678-3p tgcgttCTCTGCAca CUGCAGAG m7b Created HHFKP_81075_cluster-12829_19_36
hsa-miR-3919 tgcgTTCTCTGCaca GCAGAGAA m8a Created HHFKP_81075_cluster-12829_19_36
hsa-miR-3925-5p tgcGTTCTCTgcaca AAGAGAAC m7b Created HHFKP_81075_cluster-12829_19_36
hsa-miR-6132 tgcgttCCCTGCaca AGCAGGGC m6b Disrupted HHFKP_81075_cluster-12829_19_36
hsa-miR-6750-5p tgcGTTCCCTGcaca CAGGGAAC m8a Disrupted HHFKP_81075_cluster-12829_19_36
hsa-miR-6822-5p tgcGTTCCCTGcaca CAGGGAAC m8a Disrupted HHFKP_81075_cluster-12829_19_36
hsa-miR-6836-5p tgcgttCCCTGCaca CGCAGGGC m6b Disrupted HHFKP_81075_cluster-12829_19_36

Mutation Mutation ID Sample Name Cancer Type
chr2:g.33280113G>A COSM4442886 SJBALL020824_D1 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][acute_lymphoblastic_B_cell_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1292-5p ccagtgCGTTCCCtg UGGGAACG m7b Disrupted HHFKP_81075_cluster-12829_19_36
hsa-miR-521 ccAGTGCGTTccctg AACGCACU m8a Disrupted HHFKP_81075_cluster-12829_19_36
hsa-miR-6716-5p ccagtgCATTCCCtg UGGGAAUG m7b Created HHFKP_81075_cluster-12829_19_36
hsa-miR-6750-5p ccagtgcGTTCCCTg CAGGGAAC m7b Disrupted HHFKP_81075_cluster-12829_19_36
hsa-miR-6822-5p ccagtgcGTTCCCTg CAGGGAAC m7b Disrupted HHFKP_81075_cluster-12829_19_36
hsa-miR-1292-5p ccagtgCGTTCCCtg UGGGAACG m7b Disrupted HHFKP_81075_cluster-12829_19_36
hsa-miR-521 ccAGTGCGTTccctg AACGCACU m8a Disrupted HHFKP_81075_cluster-12829_19_36
hsa-miR-6716-5p ccagtgCATTCCCtg UGGGAAUG m7b Created HHFKP_81075_cluster-12829_19_36
hsa-miR-6750-5p ccagtgcGTTCCCTg CAGGGAAC m7b Disrupted HHFKP_81075_cluster-12829_19_36
hsa-miR-6822-5p ccagtgcGTTCCCTg CAGGGAAC m7b Disrupted HHFKP_81075_cluster-12829_19_36

Mutation Mutation ID Sample Name Cancer Type
chr2:g.33280107C>T COSM574834 TCGA-38-4632-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-106b-3p atcttacCAGTGCGt CCGCACUG m7b Disrupted HHFKP_81075_cluster-12829_19_36
hsa-miR-3923 atctTACTAGTgcgt AACUAGUA m7b Created HHFKP_81075_cluster-12829_19_36
hsa-miR-4490 atcTTACCAGtgcgt UCUGGUAA m7b Disrupted HHFKP_81075_cluster-12829_19_36
hsa-miR-628-3p atcTTACTAGtgcgt UCUAGUAA m7b Created HHFKP_81075_cluster-12829_19_36
hsa-miR-106b-3p atcttacCAGTGCGt CCGCACUG m7b Disrupted HHFKP_81075_cluster-12829_19_36
hsa-miR-3923 atctTACTAGTgcgt AACUAGUA m7b Created HHFKP_81075_cluster-12829_19_36
hsa-miR-4490 atcTTACCAGtgcgt UCUGGUAA m7b Disrupted HHFKP_81075_cluster-12829_19_36
hsa-miR-628-3p atcTTACTAGtgcgt UCUAGUAA m7b Created HHFKP_81075_cluster-12829_19_36

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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