SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
||||||||
Home | Search | Help | Download |
Transcript ID: | hsa_circ_0053927 |
---|---|
Gene Symbol: | LTBP1 |
Browse Associations | |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr2:g.33275062G>A | COSM3581277 | TCGA-DA-A1I5-06 | [skin][NS][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-193a-3p | gatttatGGCCAGTg | AACUGGCC | m7b | Disrupted | HHFCT_87794_cluster-12829_11_14 |
hsa-miR-193b-3p | gatttatGGCCAGTg | AACUGGCC | m7b | Disrupted | HHFCT_87794_cluster-12829_11_14 |
hsa-miR-3187-3p | gatttATGGCCAgtg | UUGGCCAU | m7b | Disrupted | HHFCT_87794_cluster-12829_11_14 |
hsa-miR-3190-5p | gatttaTGGCCAGtg | UCUGGCCA | m7b | Disrupted | HHFCT_87794_cluster-12829_11_14 |
hsa-miR-4529-5p | gatttATGGCCagtg | AGGCCAUC | m6b | Disrupted | HHFCT_87794_cluster-12829_11_14 |
hsa-miR-4794 | gatttaTAGCCAGtg | UCUGGCUA | m7b | Created | HHFCT_87794_cluster-12829_11_14 |
hsa-miR-664a-5p | gatttaTAGCCAGTg | ACUGGCUA | m8a | Created | HHFCT_87794_cluster-12829_11_14 |
hsa-miR-892b | gatttatAGCCAGTg | CACUGGCU | m7b | Created | HHFCT_87794_cluster-12829_11_14 |
hsa-miR-193a-3p | gatttatGGCCAGTg | AACUGGCC | m7b | Disrupted | HHFCT_87794_cluster-12829_11_14 |
hsa-miR-193b-3p | gatttatGGCCAGTg | AACUGGCC | m7b | Disrupted | HHFCT_87794_cluster-12829_11_14 |
hsa-miR-3187-3p | gatttATGGCCAgtg | UUGGCCAU | m7b | Disrupted | HHFCT_87794_cluster-12829_11_14 |
hsa-miR-3190-5p | gatttaTGGCCAGtg | UCUGGCCA | m7b | Disrupted | HHFCT_87794_cluster-12829_11_14 |
hsa-miR-4529-5p | gatttATGGCCagtg | AGGCCAUC | m6b | Disrupted | HHFCT_87794_cluster-12829_11_14 |
hsa-miR-4794 | gatttaTAGCCAGtg | UCUGGCUA | m7b | Created | HHFCT_87794_cluster-12829_11_14 |
hsa-miR-664a-5p | gatttaTAGCCAGTg | ACUGGCUA | m8a | Created | HHFCT_87794_cluster-12829_11_14 |
hsa-miR-892b | gatttatAGCCAGTg | CACUGGCU | m7b | Created | HHFCT_87794_cluster-12829_11_14 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr2:g.33275047C>T | COSM118231 | TCGA-61-2109-01 | [ovary][NS][carcinoma][serous_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1285-3p | gcattTGCCCAGcag | UCUGGGCA | m7b | Disrupted | HHFCT_87794_cluster-12829_11_14 |
hsa-miR-3135b | gcatttgTCCAGCag | GGCUGGAG | m6b | Created | HHFCT_87794_cluster-12829_11_14 |
hsa-miR-3187-5p | gcattTGCCCAGcag | CCUGGGCA | m7b | Disrupted | HHFCT_87794_cluster-12829_11_14 |
hsa-miR-4486 | gcatttGCCCAGCag | GCUGGGCG | m7a | Disrupted | HHFCT_87794_cluster-12829_11_14 |
hsa-miR-4638-3p | gcattTGTCCAGcag | CCUGGACA | m7b | Created | HHFCT_87794_cluster-12829_11_14 |
hsa-miR-5189-5p | gcattTGCCCAGcag | UCUGGGCA | m7b | Disrupted | HHFCT_87794_cluster-12829_11_14 |
hsa-miR-5589-5p | gcatttgCCCAGCag | GGCUGGGU | m6b | Disrupted | HHFCT_87794_cluster-12829_11_14 |
hsa-miR-612 | gcattTGCCCAGCag | GCUGGGCA | m8a | Disrupted | HHFCT_87794_cluster-12829_11_14 |
hsa-miR-6860 | gcattTGCCCAGcag | ACUGGGCA | m7b | Disrupted | HHFCT_87794_cluster-12829_11_14 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr2:g.33275042A>C | COSM1020512 | TCGA-DI-A0WH-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-105-5p | cttgtGCATTTGccc | UCAAAUGC | m7b | Disrupted | HHFCT_87794_cluster-12829_11_14 |
hsa-miR-124-3p | cttGTGCCTTtgccc | UAAGGCAC | m7b | Created | HHFCT_87794_cluster-12829_11_14 |
hsa-miR-506-3p | cttGTGCCTTtgccc | UAAGGCAC | m7b | Created | HHFCT_87794_cluster-12829_11_14 |
hsa-miR-548an | cttgTGCCTTTgccc | AAAAGGCA | m7b | Created | HHFCT_87794_cluster-12829_11_14 |
hsa-miR-5582-5p | ctTGTGCCTttgccc | UAGGCACA | m7b | (m6b->m7b) | HHFCT_87794_cluster-12829_11_14 |
hsa-miR-7853-5p | cttgtGCATTTGccc | UCAAAUGC | m7b | Disrupted | HHFCT_87794_cluster-12829_11_14 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr2:g.33275039T>C | COSM4775883 | SJHYPO052 | [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][acute_lymphoblastic_leukaemia] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-let-7i-3p | tttcTTGCGCAtttg | CUGCGCAA | m7b | Created | HHFCT_87794_cluster-12829_11_14 |
hsa-let-7i-3p | tttcTTGCGCAtttg | CUGCGCAA | m7b | Created | HHFCT_87794_cluster-12829_11_14 |