SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0053914
Gene Symbol: LTBP1
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Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.33252733G>T COSM359423 LUAD-CHTN-MAD06-00668 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3180-5p cagtTCTGGAAGaca CUUCCAGA m8a Disrupted HHFKP_81071_cluster-12829_15_10
hsa-miR-4511 cAGTTCTTgaagaca GAAGAACU m7b Created HHFKP_81071_cluster-12829_15_10
hsa-miR-520a-5p cagtTCTGGAagaca CUCCAGAG m6b Disrupted HHFKP_81071_cluster-12829_15_10
hsa-miR-548b-3p caGTTCTTGaagaca CAAGAACC m7a (m6a->m7a) HHFKP_81071_cluster-12829_15_10
hsa-miR-525-5p cagtTCTGGAagaca CUCCAGAG m6b Disrupted HHFKP_81071_cluster-12829_15_10

Mutation Mutation ID Sample Name Cancer Type
chr2:g.33252730T>G COSM1582528 990300 [stomach][NS][carcinoma][intestinal_adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3180-5p tgtcagtTCTGGAAg CUUCCAGA m7b Disrupted HHFKP_81071_cluster-12829_15_10
hsa-miR-338-3p tgtcagTGCTGGAag UCCAGCAU m7a Created HHFKP_81071_cluster-12829_15_10
hsa-miR-383-3p tgtcAGTGCTGgaag ACAGCACU m7b Created HHFKP_81071_cluster-12829_15_10
hsa-miR-4530 tgtcagTGCTGGaag CCCAGCAG m6b Created HHFKP_81071_cluster-12829_15_10
hsa-miR-520a-5p tgtcagtTCTGGAag CUCCAGAG m6b Disrupted HHFKP_81071_cluster-12829_15_10
hsa-miR-525-5p tgtcagtTCTGGAag CUCCAGAG m6b Disrupted HHFKP_81071_cluster-12829_15_10
hsa-miR-4530 tgtcagTGCTGGaag CCCAGCAG m6b Created HHFKP_81071_cluster-12829_15_10
hsa-miR-383-3p tgtcAGTGCTGgaag ACAGCACU m7b Created HHFKP_81071_cluster-12829_15_10
hsa-miR-338-3p tgtcagTGCTGGAag UCCAGCAU m7a Created HHFKP_81071_cluster-12829_15_10
hsa-miR-3180-5p tgtcagtTCTGGAAg CUUCCAGA m7b Disrupted HHFKP_81071_cluster-12829_15_10
hsa-miR-520a-5p tgtcagtTCTGGAag CUCCAGAG m6b Disrupted HHFKP_81071_cluster-12829_15_10
hsa-miR-525-5p tgtcagtTCTGGAag CUCCAGAG m6b Disrupted HHFKP_81071_cluster-12829_15_10

Mutation Mutation ID Sample Name Cancer Type
chr2:g.33252717C>T COSM3581262 TCGA-DA-A1IC-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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