| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
||||||||
| Home | Search | Help | Download | |||||
| Transcript ID: | NM_001013253 |
|---|---|
| Gene Symbol: | LSP1 |
| Browse Associations | |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr11:g.1880149A>G | COSM321507 | 585260 | [lung][NS][carcinoma][small_cell_carcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-4713-5p | cagcaTGGGAGAgac | UUCUCCCA | m7b | Created | HPSEF_3622_G4342.1_1901380 |
| hsa-miR-532-3p | cagcaTGGGAGagac | CCUCCCAC | m6b | Created | HPSEF_3622_G4342.1_1901380 |
| hsa-miR-6845-3p | cagcatgGGAGAGac | CCUCUCCU | m6b | Created | HPSEF_3622_G4342.1_1901380 |
| hsa-miR-6867-3p | cagcatGGGAGAGac | CUCUCCCU | m7a | Created | HPSEF_3622_G4342.1_1901380 |
| hsa-miR-6872-3p | caGCATGGGagagac | CCCAUGCC | m7a | (m6a->m7a) | HPSEF_3622_G4342.1_1901380 |
| hsa-miR-6873-3p | cagcatgAGAGAGAc | UUCUCUCU | m7b | Disrupted | HPSEF_3622_G4342.1_1901380 |
| hsa-miR-7110-3p | cagcatGAGAGAGAc | UCUCUCUC | m8a | Disrupted | HPSEF_3622_G4342.1_1901380 |
| hsa-miR-2116-3p | cagcATGGGAGagac | CCUCCCAU | m7b | Created | HPSEF_3622_G4342.1_1901380 |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr11:g.1880148G>T | COSM321506 | 585260 | [lung][NS][carcinoma][small_cell_carcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-155-5p | ccAGCATTAgagaga | UUAAUGCU | m7b | (m6b->m7b) | HPSEF_3622_G4342.1_1901380 |
| hsa-miR-4684-5p | ccagcatTAGAGAGa | CUCUCUAC | m7a | Created | HPSEF_3622_G4342.1_1901380 |
| hsa-miR-4728-3p | cCAGCATGagagaga | CAUGCUGA | m7a | Disrupted | HPSEF_3622_G4342.1_1901380 |
| hsa-miR-520f-5p | ccagcaTTAGAGaga | CCUCUAAA | m6b | Created | HPSEF_3622_G4342.1_1901380 |
| hsa-miR-7110-3p | ccagcatGAGAGAGa | UCUCUCUC | m7b | Disrupted | HPSEF_3622_G4342.1_1901380 |