SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001129890
Gene Symbol: LRRC69
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr8:g.91200737G>A COSM1155033 TCGA-D1-A0ZQ-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-452-5p atatgtgAACAGTac AACUGUUU m6b Created HHHNA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-4676-3p atatgtgAACAGTac CACUGUUU m6b Created HHHNA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-892c-3p atatgtgAACAGTac CACUGUUU m6b Created HHHNA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-23a-3p atATGTGAacagtac AUCACAUU m6b Created HHHSA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-23b-3p atATGTGAacagtac AUCACAUU m6b Created HHHSA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-23c atATGTGAacagtac AUCACAUU m6b Created HHHSA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-452-5p atatgtgAACAGTac AACUGUUU m6b Created HHHSA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-4676-3p atatgtgAACAGTac CACUGUUU m6b Created HHHSA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-892c-3p atatgtgAACAGTac CACUGUUU m6b Created HHHSA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-23a-3p atATGTGAacagtac AUCACAUU m6b Created HHHNA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-23b-3p atATGTGAacagtac AUCACAUU m6b Created HHHNA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-23c atATGTGAacagtac AUCACAUU m6b Created HHHNA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-452-5p atatgtgAACAGTac AACUGUUU m6b Created HHHNA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-4676-3p atatgtgAACAGTac CACUGUUU m6b Created HHHNA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-892c-3p atatgtgAACAGTac CACUGUUU m6b Created HHHNA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-23a-3p atATGTGAacagtac AUCACAUU m6b Created HHHSA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-23b-3p atATGTGAacagtac AUCACAUU m6b Created HHHSA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-23c atATGTGAacagtac AUCACAUU m6b Created HHHSA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-452-5p atatgtgAACAGTac AACUGUUU m6b Created HHHSA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-4676-3p atatgtgAACAGTac CACUGUUU m6b Created HHHSA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-892c-3p atatgtgAACAGTac CACUGUUU m6b Created HHHSA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-23a-3p atATGTGAacagtac AUCACAUU m6b Created HHHNA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-23b-3p atATGTGAacagtac AUCACAUU m6b Created HHHNA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-23c atATGTGAacagtac AUCACAUU m6b Created HHHNA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-452-5p atatgtgAACAGTac AACUGUUU m6b Created HHHNA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-4676-3p atatgtgAACAGTac CACUGUUU m6b Created HHHNA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-892c-3p atatgtgAACAGTac CACUGUUU m6b Created HHHNA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-23a-3p atATGTGAacagtac AUCACAUU m6b Created HHHSA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-23b-3p atATGTGAacagtac AUCACAUU m6b Created HHHSA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-23c atATGTGAacagtac AUCACAUU m6b Created HHHSA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-452-5p atatgtgAACAGTac AACUGUUU m6b Created HHHSA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-4676-3p atatgtgAACAGTac CACUGUUU m6b Created HHHSA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-892c-3p atatgtgAACAGTac CACUGUUU m6b Created HHHSA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489

Mutation Mutation ID Sample Name Cancer Type
chr8:g.91200716GA>G COSM198369 TCGA-AA-3947-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-125a-5p tCTCAGGGAaaaacat UCCCUGAG m8a (m8a->m7a) HHHNA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-125b-5p tCTCAGGGAaaaacat UCCCUGAG m8a (m8a->m7a) HHHNA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-4319 tCTCAGGGAaaaacat UCCCUGAG m8a (m8a->m7a) HHHNA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-4446-5p tctcAGGGAAAaacat AUUUCCCU m7b Disrupted HHHNA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-4755-5p tctcAGGGAAAaacat UUUCCCUU m7a Disrupted HHHNA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-5006-3p tctcAGGGAAAaacat UUUCCCUU m7a Disrupted HHHNA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-670-5p tcTCAGGGAaaaacat GUCCCUGA m7b (m7b->m6b) HHHNA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-125a-5p tCTCAGGGAaaaacat UCCCUGAG m8a (m8a->m7a) HHHNA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-125b-5p tCTCAGGGAaaaacat UCCCUGAG m8a (m8a->m7a) HHHNA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-4319 tCTCAGGGAaaaacat UCCCUGAG m8a (m8a->m7a) HHHNA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-4446-5p tctcAGGGAAAaacat AUUUCCCU m7b Disrupted HHHNA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-4755-5p tctcAGGGAAAaacat UUUCCCUU m7a Disrupted HHHNA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-5006-3p tctcAGGGAAAaacat UUUCCCUU m7a Disrupted HHHNA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-670-5p tcTCAGGGAaaaacat GUCCCUGA m7b (m7b->m6b) HHHNA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-125a-5p tCTCAGGGAaaaacat UCCCUGAG m8a (m8a->m7a) HHHSA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-125b-5p tCTCAGGGAaaaacat UCCCUGAG m8a (m8a->m7a) HHHSA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-4319 tCTCAGGGAaaaacat UCCCUGAG m8a (m8a->m7a) HHHSA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-4446-5p tctcAGGGAAAaacat AUUUCCCU m7b Disrupted HHHSA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-4755-5p tctcAGGGAAAaacat UUUCCCUU m7a Disrupted HHHSA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-5006-3p tctcAGGGAAAaacat UUUCCCUU m7a Disrupted HHHSA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-670-5p tcTCAGGGAaaaacat GUCCCUGA m7b (m7b->m6b) HHHSA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-125a-5p tCTCAGGGAaaaacat UCCCUGAG m8a (m8a->m7a) HHHSA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-125b-5p tCTCAGGGAaaaacat UCCCUGAG m8a (m8a->m7a) HHHSA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-4319 tCTCAGGGAaaaacat UCCCUGAG m8a (m8a->m7a) HHHSA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-4446-5p tctcAGGGAAAaacat AUUUCCCU m7b Disrupted HHHSA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-4755-5p tctcAGGGAAAaacat UUUCCCUU m7a Disrupted HHHSA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-5006-3p tctcAGGGAAAaacat UUUCCCUU m7a Disrupted HHHSA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-670-5p tcTCAGGGAaaaacat GUCCCUGA m7b (m7b->m6b) HHHSA_21569_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489

Mutation Mutation ID Sample Name Cancer Type
chr8:g.91200710C>T COSM4510923 CSCC-37-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-125a-5p atgatctCTCAGGGa UCCCUGAG m7b Disrupted HHHNA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-125b-5p atgatctCTCAGGGa UCCCUGAG m7b Disrupted HHHNA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-345-3p atgatctTTCAGGGa GCCCUGAA m7b Created HHHNA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-4319 atgatctCTCAGGGa UCCCUGAG m7b Disrupted HHHNA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-4324 atgatcTCTCAGGGa CCCUGAGA m8a Disrupted HHHNA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-4766-5p atgatCTTTCAGgga UCUGAAAG m7b Created HHHNA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-6761-5p atgatCTCTCAGgga UCUGAGAG m7b Disrupted HHHNA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-125a-5p atgatctCTCAGGGa UCCCUGAG m7b Disrupted HHHSA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-125b-5p atgatctCTCAGGGa UCCCUGAG m7b Disrupted HHHSA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-345-3p atgatctTTCAGGGa GCCCUGAA m7b Created HHHSA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-4319 atgatctCTCAGGGa UCCCUGAG m7b Disrupted HHHSA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-4324 atgatcTCTCAGGGa CCCUGAGA m8a Disrupted HHHSA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-4766-5p atgatCTTTCAGgga UCUGAAAG m7b Created HHHSA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-6761-5p atgatCTCTCAGgga UCUGAGAG m7b Disrupted HHHSA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-125a-5p atgatctCTCAGGGa UCCCUGAG m7b Disrupted HHHNA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-125b-5p atgatctCTCAGGGa UCCCUGAG m7b Disrupted HHHNA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-345-3p atgatctTTCAGGGa GCCCUGAA m7b Created HHHNA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-4319 atgatctCTCAGGGa UCCCUGAG m7b Disrupted HHHNA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-4324 atgatcTCTCAGGGa CCCUGAGA m8a Disrupted HHHNA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-4766-5p atgatCTTTCAGgga UCUGAAAG m7b Created HHHNA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-6761-5p atgatCTCTCAGgga UCUGAGAG m7b Disrupted HHHNA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-125a-5p atgatctCTCAGGGa UCCCUGAG m7b Disrupted HHHSA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-125b-5p atgatctCTCAGGGa UCCCUGAG m7b Disrupted HHHSA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-345-3p atgatctTTCAGGGa GCCCUGAA m7b Created HHHSA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-4319 atgatctCTCAGGGa UCCCUGAG m7b Disrupted HHHSA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-4324 atgatcTCTCAGGGa CCCUGAGA m8a Disrupted HHHSA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-4766-5p atgatCTTTCAGgga UCUGAAAG m7b Created HHHSA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-6761-5p atgatCTCTCAGgga UCUGAGAG m7b Disrupted HHHSA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-125a-5p atgatctCTCAGGGa UCCCUGAG m7b Disrupted HHHNA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-125b-5p atgatctCTCAGGGa UCCCUGAG m7b Disrupted HHHNA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-345-3p atgatctTTCAGGGa GCCCUGAA m7b Created HHHNA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-4319 atgatctCTCAGGGa UCCCUGAG m7b Disrupted HHHNA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-4324 atgatcTCTCAGGGa CCCUGAGA m8a Disrupted HHHNA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-4766-5p atgatCTTTCAGgga UCUGAAAG m7b Created HHHNA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-6761-5p atgatCTCTCAGgga UCUGAGAG m7b Disrupted HHHNA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-125a-5p atgatctCTCAGGGa UCCCUGAG m7b Disrupted HHHSA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-125b-5p atgatctCTCAGGGa UCCCUGAG m7b Disrupted HHHSA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-345-3p atgatctTTCAGGGa GCCCUGAA m7b Created HHHSA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-4319 atgatctCTCAGGGa UCCCUGAG m7b Disrupted HHHSA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-4324 atgatcTCTCAGGGa CCCUGAGA m8a Disrupted HHHSA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-4766-5p atgatCTTTCAGgga UCUGAAAG m7b Created HHHSA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489
hsa-miR-6761-5p atgatCTCTCAGgga UCUGAGAG m7b Disrupted HHHSA_21568_LRRC69|NM_001129890|exon_CDS|-3.61742555540274|0.180826156372489

Mutation Mutation ID Sample Name Cancer Type
chr8:g.91175685A>G COSN2297919 RK133_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-130a-3p tggTTGCACTtcgaa CAGUGCAA m7b Disrupted HPSD3_9802_G13267.1_92187924
hsa-miR-130b-3p tggTTGCACTtcgaa CAGUGCAA m7b Disrupted HPSD3_9802_G13267.1_92187924
hsa-miR-301a-3p tggTTGCACTtcgaa CAGUGCAA m7b Disrupted HPSD3_9802_G13267.1_92187924
hsa-miR-301b-3p tggTTGCACTtcgaa CAGUGCAA m7b Disrupted HPSD3_9802_G13267.1_92187924
hsa-miR-3666 tggTTGCACTtcgaa CAGUGCAA m7b Disrupted HPSD3_9802_G13267.1_92187924
hsa-miR-4295 tggTTGCACTtcgaa CAGUGCAA m7b Disrupted HPSD3_9802_G13267.1_92187924
hsa-miR-454-3p tggTTGCACTtcgaa UAGUGCAA m7b Disrupted HPSD3_9802_G13267.1_92187924
hsa-miR-519a-3p tggtTGCACTTcgaa AAAGUGCA m7b Disrupted HPSD3_9802_G13267.1_92187924
hsa-miR-519b-3p tggtTGCACTTcgaa AAAGUGCA m7b Disrupted HPSD3_9802_G13267.1_92187924
hsa-miR-519c-3p tggtTGCACTTcgaa AAAGUGCA m7b Disrupted HPSD3_9802_G13267.1_92187924
hsa-miR-7706 tggttGCGCTTCgaa UGAAGCGC m7b Created HPSD3_9802_G13267.1_92187924

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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