SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0056650
Gene Symbol: LRP1B
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.141768346G>A COSN4985633 SS6003323 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5571-5p taatattGAGAATTc CAAUUCUC m7b Disrupted HHFCT_83887_cluster-13926_63_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.141745556G>A COSN9064773 AOCS-112-1-2 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1254 agtTCCAGGCctggc AGCCUGGA m7b Disrupted HHFCT_83881_cluster-13926_57_8
hsa-miR-3116 agtTCCAGGCctggc UGCCUGGA m7b Disrupted HHFCT_83881_cluster-13926_57_8
hsa-miR-4650-5p agttccAGGCCTGgc UCAGGCCU m7b Disrupted HHFCT_83881_cluster-13926_57_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.141719400T>A COSN4985620 SS6003113 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3607-3p taTTTACAGacctac ACUGUAAA m7b (m6b->m7b) HHFKP_77869_cluster-13926_37_8
hsa-miR-3686 tatTTACAGAcctac AUCUGUAA m7b Created HHFKP_77869_cluster-13926_37_8
hsa-miR-370-5p tatttacTGACCTac CAGGUCAC m6b Disrupted HHFKP_77869_cluster-13926_37_8
hsa-miR-545-5p taTTTACTGAcctac UCAGUAAA m8a Disrupted HHFKP_77869_cluster-13926_37_8
hsa-miR-6503-5p tatttaCAGACCTac AGGUCUGC m7a Created HHFKP_77869_cluster-13926_37_8
hsa-miR-6753-3p tatttACAGACCtac UGGUCUGU m7b Created HHFKP_77869_cluster-13926_37_8
hsa-miR-7107-3p tatttACAGACCtac UGGUCUGU m7b Created HHFKP_77869_cluster-13926_37_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.141699931C>A COSN6193582 RK205_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-141-5p aaatcaGAAGATGac CAUCUUCC m7a Created HHFCT_83876_cluster-13926_52_19
hsa-miR-3182 aaatCAGAAGatgac GCUUCUGU m6b Created HHFCT_83876_cluster-13926_52_19
hsa-miR-3192-3p aaATCAGAagatgac CUCUGAUC m6b Created HHFCT_83876_cluster-13926_52_19
hsa-miR-3692-5p aaatCAGCAGatgac CCUGCUGG m6b Disrupted HHFCT_83876_cluster-13926_52_19
hsa-miR-452-3p aaatcagCAGATGAc CUCAUCUG m7b Disrupted HHFCT_83876_cluster-13926_52_19
hsa-miR-4686 aaatcAGCAGATgac UAUCUGCU m7b Disrupted HHFCT_83876_cluster-13926_52_19
hsa-miR-4762-3p aaATCAGAAGatgac CUUCUGAU m8a Created HHFCT_83876_cluster-13926_52_19
hsa-miR-6071 aaatCAGCAGAtgac UUCUGCUG m7b Disrupted HHFCT_83876_cluster-13926_52_19
hsa-miR-93-3p aaaTCAGCAGatgac ACUGCUGA m7b Disrupted HHFCT_83876_cluster-13926_52_19

Mutation Mutation ID Sample Name Cancer Type
chr2:g.141698091T>C COSN5126593 PD4248a [NS][NS][NS][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3974 cagtcacTGACCTTt AAAGGUCA m7b Disrupted HHFKP_77866_cluster-13926_34_8
hsa-miR-4276 cagTCACTGAccttt CUCAGUGA m7b Disrupted HHFKP_77866_cluster-13926_34_8
hsa-miR-4697-3p cagtCACTGACcttt UGUCAGUG m7b Disrupted HHFKP_77866_cluster-13926_34_8
hsa-miR-5190 caGTCACTGaccttt CCAGUGAC m7b (m7b->m6b) HHFKP_77866_cluster-13926_34_8
hsa-miR-598-5p cagTCACCGaccttt GCGGUGAU m6b Created HHFKP_77866_cluster-13926_34_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.141659520A>T COSN8759563 SS6003121 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5580-3p cagCATATGTcattg CACAUAUG m7b Created HHFCT_83867_cluster-13926_43_9

Mutation Mutation ID Sample Name Cancer Type
chr2:g.141642946A>T COSN9064722 AOCS-137-3-7 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-338-5p accctttTATTGTat AACAAUAU m6b Created HHFCT_83864_cluster-13926_40_8
hsa-miR-7849-3p accctttAATTGTat GACAAUUG m6b Disrupted HHFCT_83864_cluster-13926_40_8
hsa-miR-95-5p accctTTTATTGtat UCAAUAAA m7b Created HHFCT_83864_cluster-13926_40_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.141637188T>G COSN8269887 ASHPC_0017_Pa_P [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4293 ttccTCAGGCTGaac CAGCCUGA m8a Created HHFCT_83863_cluster-13926_39_8
hsa-miR-4310 ttcctcATGCTGaac GCAGCAUU m6b Disrupted HHFCT_83863_cluster-13926_39_8
hsa-miR-544b ttCCTCAGGctgaac ACCUGAGG m7b (m6b->m7b) HHFCT_83863_cluster-13926_39_8
hsa-miR-7157-5p ttcctcATGCTGAac UCAGCAUU m7a Disrupted HHFCT_83863_cluster-13926_39_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.141618682T>A COSN9064706 AOCS-059-1-8 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4796-3p gCCACTTTcactgct UAAAGUGG m7b Disrupted HPCB1_23583_G29849.1_142376243
hsa-miR-526b-3p gcCACTTTCactgct GAAAGUGC m7a (m7a->m6a) HPCB1_23583_G29849.1_142376243
hsa-miR-6499-3p gccacttACACTGCt AGCAGUGU m7b Created HPCB1_23583_G29849.1_142376243
hsa-miR-4796-3p gCCACTTTcactgct UAAAGUGG m7b Disrupted HPKTA_36860_G39638.1_142376243
hsa-miR-526b-3p gcCACTTTCactgct GAAAGUGC m7a (m7a->m6a) HPKTA_36860_G39638.1_142376243
hsa-miR-6499-3p gccacttACACTGCt AGCAGUGU m7b Created HPKTA_36860_G39638.1_142376243
hsa-miR-4796-3p gCCACTTTcactgct UAAAGUGG m7b Disrupted HPRO6_46991_G55702.1_142376243
hsa-miR-526b-3p gcCACTTTCactgct GAAAGUGC m7a (m7a->m6a) HPRO6_46991_G55702.1_142376243
hsa-miR-6499-3p gccacttACACTGCt AGCAGUGU m7b Created HPRO6_46991_G55702.1_142376243

Mutation Mutation ID Sample Name Cancer Type
chr2:g.141618674G>A COSN15109795 SM-4B296 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5680 cactgctATTTCTat GAGAAAUG m6b Created HPCB1_23583_G29849.1_142376243
hsa-miR-5680 cactgctATTTCTat GAGAAAUG m6b Created HPKTA_36860_G39638.1_142376243
hsa-miR-5680 cactgctATTTCTat GAGAAAUG m6b Created HPRO6_46991_G55702.1_142376243

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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