SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0056646
Gene Symbol: LRP1B
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.141410951T>G COSN8555002 tumor_4135099 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-142-5p cACTTTATttttttt CAUAAAGU m7b Disrupted HPRT3_14299_G18925.1_142168511
hsa-miR-548ae-3p cactttAGTTTTTtt CAAAAACU m7b Created HPRT3_14299_G18925.1_142168511
hsa-miR-548ah-3p cactttAGTTTTTtt CAAAAACU m7b Created HPRT3_14299_G18925.1_142168511
hsa-miR-548aj-3p cactttAGTTTTTtt UAAAAACU m7b Created HPRT3_14299_G18925.1_142168511
hsa-miR-548am-3p cactttAGTTTTTtt CAAAAACU m7b Created HPRT3_14299_G18925.1_142168511
hsa-miR-548aq-3p cactttAGTTTTTtt CAAAAACU m7b Created HPRT3_14299_G18925.1_142168511
hsa-miR-548j-3p cactttAGTTTTTtt CAAAAACU m7b Created HPRT3_14299_G18925.1_142168511
hsa-miR-548x-3p cactttAGTTTTTtt UAAAAACU m7b Created HPRT3_14299_G18925.1_142168511
hsa-miR-5590-3p cACTTTATTtttttt AAUAAAGU m8a (m8a->m7a) HPRT3_14299_G18925.1_142168511

Mutation Mutation ID Sample Name Cancer Type
chr2:g.141377951G>T COSN8759502 SS6003149 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-218-5p attaaAAGCACAgat UUGUGCUU m7b Disrupted HHFCT_83847_cluster-13926_23_8
hsa-miR-3140-3p attAAAAGCacagat AGCUUUUG m6b Disrupted HHFCT_83847_cluster-13926_23_8
hsa-miR-4679 attaaaATCACAGAt UCUGUGAU m8a Created HHFCT_83847_cluster-13926_23_8
hsa-miR-5008-3p attaaaAGCACAGat CCUGUGCU m7b Disrupted HHFCT_83847_cluster-13926_23_8
hsa-miR-6737-3p attaaaAGCACAGAt UCUGUGCU m8a Disrupted HHFCT_83847_cluster-13926_23_8
hsa-miR-7157-3p attaaaAGCACAGAt UCUGUGCU m8a Disrupted HHFCT_83847_cluster-13926_23_8
hsa-miR-8070 attaaAATCACAgat AUGUGAUU m7b Created HHFCT_83847_cluster-13926_23_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.141353599T>G COSN15237514 LP6005334-DNA_E03 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-495-3p gagcataGTTTGTTt AAACAAAC m7b Created HHFCT_83843_cluster-13926_19_6
hsa-miR-5688 gagcataGTTTGTTt UAACAAAC m7b Created HHFCT_83843_cluster-13926_19_6

Mutation Mutation ID Sample Name Cancer Type
chr2:g.141319475T>C COSN15031179 LP6005334-DNA_F03 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-377-5p cctCAACCTCagtgt AGAGGUUG m7b Created HHFCT_83842_cluster-13926_18_14
hsa-miR-382-5p cctCAACTTCagtgt GAAGUUGU m7a Disrupted HHFCT_83842_cluster-13926_18_14
hsa-miR-495-5p cctCAACTTCagtgt GAAGUUGC m7a Disrupted HHFCT_83842_cluster-13926_18_14
hsa-miR-6086 cctCAACCTCagtgt GGAGGUUG m7b Created HHFCT_83842_cluster-13926_18_14
hsa-miR-655-5p cctcAACCTCagtgt AGAGGUUA m6b Created HHFCT_83842_cluster-13926_18_14
hsa-miR-7162-3p cctcaACCTCAGtgt UCUGAGGU m7b Created HHFCT_83842_cluster-13926_18_14

Mutation Mutation ID Sample Name Cancer Type
chr2:g.141062215G>C COSM1528368 TCGA-97-7937-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6729-3p catggatGGGATGAa UCAUCCCC m7a Disrupted HPSD3_5956_G7957.1_141819786

Mutation Mutation ID Sample Name Cancer Type
chr2:g.141062206C>T COSM352114 TCGA-A6-6649-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-375 gatgaacCGAACAAg UUUGUUCG m7b Disrupted HPSD3_5956_G7957.1_141819786
hsa-miR-4277 gatGAACTGaacaag GCAGUUCU m6b Created HPSD3_5956_G7957.1_141819786
hsa-miR-5000-5p gaTGAACTGaacaag CAGUUCAG m7a (m6a->m7a) HPSD3_5956_G7957.1_141819786
hsa-miR-584-3p gatGAACTGAacaag UCAGUUCC m7a Created HPSD3_5956_G7957.1_141819786
hsa-miR-6070 gatGAACCGaacaag CCGGUUCC m6b Disrupted HPSD3_5956_G7957.1_141819786

Mutation Mutation ID Sample Name Cancer Type
chr2:g.141062205G>A COSM1007086 TCGA-B5-A0JY-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-375 atgaacCGAACAAgg UUUGUUCG m7b Disrupted HPSD3_5956_G7957.1_141819786
hsa-miR-659-3p atGAACCAAacaagg CUUGGUUC m7b (m6b->m7b) HPSD3_5956_G7957.1_141819786
hsa-miR-6740-5p atgaaCCAAACaagg AGUUUGGG m6b Created HPSD3_5956_G7957.1_141819786

Mutation Mutation ID Sample Name Cancer Type
chr2:g.141062202C>T COSM3701947 RK088_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-362-5p aaccgaaCAAGGATa AAUCCUUG m7b Disrupted HPSD3_5956_G7957.1_141819786
hsa-miR-375 aacCGAACAAggata UUUGUUCG m7b Disrupted HPSD3_5956_G7957.1_141819786
hsa-miR-500b-5p aaccgaaCAAGGATa AAUCCUUG m7b Disrupted HPSD3_5956_G7957.1_141819786
hsa-miR-502-5p aaccgaaCAAGGATa AUCCUUGC m7a Disrupted HPSD3_5956_G7957.1_141819786

Mutation Mutation ID Sample Name Cancer Type
chr2:g.141055173C>T COSM4893689 TCGA-RP-A694-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3691-3p caaaACTTGGacttg ACCAAGUC m6b Created HHFCT_83837_cluster-13926_13_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.141055171G>T COSM1528370 TCGA-50-5946-02 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6882-5p aaactcgGACTTGTc UACAAGUC m7b Disrupted HHFCT_83837_cluster-13926_13_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.141055171G>A COSM3567265 TCGA-FR-A3YN-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4444 aAACTCGAacttgtc CUCGAGUU m7b Created HHFCT_83837_cluster-13926_13_8
hsa-miR-6882-5p aaactcgGACTTGTc UACAAGUC m7b Disrupted HHFCT_83837_cluster-13926_13_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.141055168T>G COSM4774261 GC_383T-GC_383N [stomach][NS][carcinoma][diffuse_adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1273c ctcggacTTGTCGCt GGCGACAA m7b Disrupted HHFCT_83837_cluster-13926_13_8
hsa-miR-6882-5p ctcgGACTTGTcgct UACAAGUC m7b Disrupted HHFCT_83837_cluster-13926_13_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.141055166G>A COSM249601 K257 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1273c cggacTTGTCGCtgc GGCGACAA m7b Disrupted HHFCT_83837_cluster-13926_13_8
hsa-miR-6882-5p cgGACTTGTcgctgc UACAAGUC m7b (m7b->m6b) HHFCT_83837_cluster-13926_13_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.141055158A>C COSM4698853 T3021 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1184 tcGCTGCAGGactgg CCUGCAGC m8a Disrupted HHFCT_83837_cluster-13926_13_8
hsa-miR-1910-5p tcgctgcAGGACTGg CCAGUCCU m7b Disrupted HHFCT_83837_cluster-13926_13_8
hsa-miR-3158-5p tcgCTGCAGGactgg CCUGCAGA m7a Disrupted HHFCT_83837_cluster-13926_13_8
hsa-miR-6838-3p tcgctgCAGGACTgg AAGUCCUG m7b Disrupted HHFCT_83837_cluster-13926_13_8
hsa-miR-885-3p tCGCTGCCggactgg AGGCAGCG m7b Created HHFCT_83837_cluster-13926_13_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.141055153T>A COSM475968 TCGA-B0-5812-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1910-5p gcAGGACTGGcttca CCAGUCCU m8a Disrupted HHFCT_83837_cluster-13926_13_8
hsa-miR-214-5p gcagGACAGGCttca UGCCUGUC m7b Created HHFCT_83837_cluster-13926_13_8
hsa-miR-4676-5p gcaggACTGGCTtca GAGCCAGU m7b Disrupted HHFCT_83837_cluster-13926_13_8
hsa-miR-4786-3p gcaggacTGGCTTCa UGAAGCCA m7b Disrupted HHFCT_83837_cluster-13926_13_8
hsa-miR-575 gcaggACTGGCTtca GAGCCAGU m7b Disrupted HHFCT_83837_cluster-13926_13_8
hsa-miR-6748-3p gcaGGACAGGcttca UCCUGUCC m7b Created HHFCT_83837_cluster-13926_13_8
hsa-miR-6838-3p gCAGGACTggcttca AAGUCCUG m7b Disrupted HHFCT_83837_cluster-13926_13_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.141055147C>T COSM3894884 TCGA-EE-A2A1-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-127-5p ctgGCTTCAacttgg CUGAAGCU m6b Disrupted HHFCT_83837_cluster-13926_13_8
hsa-miR-4786-3p cTGGCTTCAacttgg UGAAGCCA m8a (m8a->m7a) HHFCT_83837_cluster-13926_13_8
hsa-miR-7843-3p ctGGCTTCAacttgg AUGAAGCC m7b (m7b->m6b) HHFCT_83837_cluster-13926_13_8
hsa-miR-9-3p ctgGCTTTAacttgg AUAAAGCU m6b Created HHFCT_83837_cluster-13926_13_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.141055147C>G COSM4847252 TCGA-JW-A5VL-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-127-5p ctgGCTTCAacttgg CUGAAGCU m6b Disrupted HHFCT_83837_cluster-13926_13_8
hsa-miR-4786-3p cTGGCTTCAacttgg UGAAGCCA m8a (m8a->m7a) HHFCT_83837_cluster-13926_13_8
hsa-miR-498 ctgGCTTGAActtgg UUUCAAGC m7b Created HHFCT_83837_cluster-13926_13_8
hsa-miR-7843-3p ctGGCTTCAacttgg AUGAAGCC m7b (m7b->m6b) HHFCT_83837_cluster-13926_13_8
Mutation Mutation ID Sample Name Cancer Type
chr2:g.141055145A>T COSM1641657 pfg024T [stomach][NS][adenocarcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr2:g.141055139G>T COSM3798013 TCGA-GV-A3QF-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3691-3p aACTTGGTaagtgat ACCAAGUC m7a Created HHFCT_83837_cluster-13926_13_8
hsa-miR-6814-5p aaCTTGGGAagtgat UCCCAAGG m7a (m7a->m6a) HHFCT_83837_cluster-13926_13_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.140995011A>C COSN15123565 SM-4B296 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3154 ccccttCCCTTCTca CAGAAGGG m7b Created HHFCT_83835_cluster-13926_11_7
hsa-miR-3202 cCCCTTCCcttctca UGGAAGGG m7b Created HHFCT_83835_cluster-13926_11_7
hsa-miR-4747-5p ccCCTTCCCTtctca AGGGAAGG m8a Created HHFCT_83835_cluster-13926_11_7
hsa-miR-5196-5p ccCCTTCCCTtctca AGGGAAGG m8a Created HHFCT_83835_cluster-13926_11_7
hsa-miR-6770-5p ccccttcCCTTCTCa UGAGAAGG m7b Created HHFCT_83835_cluster-13926_11_7
hsa-miR-6864-5p cCCCTTCActtctca UUGAAGGG m7b Disrupted HHFCT_83835_cluster-13926_11_7
hsa-miR-7515 cccctTCCCTTCTca AGAAGGGA m8a Created HHFCT_83835_cluster-13926_11_7
hsa-miR-9500 cccCTTCCCTTctca AAGGGAAG m8a Created HHFCT_83835_cluster-13926_11_7

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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