SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0056645
Gene Symbol: LRP1B
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.142130678G>T COSM4085239 TCGA-FP-7829-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-221-5p gccgatTGCCAGGgt ACCUGGCA m7b Disrupted HHFCT_83948_cluster-13926_125_9
hsa-miR-3128 gccgaTTGCCAGggt UCUGGCAA m7b Disrupted HHFCT_83948_cluster-13926_125_9
hsa-miR-4308 gccgattTCCAGGGt UCCCUGGA m7b Created HHFCT_83948_cluster-13926_125_9
hsa-miR-5093 gccgATTTCCagggt AGGAAAUG m6b Created HHFCT_83948_cluster-13926_125_9
hsa-miR-8073 gccgatTGCCAGGgt ACCUGGCA m7b Disrupted HHFCT_83948_cluster-13926_125_9
hsa-miR-875-3p gccgaTTTCCAGGgt CCUGGAAA m8a Created HHFCT_83948_cluster-13926_125_9

Mutation Mutation ID Sample Name Cancer Type
chr2:g.142130666A>G COSM266851 TCGA-AA-3672-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3065-3p GGTGCTGAccgtggg UCAGCACC m8a Disrupted HHFCT_83948_cluster-13926_125_9

Mutation Mutation ID Sample Name Cancer Type
chr2:g.142130663G>A COSM4698862 T2940 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2116-3p gctgaccATGGGAGc CCUCCCAU m7b Created HHFCT_83948_cluster-13926_125_9
hsa-miR-532-3p gctgaccGTGGGAGc CCUCCCAC m7b Disrupted HHFCT_83948_cluster-13926_125_9

Mutation Mutation ID Sample Name Cancer Type
chr2:g.142117949T>G COSN8759665 SS6003115 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1909-5p atGGCACTCAgacat UGAGUGCC m8a Disrupted HHFKP_77884_cluster-13926_52_8
hsa-miR-4288 atggcacGCAGACAt UUGUCUGC m7b Created HHFKP_77884_cluster-13926_52_8
hsa-miR-4520-5p atggCACGCAGacat CCUGCGUG m7b Created HHFKP_77884_cluster-13926_52_8
hsa-miR-515-3p atGGCACTCagacat GAGUGCCU m7a (m7a->m6a) HHFKP_77884_cluster-13926_52_8
hsa-miR-632 atggcacGCAGACAt GUGUCUGC m7b Created HHFKP_77884_cluster-13926_52_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.142090560G>A COSN7343952 8068600 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4666a-3p ttccagcATTGTATa CAUACAAU m7b Created HHFCT_83930_cluster-13926_107_7

Mutation Mutation ID Sample Name Cancer Type
chr2:g.142061544C>T COSN14601085 8051900 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4802-3p gtcttgTCCATGTtc UACAUGGA m7b Disrupted HHFCT_83923_cluster-13926_100_9
hsa-miR-4802-3p gtcttgTCCATGTtc UACAUGGA m7b Disrupted HHFCT_83923_cluster-13926_100_9
hsa-miR-4802-3p gtcttgTCCATGTtc UACAUGGA m7b Disrupted HHFCT_83923_cluster-13926_100_9

Mutation Mutation ID Sample Name Cancer Type
chr2:g.142061540G>A COSN1793677 RK065_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-186-5p tgtccatATTCTTTg CAAAGAAU m7b Created HHFCT_83923_cluster-13926_100_9
hsa-miR-3133 tgtccatGTTCTTTg UAAAGAAC m7b Disrupted HHFCT_83923_cluster-13926_100_9
hsa-miR-4802-3p tgTCCATGTtctttg UACAUGGA m7b (m7b->m6b) HHFCT_83923_cluster-13926_100_9
hsa-miR-5583-3p tgtCCATATTCtttg GAAUAUGG m8a Created HHFCT_83923_cluster-13926_100_9
hsa-miR-6507-5p tgtccaTATTCTTtg GAAGAAUA m7b Created HHFCT_83923_cluster-13926_100_9
hsa-miR-8076 tgTCCATATtctttg UAUAUGGA m7b (m6b->m7b) HHFCT_83923_cluster-13926_100_9

Mutation Mutation ID Sample Name Cancer Type
chr2:g.142055677G>T COSN7343926 8062308 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-192-5p tcactaAGGTCAaca CUGACCUA m6b Disrupted HHFCT_83921_cluster-13926_98_8
hsa-miR-215-5p tcactaAGGTCAaca AUGACCUA m6b Disrupted HHFCT_83921_cluster-13926_98_8
hsa-miR-489-3p tcactaATGTCAaca GUGACAUC m6b Created HHFCT_83921_cluster-13926_98_8
hsa-miR-6759-3p tcactAAGGTCAaca UGACCUUU m7a Disrupted HHFCT_83921_cluster-13926_98_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.142051612C>G COSN15024190 LP6005409-DNA_A02 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3199 ctatAGTCCCagcta AGGGACUG m6b Disrupted HHFCT_83919_cluster-13926_96_8
hsa-miR-365a-5p ctatAGTCCCagcta AGGGACUU m6b Disrupted HHFCT_83919_cluster-13926_96_8
hsa-miR-365b-5p ctatAGTCCCagcta AGGGACUU m6b Disrupted HHFCT_83919_cluster-13926_96_8
hsa-miR-625-3p CTATAGTCccagcta GACUAUAG m8a Disrupted HHFCT_83919_cluster-13926_96_8
hsa-miR-6503-3p ctaTAGTCCCagcta GGGACUAG m7a Disrupted HHFCT_83919_cluster-13926_96_8
hsa-miR-8052 ctatAGTCCCagcta CGGGACUG m6b Disrupted HHFCT_83919_cluster-13926_96_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.142045120G>A COSN9064911 AOCS-086-3-2 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-323a-3p ttGTAATGTagaaaa CACAUUAC m7b (m7b->m6b) HHFCT_83918_cluster-13926_95_8
hsa-miR-4482-3p ttgtaatATAGAAAa UUUCUAUU m7a Created HHFCT_83918_cluster-13926_95_8
hsa-miR-556-3p ttGTAATATagaaaa AUAUUACC m7a (m6a->m7a) HHFCT_83918_cluster-13926_95_8
hsa-miR-656-3p ttgTAATATagaaaa AAUAUUAU m6b Created HHFCT_83918_cluster-13926_95_8
hsa-miR-7159-3p ttgtaatATAGAAAa UUUCUAUG m7a Created HHFCT_83918_cluster-13926_95_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.142003710G>A COSN1793652 RK159_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1185-1-3p aCTGTATATctgttt AUAUACAG m8a (m7a->m8a) HHFCT_83914_cluster-13926_91_8
hsa-miR-1185-2-3p aCTGTATATctgttt AUAUACAG m8a (m7a->m8a) HHFCT_83914_cluster-13926_91_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.141952703C>A COSN8269977 PCSI_0312_Pa_P_526 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3662 gtggtaCATTTTaag GAAAAUGA m6b Created HHFCT_83905_cluster-13926_82_8
hsa-miR-548m gtggTACCTTTtaag CAAAGGUA m7b Disrupted HHFCT_83905_cluster-13926_82_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.141944798A>C COSN145107
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-323a-5p aaACCACCaagatgc AGGUGGUC m6b Created HHFCT_83903_cluster-13926_80_8
hsa-miR-6844 aaaccACAAAGAtgc UUCUUUGU m7b Disrupted HHFCT_83903_cluster-13926_80_8
hsa-miR-876-3p aAACCACCAagatgc UGGUGGUU m8a (m7a->m8a) HHFCT_83903_cluster-13926_80_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.140989640G>T COSM4762160 pfg115T [stomach][NS][carcinoma][mixed_intestinal_and_diffuse_adenocarcinoma-unclassifiable]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4436a cTGTCCTGatgatca GCAGGACA m7b Disrupted HHFCT_83834_cluster-13926_10_8
hsa-miR-5000-3p cTGTCCTGAtgatca UCAGGACA m8a (m8a->m7a) HHFCT_83834_cluster-13926_10_8
hsa-miR-6816-3p ctGTCCTTatgatca GAAGGACC m6b Created HHFCT_83834_cluster-13926_10_8
hsa-miR-8080 cTGTCCTTatgatca GAAGGACA m7b Created HHFCT_83834_cluster-13926_10_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.140989640G>C COSM716553 TCGA-56-6546-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1224-5p ctGTCCTCAtgatca GUGAGGAC m7b (m6b->m7b) HHFCT_83834_cluster-13926_10_8
hsa-miR-4436a cTGTCCTGatgatca GCAGGACA m7b Disrupted HHFCT_83834_cluster-13926_10_8
hsa-miR-4751 ctGTCCTCatgatca AGAGGACC m6b Created HHFCT_83834_cluster-13926_10_8
hsa-miR-5000-3p cTGTCCTGAtgatca UCAGGACA m8a (m8a->m7a) HHFCT_83834_cluster-13926_10_8
hsa-miR-5004-5p cTGTCCTCAtgatca UGAGGACA m8a (m7a->m8a) HHFCT_83834_cluster-13926_10_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.140989637G>A COSM1691123 YUAKER [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-374a-3p tcCTGATAAtcagtt CUUAUCAG m7b (m6b->m7b) HHFCT_83834_cluster-13926_10_8
hsa-miR-3920 tcctgaTAATCAGTt ACUGAUUA m8a Created HHFCT_83834_cluster-13926_10_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.140989634C>A COSM1528378 TCGA-73-4668-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548av-3p tgatgatCAGTTTaa AAAACUGC m6b Disrupted HHFCT_83834_cluster-13926_10_8
hsa-miR-548g-3p tgatgatCAGTTTaa AAAACUGU m6b Disrupted HHFCT_83834_cluster-13926_10_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.140989619A>G COSM173790 TCGA-AG-A002-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4778-5p atgcCAGAATaatcg AAUUCUGU m6b Disrupted HHFCT_83834_cluster-13926_10_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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