SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0056629
Gene Symbol: LRP1B
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.140843161A>T COSN7342937 8068976 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-664a-3p AATGAATAaaaggat UAUUCAUU m8a Disrupted HHFCT_83829_cluster-13926_5_8

Mutation Mutation ID Sample Name Cancer Type
chr2:g.140700326C>T COSM1399730 TCGA-A6-6141-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-10a-3p acCGAATTTtttaca CAAAUUCG m7b (m6b->m7b) HHFCT_83828_cluster-13926_4_6
Mutation Mutation ID Sample Name Cancer Type
chr2:g.140700326C>A COSM3938526 ESCC-210T [oesophagus][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr2:g.140700320C>A COSM716579 TCGA-18-3415-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1183 tctttTACAGTGatg CACUGUAG m7a Disrupted HHFCT_83828_cluster-13926_4_6
hsa-miR-6760-3p tcttttACAGTGatg ACACUGUC m6b Disrupted HHFCT_83828_cluster-13926_4_6
hsa-miR-3607-3p tctTTTACAGTgatg ACUGUAAA m8a Disrupted HHFCT_83828_cluster-13926_4_6

Mutation Mutation ID Sample Name Cancer Type
chr2:g.140700303G>A COSM4555970 CSCC-11-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-607 cacTTTGAAaatata GUUCAAAU m6b Created HHFCT_83828_cluster-13926_4_6

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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