SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_018557
Gene Symbol: LRP1B
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.140234835C>T COSM1006979 TCGA-AP-A0LM-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4467 cacacagCGCCGCCc UGGCGGCG m7b Disrupted HHFKP_77836_cluster-13926_4_6
hsa-miR-892a cACACAGTGccgccc CACUGUGU m8a (m7a->m8a) HHFKP_77836_cluster-13926_4_6

Mutation Mutation ID Sample Name Cancer Type
chr2:g.140234835C>A COSM321448 2334193 [lung][NS][carcinoma][small_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4467 cacacagCGCCGCCc UGGCGGCG m7b Disrupted HHFKP_77836_cluster-13926_4_6
hsa-miR-6741-3p cacacAGAGCCGccc UCGGCUCU m7b Created HHFKP_77836_cluster-13926_4_6
hsa-miR-760 cacaCAGAGCCGccc CGGCUCUG m8a Created HHFKP_77836_cluster-13926_4_6

Mutation Mutation ID Sample Name Cancer Type
chr2:g.140234832C>T COSM1006978 TCGA-D1-A0ZO-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1228-5p acagcgCCGCCCAtc GUGGGCGG m7b Disrupted HHFKP_77836_cluster-13926_4_6
hsa-miR-4467 acagCGCCGCCcatc UGGCGGCG m7b Disrupted HHFKP_77836_cluster-13926_4_6
hsa-miR-885-3p acagCGCTGCCcatc AGGCAGCG m7b Created HHFKP_77836_cluster-13926_4_6

Mutation Mutation ID Sample Name Cancer Type
chr2:g.140234831G>A COSM1006977 TCGA-BS-A0U7-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1228-5p cagcgCCGCCCAtct GUGGGCGG m7b Disrupted HHFKP_77836_cluster-13926_4_6
hsa-miR-363-5p cagcgCCACCCatct CGGGUGGA m6b Created HHFKP_77836_cluster-13926_4_6
hsa-miR-4467 cagCGCCGCCcatct UGGCGGCG m7b Disrupted HHFKP_77836_cluster-13926_4_6
hsa-miR-4483 cagcgCCACCCatct GGGGUGGU m6b Created HHFKP_77836_cluster-13926_4_6
hsa-miR-6756-5p cagcgCCACCCatct AGGGUGGG m6b Created HHFKP_77836_cluster-13926_4_6
hsa-miR-6766-5p cagcgCCACCCatct CGGGUGGG m6b Created HHFKP_77836_cluster-13926_4_6

Mutation Mutation ID Sample Name Cancer Type
chr2:g.140234828C>T COSM3567098 TCGA-ER-A194-01 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1228-5p cgCCGCCCAtctacc GUGGGCGG m7b (m7b->m6b) HHFKP_77836_cluster-13926_4_6
hsa-miR-3935 cgccgccTATCTACc UGUAGAUA m7b Created HHFKP_77836_cluster-13926_4_6

Mutation Mutation ID Sample Name Cancer Type
chr2:g.140234828C>A COSM4966674 CPCG0006-F1 [prostate][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1228-5p cgCCGCCCAtctacc GUGGGCGG m7b (m7b->m6b) HHFKP_77836_cluster-13926_4_6
hsa-miR-376a-2-5p cgccgccAATCTACc GGUAGAUU m7b Created HHFKP_77836_cluster-13926_4_6
hsa-miR-4467 CGCCGCCAatctacc UGGCGGCG m8a Created HHFKP_77836_cluster-13926_4_6
hsa-miR-4730 cgCCGCCAatctacc CUGGCGGA m6b Created HHFKP_77836_cluster-13926_4_6
hsa-miR-6770-3p cGCCGCCAatctacc CUGGCGGC m7b Created HHFKP_77836_cluster-13926_4_6
Mutation Mutation ID Sample Name Cancer Type
chr2:g.140234827A>NA COSM392042 LUAD-NYU669 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr2:g.140234827A>G COSM570197 TCGA-05-4389-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3529-5p gccgcccGTCTACCt AGGUAGAC m7b Created HHFKP_77836_cluster-13926_4_6
hsa-miR-379-5p gccgcccGTCTACCt UGGUAGAC m7b Created HHFKP_77836_cluster-13926_4_6
hsa-miR-483-5p gccgCCCGTCTacct AAGACGGG m7b Created HHFKP_77836_cluster-13926_4_6

Mutation Mutation ID Sample Name Cancer Type
chr2:g.140234826T>NT COSM391335 LUAD-CHTN-MAD06-00668 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3529-5p ccgcccaTCTACCTa AGGUAGAC m7a Disrupted HHFKP_77836_cluster-13926_4_6
hsa-miR-3927-3p ccgcccaTCTACCTa CAGGUAGA m7b Disrupted HHFKP_77836_cluster-13926_4_6
hsa-miR-4650-3p ccgcccaTCTACCTa AGGUAGAA m7a Disrupted HHFKP_77836_cluster-13926_4_6
hsa-miR-6831-5p ccgcccaTCTACCTa UAGGUAGA m7b Disrupted HHFKP_77836_cluster-13926_4_6

Mutation Mutation ID Sample Name Cancer Type
chr2:g.140234821C>A COSM370503 LUAD-NYU160 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-196a-5p catCTACCTAaactc UAGGUAGU m7a Disrupted HHFKP_77836_cluster-13926_4_6
hsa-miR-196b-5p catCTACCTAaactc UAGGUAGU m7a Disrupted HHFKP_77836_cluster-13926_4_6
hsa-miR-331-5p catcTACCTAaactc CUAGGUAU m6b Disrupted HHFKP_77836_cluster-13926_4_6
hsa-miR-3529-5p caTCTACCTaaactc AGGUAGAC m7a (m7a->m6a) HHFKP_77836_cluster-13926_4_6
hsa-miR-3668 caTCTACATaaactc AAUGUAGA m7b (m6b->m7b) HHFKP_77836_cluster-13926_4_6
hsa-miR-3924 catcTACATAaactc AUAUGUAU m6b Created HHFKP_77836_cluster-13926_4_6
hsa-miR-3927-3p caTCTACCTaaactc CAGGUAGA m7b (m7b->m6b) HHFKP_77836_cluster-13926_4_6
hsa-miR-4650-3p caTCTACCTaaactc AGGUAGAA m7a (m7a->m6a) HHFKP_77836_cluster-13926_4_6
hsa-miR-6509-5p catcTACCTAAactc AUUAGGUA m7b Disrupted HHFKP_77836_cluster-13926_4_6
hsa-miR-6831-5p caTCTACCTAaactc UAGGUAGA m8a Disrupted HHFKP_77836_cluster-13926_4_6
hsa-miR-7852-3p catCTACATAaactc UAUGUAGU m7a Created HHFKP_77836_cluster-13926_4_6

Mutation Mutation ID Sample Name Cancer Type
chr2:g.140234802G>A COSM3567097 TCGA-EE-A3J8-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-140-5p ttgaaagAACCACTa CAGUGGUU m7b Created HHFKP_77836_cluster-13926_4_6
hsa-miR-152-5p ttgaaAGAACCacta AGGUUCUG m6b Created HHFKP_77836_cluster-13926_4_6
hsa-miR-203a-5p ttgaaaGAACCACTa AGUGGUUC m8a Created HHFKP_77836_cluster-13926_4_6
hsa-miR-203b-5p ttgaaagGACCACTa UAGUGGUC m7b Disrupted HHFKP_77836_cluster-13926_4_6
hsa-miR-2116-5p ttgaAAGAACCacta GGUUCUUA m7a Created HHFKP_77836_cluster-13926_4_6
hsa-miR-6718-5p ttgaaagGACCACTa UAGUGGUC m7b Disrupted HHFKP_77836_cluster-13926_4_6

Mutation Mutation ID Sample Name Cancer Type
chr2:g.140234799C>A COSM403756 LUAD-E01317 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-140-5p aaaggACCACTaact CAGUGGUU m6b Disrupted HHFKP_77836_cluster-13926_4_6
hsa-miR-203b-5p aaagGACCACTAact UAGUGGUC m8a Disrupted HHFKP_77836_cluster-13926_4_6
hsa-miR-2355-3p aaAGGACAActaact AUUGUCCU m7b (m6b->m7b) HHFKP_77836_cluster-13926_4_6
hsa-miR-4460 aaaggACCACTAact AUAGUGGU m7b Disrupted HHFKP_77836_cluster-13926_4_6
hsa-miR-4727-3p aaaggaCCACTAact AUAGUGGG m6b Disrupted HHFKP_77836_cluster-13926_4_6
hsa-miR-6718-5p aaagGACCACTAact UAGUGGUC m8a Disrupted HHFKP_77836_cluster-13926_4_6
hsa-miR-676-3p aaAGGACAactaact CUGUCCUA m6b Created HHFKP_77836_cluster-13926_4_6

Mutation Mutation ID Sample Name Cancer Type
chr2:g.140232977C>A COSN5482977 RK060_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-130a-3p agaacTGCACTacag CAGUGCAA m6b Disrupted HHFKP_77835_cluster-13926_3_8
hsa-miR-130b-3p agaacTGCACTacag CAGUGCAA m6b Disrupted HHFKP_77835_cluster-13926_3_8
hsa-miR-143-5p agaACTGCACtacag GGUGCAGU m7b Disrupted HHFKP_77835_cluster-13926_3_8
hsa-miR-301a-3p agaacTGCACTacag CAGUGCAA m6b Disrupted HHFKP_77835_cluster-13926_3_8
hsa-miR-301b-3p agaacTGCACTacag CAGUGCAA m6b Disrupted HHFKP_77835_cluster-13926_3_8
hsa-miR-3666 agaacTGCACTacag CAGUGCAA m6b Disrupted HHFKP_77835_cluster-13926_3_8
hsa-miR-4277 AGAACTGCactacag GCAGUUCU m8a Disrupted HHFKP_77835_cluster-13926_3_8
hsa-miR-4295 agaacTGCACTacag CAGUGCAA m6b Disrupted HHFKP_77835_cluster-13926_3_8
hsa-miR-4671-3p agaacTGCACTAcag UUAGUGCA m7b Disrupted HHFKP_77835_cluster-13926_3_8
hsa-miR-5000-5p agaaCTGAACTacag CAGUUCAG m7b Created HHFKP_77835_cluster-13926_3_8
hsa-miR-6073 agaactgCACTACag GGUAGUGA m6b Disrupted HHFKP_77835_cluster-13926_3_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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