SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0087962
Gene Symbol: LPAR1
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Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr9:g.111014381T>C COSN14973619 LP6005409-DNA_F02 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4707-5p tgcaaaCCGGGGagt GCCCCGGC m6b Created HHFKP_145847_cluster-23469_6_6
hsa-miR-6763-3p tgcaaaCCGGGGAGt CUCCCCGG m8a Created HHFKP_145847_cluster-23469_6_6
hsa-miR-5587-3p tgcaaaCCGGGGagt GCCCCGGG m6b Created HHFKP_145847_cluster-23469_6_6
hsa-miR-4783-3p tgcaaACCGGGGagt CCCCGGUG m7a Created HHFKP_145847_cluster-23469_6_6
hsa-miR-2355-5p tgcaaaCTGGGGAgt AUCCCCAG m7b Disrupted HHFKP_145847_cluster-23469_6_6

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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