SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | hsa_circ_0000468 |
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Gene Symbol: | LNX2 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr13:g.27581588A>G | COSM4652383 | SNU-C4 | [large_intestine][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr13:g.27581563C>A | COSM946445 | TCGA-BG-A0M8-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-370-5p | atgaTGACCTagtct | CAGGUCAC | m6b | Disrupted | HHFCT_40180_cluster-6099_14_8 |
hsa-miR-5000-5p | atgaTGAACTagtct | CAGUUCAG | m6b | Created | HHFCT_40180_cluster-6099_14_8 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr13:g.27581559G>C | COSM4152736 | TCGA-P5-A5EV-01 | [central_nervous_system][brain][glioma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4771 | tgacctAGTCTGCca | AGCAGACU | m7b | Disrupted | HHFCT_40180_cluster-6099_14_8 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr13:g.27581450C>A | COSM1470723 | TCGA-CH-5769-01 | [prostate][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3660 | ttCTGTCAGTtggac | ACUGACAG | m8a | Created | HHFCT_40179_cluster-6099_13_213 |
hsa-miR-4526 | ttCTGTCAGttggac | GCUGACAG | m7b | (m6b->m7b) | HHFCT_40179_cluster-6099_13_213 |
hsa-miR-888-3p | ttcTGTCAGTtggac | GACUGACA | m7b | Created | HHFCT_40179_cluster-6099_13_213 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr13:g.27581436A>T | COSM4046817 | TCGA-BR-8680-01 | [stomach][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1264 | ccggaaAAGACTTca | CAAGUCUU | m7b | Disrupted | HHFCT_40179_cluster-6099_13_213 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr13:g.27581435G>T | COSM946444 | TCGA-AX-A0J0-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1264 | cggaaAAGACTTcat | CAAGUCUU | m7b | Disrupted | HHFCT_40179_cluster-6099_13_213 |
hsa-miR-548ao-5p | cggaaaaTACTTCat | AGAAGUAA | m6b | Created | HHFCT_40179_cluster-6099_13_213 |
hsa-miR-548ax | cggaaaaTACTTCat | AGAAGUAA | m6b | Created | HHFCT_40179_cluster-6099_13_213 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr13:g.27581430C>T | COSM1747388 | B70 | [liver][NS][carcinoma][hepatocellular_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-142-5p | aagACTTTATtttaa | CAUAAAGU | m7b | Created | HHFCT_40179_cluster-6099_13_213 |
hsa-miR-3184-3p | aAGACTTTattttaa | AAAGUCUC | m7a | Created | HHFCT_40179_cluster-6099_13_213 |
hsa-miR-3646 | aagacTTCATTTTaa | AAAAUGAA | m8a | Disrupted | HHFCT_40179_cluster-6099_13_213 |
hsa-miR-3662 | aagactTCATTTTaa | GAAAAUGA | m7b | Disrupted | HHFCT_40179_cluster-6099_13_213 |
hsa-miR-5590-3p | aagACTTTATTttaa | AAUAAAGU | m8a | Created | HHFCT_40179_cluster-6099_13_213 |
hsa-miR-6507-3p | aaGACTTTattttaa | CAAAGUCC | m6b | Created | HHFCT_40179_cluster-6099_13_213 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr13:g.27581360C>A | COSM1677569 | HCC2998 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4694-3p | ttatgTCCATTTtct | CAAAUGGA | m7b | Disrupted | HHKTA_38545_NM_153371|634|673|1.99032528838083|0.172057747027166 |
hsa-miR-489-3p | ttATGTCAattttct | GUGACAUC | m6b | Created | HHKTA_38545_NM_153371|634|673|1.99032528838083|0.172057747027166 |
hsa-miR-4694-3p | ttatgTCCATTTtct | CAAAUGGA | m7b | Disrupted | HPKTA_17181_G18541.1_28155484 |
hsa-miR-489-3p | ttATGTCAattttct | GUGACAUC | m6b | Created | HPKTA_17181_G18541.1_28155484 |
hsa-miR-4694-3p | ttatgTCCATTTtct | CAAAUGGA | m7b | Disrupted | HPRO6_23075_G27024.1_28155484 |
hsa-miR-489-3p | ttATGTCAattttct | GUGACAUC | m6b | Created | HPRO6_23075_G27024.1_28155484 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr13:g.27581354C>G | COSM4489651 | CSCC-31-T | [skin][head_neck][carcinoma][squamous_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3185 | ccattTTCTTCagtg | AGAAGAAG | m6b | Disrupted | HHKTA_38545_NM_153371|634|673|1.99032528838083|0.172057747027166 |
hsa-miR-4724-5p | ccattttGTTCAGTg | AACUGAAC | m7b | Created | HHKTA_38545_NM_153371|634|673|1.99032528838083|0.172057747027166 |
hsa-miR-3185 | ccattTTCTTCagtg | AGAAGAAG | m6b | Disrupted | HPKTA_17181_G18541.1_28155484 |
hsa-miR-4724-5p | ccattttGTTCAGTg | AACUGAAC | m7b | Created | HPKTA_17181_G18541.1_28155484 |
hsa-miR-3185 | ccattTTCTTCagtg | AGAAGAAG | m6b | Disrupted | HPRO6_23075_G27024.1_28155484 |
hsa-miR-4724-5p | ccattttGTTCAGTg | AACUGAAC | m7b | Created | HPRO6_23075_G27024.1_28155484 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr13:g.27581351C>T | COSM4489858 | CSCC-44-T | [skin][head_neck][carcinoma][squamous_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-186-5p | ttTTCTTTagtgtgc | CAAAGAAU | m6b | Created | HHKTA_38545_NM_153371|634|673|1.99032528838083|0.172057747027166 |
hsa-miR-3185 | ttTTCTTCagtgtgc | AGAAGAAG | m6b | Disrupted | HHKTA_38545_NM_153371|634|673|1.99032528838083|0.172057747027166 |
hsa-miR-4744 | tttTCTTTAGtgtgc | UCUAAAGA | m7b | Created | HHKTA_38545_NM_153371|634|673|1.99032528838083|0.172057747027166 |
hsa-miR-186-5p | ttTTCTTTagtgtgc | CAAAGAAU | m6b | Created | HPKTA_17181_G18541.1_28155484 |
hsa-miR-3185 | ttTTCTTCagtgtgc | AGAAGAAG | m6b | Disrupted | HPKTA_17181_G18541.1_28155484 |
hsa-miR-4744 | tttTCTTTAGtgtgc | UCUAAAGA | m7b | Created | HPKTA_17181_G18541.1_28155484 |
hsa-miR-186-5p | ttTTCTTTagtgtgc | CAAAGAAU | m6b | Created | HPRO6_23075_G27024.1_28155484 |
hsa-miR-3185 | ttTTCTTCagtgtgc | AGAAGAAG | m6b | Disrupted | HPRO6_23075_G27024.1_28155484 |
hsa-miR-4744 | tttTCTTTAGtgtgc | UCUAAAGA | m7b | Created | HPRO6_23075_G27024.1_28155484 |