SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_006769
Gene Symbol: LMO4
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.87340187A>G COSM2244668 HCT116 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-199a-3p atccACTACTGccag ACAGUAGU m7b Disrupted HHFKP_11085_cluster-498_8_20
hsa-miR-199b-3p atccACTACTGccag ACAGUAGU m7b Disrupted HHFKP_11085_cluster-498_8_20
hsa-miR-3129-5p atccACTACTGCcag GCAGUAGU m8a Disrupted HHFKP_11085_cluster-498_8_20
hsa-miR-4519 atcCACTGCTGccag CAGCAGUG m8a Created HHFKP_11085_cluster-498_8_20
hsa-miR-885-3p atccactGCTGCCag AGGCAGCG m6b Created HHFKP_11085_cluster-498_8_20
hsa-miR-199a-3p atccACTACTGccag ACAGUAGU m7b Disrupted HPKTA_1412_G1520.1_87805858
hsa-miR-199b-3p atccACTACTGccag ACAGUAGU m7b Disrupted HPKTA_1412_G1520.1_87805858
hsa-miR-3129-5p atccACTACTGCcag GCAGUAGU m8a Disrupted HPKTA_1412_G1520.1_87805858
hsa-miR-4519 atcCACTGCTGccag CAGCAGUG m8a Created HPKTA_1412_G1520.1_87805858
hsa-miR-885-3p atccactGCTGCCag AGGCAGCG m6b Created HPKTA_1412_G1520.1_87805858
hsa-miR-199a-3p atccACTACTGccag ACAGUAGU m7b Disrupted HPRO6_1980_G2323.2_87805882
hsa-miR-199b-3p atccACTACTGccag ACAGUAGU m7b Disrupted HPRO6_1980_G2323.2_87805882
hsa-miR-3129-5p atccACTACTGCcag GCAGUAGU m8a Disrupted HPRO6_1980_G2323.2_87805882
hsa-miR-4519 atcCACTGCTGccag CAGCAGUG m8a Created HPRO6_1980_G2323.2_87805882
hsa-miR-885-3p atccactGCTGCCag AGGCAGCG m6b Created HPRO6_1980_G2323.2_87805882
hsa-miR-199a-3p atccACTACTGccag ACAGUAGU m7b Disrupted HPTK1_732_G879.2_87805879
hsa-miR-199b-3p atccACTACTGccag ACAGUAGU m7b Disrupted HPTK1_732_G879.2_87805879
hsa-miR-3129-5p atccACTACTGCcag GCAGUAGU m8a Disrupted HPTK1_732_G879.2_87805879
hsa-miR-4519 atcCACTGCTGccag CAGCAGUG m8a Created HPTK1_732_G879.2_87805879
hsa-miR-885-3p atccactGCTGCCag AGGCAGCG m6b Created HPTK1_732_G879.2_87805879

Mutation Mutation ID Sample Name Cancer Type
chr1:g.87340176A>T COSM4801246 CHC2351T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-146a-3p acTTCAGAGcaatcc CCUCUGAA m7b (m7b->m6b) HHFCT_11385_cluster-498_11_21
hsa-miR-25-3p acttcaGTGCAATcc CAUUGCAC m7b Created HHFCT_11385_cluster-498_11_21
hsa-miR-301a-5p actTCAGAGCaatcc GCUCUGAC m7a Disrupted HHFCT_11385_cluster-498_11_21
hsa-miR-301b-5p actTCAGAGCaatcc GCUCUGAC m7a Disrupted HHFCT_11385_cluster-498_11_21
hsa-miR-3194-3p acttCAGAGCaatcc AGCUCUGC m6b Disrupted HHFCT_11385_cluster-498_11_21
hsa-miR-32-5p acttcaGTGCAATcc UAUUGCAC m7b Created HHFCT_11385_cluster-498_11_21
hsa-miR-363-3p acttcaGTGCAATcc AAUUGCAC m7b Created HHFCT_11385_cluster-498_11_21
hsa-miR-367-3p acttcaGTGCAATcc AAUUGCAC m7b Created HHFCT_11385_cluster-498_11_21
hsa-miR-5691 acttCAGAGCAAtcc UUGCUCUG m8a Disrupted HHFCT_11385_cluster-498_11_21
hsa-miR-6805-3p acttCAGAGCAAtcc UUGCUCUG m8a Disrupted HHFCT_11385_cluster-498_11_21
hsa-miR-92a-3p acttcaGTGCAATcc UAUUGCAC m7b Created HHFCT_11385_cluster-498_11_21
hsa-miR-92b-3p acttcaGTGCAATcc UAUUGCAC m7b Created HHFCT_11385_cluster-498_11_21
hsa-miR-146a-3p acTTCAGAGcaatcc CCUCUGAA m7b (m7b->m6b) HHFKP_11085_cluster-498_8_20
hsa-miR-25-3p acttcaGTGCAATcc CAUUGCAC m7b Created HHFKP_11085_cluster-498_8_20
hsa-miR-301a-5p actTCAGAGCaatcc GCUCUGAC m7a Disrupted HHFKP_11085_cluster-498_8_20
hsa-miR-301b-5p actTCAGAGCaatcc GCUCUGAC m7a Disrupted HHFKP_11085_cluster-498_8_20
hsa-miR-3194-3p acttCAGAGCaatcc AGCUCUGC m6b Disrupted HHFKP_11085_cluster-498_8_20
hsa-miR-32-5p acttcaGTGCAATcc UAUUGCAC m7b Created HHFKP_11085_cluster-498_8_20
hsa-miR-363-3p acttcaGTGCAATcc AAUUGCAC m7b Created HHFKP_11085_cluster-498_8_20
hsa-miR-367-3p acttcaGTGCAATcc AAUUGCAC m7b Created HHFKP_11085_cluster-498_8_20
hsa-miR-5691 acttCAGAGCAAtcc UUGCUCUG m8a Disrupted HHFKP_11085_cluster-498_8_20
hsa-miR-6805-3p acttCAGAGCAAtcc UUGCUCUG m8a Disrupted HHFKP_11085_cluster-498_8_20
hsa-miR-92a-3p acttcaGTGCAATcc UAUUGCAC m7b Created HHFKP_11085_cluster-498_8_20
hsa-miR-92b-3p acttcaGTGCAATcc UAUUGCAC m7b Created HHFKP_11085_cluster-498_8_20
hsa-miR-146a-3p acTTCAGAGcaatcc CCUCUGAA m7b (m7b->m6b) HPKTA_1412_G1520.1_87805858
hsa-miR-25-3p acttcaGTGCAATcc CAUUGCAC m7b Created HPKTA_1412_G1520.1_87805858
hsa-miR-301a-5p actTCAGAGCaatcc GCUCUGAC m7a Disrupted HPKTA_1412_G1520.1_87805858
hsa-miR-301b-5p actTCAGAGCaatcc GCUCUGAC m7a Disrupted HPKTA_1412_G1520.1_87805858
hsa-miR-3194-3p acttCAGAGCaatcc AGCUCUGC m6b Disrupted HPKTA_1412_G1520.1_87805858
hsa-miR-32-5p acttcaGTGCAATcc UAUUGCAC m7b Created HPKTA_1412_G1520.1_87805858
hsa-miR-363-3p acttcaGTGCAATcc AAUUGCAC m7b Created HPKTA_1412_G1520.1_87805858
hsa-miR-367-3p acttcaGTGCAATcc AAUUGCAC m7b Created HPKTA_1412_G1520.1_87805858
hsa-miR-5691 acttCAGAGCAAtcc UUGCUCUG m8a Disrupted HPKTA_1412_G1520.1_87805858
hsa-miR-6805-3p acttCAGAGCAAtcc UUGCUCUG m8a Disrupted HPKTA_1412_G1520.1_87805858
hsa-miR-92a-3p acttcaGTGCAATcc UAUUGCAC m7b Created HPKTA_1412_G1520.1_87805858
hsa-miR-92b-3p acttcaGTGCAATcc UAUUGCAC m7b Created HPKTA_1412_G1520.1_87805858
hsa-miR-146a-3p acTTCAGAGcaatcc CCUCUGAA m7b (m7b->m6b) HPRO6_1980_G2323.2_87805882
hsa-miR-25-3p acttcaGTGCAATcc CAUUGCAC m7b Created HPRO6_1980_G2323.2_87805882
hsa-miR-301a-5p actTCAGAGCaatcc GCUCUGAC m7a Disrupted HPRO6_1980_G2323.2_87805882
hsa-miR-301b-5p actTCAGAGCaatcc GCUCUGAC m7a Disrupted HPRO6_1980_G2323.2_87805882
hsa-miR-3194-3p acttCAGAGCaatcc AGCUCUGC m6b Disrupted HPRO6_1980_G2323.2_87805882
hsa-miR-32-5p acttcaGTGCAATcc UAUUGCAC m7b Created HPRO6_1980_G2323.2_87805882
hsa-miR-363-3p acttcaGTGCAATcc AAUUGCAC m7b Created HPRO6_1980_G2323.2_87805882
hsa-miR-367-3p acttcaGTGCAATcc AAUUGCAC m7b Created HPRO6_1980_G2323.2_87805882
hsa-miR-5691 acttCAGAGCAAtcc UUGCUCUG m8a Disrupted HPRO6_1980_G2323.2_87805882
hsa-miR-6805-3p acttCAGAGCAAtcc UUGCUCUG m8a Disrupted HPRO6_1980_G2323.2_87805882
hsa-miR-92a-3p acttcaGTGCAATcc UAUUGCAC m7b Created HPRO6_1980_G2323.2_87805882
hsa-miR-92b-3p acttcaGTGCAATcc UAUUGCAC m7b Created HPRO6_1980_G2323.2_87805882

Mutation Mutation ID Sample Name Cancer Type
chr1:g.87340150T>C COSM1503988 TCGA-78-7147-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7855-5p gctCTCACCAAtggc UUGGUGAG m8a Created HHKTA_21414_NM_006769|1199|1238|3.41816734308881|0.605711685085788
hsa-miR-4710 gctCTCACCaatggc GGGUGAGG m6b Created HPCB1_737_G968.1_87805858
hsa-miR-4712-3p gCTCTCATcaatggc AAUGAGAG m7b Disrupted HPCB1_737_G968.1_87805858
hsa-miR-4792 gctCTCACCaatggc CGGUGAGC m6b Created HPCB1_737_G968.1_87805858
hsa-miR-7855-5p gctCTCACCAAtggc UUGGUGAG m8a Created HPCB1_737_G968.1_87805858
hsa-miR-4710 gctCTCACCaatggc GGGUGAGG m6b Created HPCB3_468_G654.1_87805843
hsa-miR-4712-3p gCTCTCATcaatggc AAUGAGAG m7b Disrupted HPCB3_468_G654.1_87805843
hsa-miR-4792 gctCTCACCaatggc CGGUGAGC m6b Created HPCB3_468_G654.1_87805843
hsa-miR-7855-5p gctCTCACCAAtggc UUGGUGAG m8a Created HPCB3_468_G654.1_87805843
hsa-miR-4710 gctCTCACCaatggc GGGUGAGG m6b Created HPKTA_1412_G1520.1_87805858
hsa-miR-4712-3p gCTCTCATcaatggc AAUGAGAG m7b Disrupted HPKTA_1412_G1520.1_87805858
hsa-miR-4792 gctCTCACCaatggc CGGUGAGC m6b Created HPKTA_1412_G1520.1_87805858
hsa-miR-7855-5p gctCTCACCAAtggc UUGGUGAG m8a Created HPKTA_1412_G1520.1_87805858
hsa-miR-4710 gctCTCACCaatggc GGGUGAGG m6b Created HPTK1_731_G879.1_87805828
hsa-miR-4712-3p gCTCTCATcaatggc AAUGAGAG m7b Disrupted HPTK1_731_G879.1_87805828
hsa-miR-4792 gctCTCACCaatggc CGGUGAGC m6b Created HPTK1_731_G879.1_87805828
hsa-miR-7855-5p gctCTCACCAAtggc UUGGUGAG m8a Created HPTK1_731_G879.1_87805828
hsa-miR-4710 gctCTCACCaatggc GGGUGAGG m6b Created HHFKP_11085_cluster-498_8_20
hsa-miR-4712-3p gCTCTCATcaatggc AAUGAGAG m7b Disrupted HHFKP_11085_cluster-498_8_20
hsa-miR-4792 gctCTCACCaatggc CGGUGAGC m6b Created HHFKP_11085_cluster-498_8_20
hsa-miR-7855-5p gctCTCACCAAtggc UUGGUGAG m8a Created HHFKP_11085_cluster-498_8_20
hsa-miR-4710 gctCTCACCaatggc GGGUGAGG m6b Created HHKTA_21414_NM_006769|1199|1238|3.41816734308881|0.605711685085788
hsa-miR-4712-3p gCTCTCATcaatggc AAUGAGAG m7b Disrupted HHKTA_21414_NM_006769|1199|1238|3.41816734308881|0.605711685085788
hsa-miR-4792 gctCTCACCaatggc CGGUGAGC m6b Created HHKTA_21414_NM_006769|1199|1238|3.41816734308881|0.605711685085788

Mutation Mutation ID Sample Name Cancer Type
chr1:g.87340136A>G COSM465044 TCGA-CJ-5684-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3142 atgatAGGCCTacag AAGGCCUU m6b Created HHFCT_11384_cluster-498_10_29
hsa-miR-3927-5p aTGATAGGCctacag GCCUAUCA m8a (m7a->m8a) HHFCT_11384_cluster-498_10_29
hsa-miR-3142 atgatAGGCCTacag AAGGCCUU m6b Created HHFKP_11085_cluster-498_8_20
hsa-miR-3927-5p aTGATAGGCctacag GCCUAUCA m8a (m7a->m8a) HHFKP_11085_cluster-498_8_20
hsa-miR-3142 atgatAGGCCTacag AAGGCCUU m6b Created HHKTA_21414_NM_006769|1199|1238|3.41816734308881|0.605711685085788
hsa-miR-3927-5p aTGATAGGCctacag GCCUAUCA m8a (m7a->m8a) HHKTA_21414_NM_006769|1199|1238|3.41816734308881|0.605711685085788

Mutation Mutation ID Sample Name Cancer Type
chr1:g.87340115T>C COSM4698242 T3202 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-22-3p atGGCAGCTTatttt AAGCUGCC m8a Created HHFCT_11384_cluster-498_10_29
hsa-miR-320e atggCAGCTTatttt AAAGCUGG m6b Created HHFCT_11384_cluster-498_10_29
hsa-miR-548av-3p atgGCAGTTTatttt AAAACUGC m7b Disrupted HHFCT_11384_cluster-498_10_29
hsa-miR-548g-3p atggCAGTTTatttt AAAACUGU m6b Disrupted HHFCT_11384_cluster-498_10_29
hsa-miR-22-3p atGGCAGCTTatttt AAGCUGCC m8a Created HHRBC_533_BC3-2of3-SCL_7883
hsa-miR-320e atggCAGCTTatttt AAAGCUGG m6b Created HHRBC_533_BC3-2of3-SCL_7883
hsa-miR-548av-3p atgGCAGTTTatttt AAAACUGC m7b Disrupted HHRBC_533_BC3-2of3-SCL_7883
hsa-miR-548g-3p atggCAGTTTatttt AAAACUGU m6b Disrupted HHRBC_533_BC3-2of3-SCL_7883
hsa-miR-22-3p atGGCAGCTTatttt AAGCUGCC m8a Created HHRBL_550_BCBL1-2of3-SCL_774
hsa-miR-320e atggCAGCTTatttt AAAGCUGG m6b Created HHRBL_550_BCBL1-2of3-SCL_774
hsa-miR-548av-3p atgGCAGTTTatttt AAAACUGC m7b Disrupted HHRBL_550_BCBL1-2of3-SCL_774
hsa-miR-548g-3p atggCAGTTTatttt AAAACUGU m6b Disrupted HHRBL_550_BCBL1-2of3-SCL_774
hsa-miR-22-3p atGGCAGCTTatttt AAGCUGCC m8a Created HPKTA_1411_G1519.1_87805792
hsa-miR-320e atggCAGCTTatttt AAAGCUGG m6b Created HPKTA_1411_G1519.1_87805792
hsa-miR-548av-3p atgGCAGTTTatttt AAAACUGC m7b Disrupted HPKTA_1411_G1519.1_87805792
hsa-miR-548g-3p atggCAGTTTatttt AAAACUGU m6b Disrupted HPKTA_1411_G1519.1_87805792
hsa-miR-22-3p atGGCAGCTTatttt AAGCUGCC m8a Created HPRO6_1978_G2322.1_87805792
hsa-miR-320e atggCAGCTTatttt AAAGCUGG m6b Created HPRO6_1978_G2322.1_87805792
hsa-miR-548av-3p atgGCAGTTTatttt AAAACUGC m7b Disrupted HPRO6_1978_G2322.1_87805792
hsa-miR-548g-3p atggCAGTTTatttt AAAACUGU m6b Disrupted HPRO6_1978_G2322.1_87805792
hsa-miR-22-3p atGGCAGCTTatttt AAGCUGCC m8a Created HPRO8_393_G538.1_87805792
hsa-miR-320e atggCAGCTTatttt AAAGCUGG m6b Created HPRO8_393_G538.1_87805792
hsa-miR-548av-3p atgGCAGTTTatttt AAAACUGC m7b Disrupted HPRO8_393_G538.1_87805792
hsa-miR-548g-3p atggCAGTTTatttt AAAACUGU m6b Disrupted HPRO8_393_G538.1_87805792
hsa-miR-22-3p atGGCAGCTTatttt AAGCUGCC m8a Created HPTA3_511_G804.1_87805792
hsa-miR-320e atggCAGCTTatttt AAAGCUGG m6b Created HPTA3_511_G804.1_87805792
hsa-miR-548av-3p atgGCAGTTTatttt AAAACUGC m7b Disrupted HPTA3_511_G804.1_87805792
hsa-miR-548g-3p atggCAGTTTatttt AAAACUGU m6b Disrupted HPTA3_511_G804.1_87805792

Mutation Mutation ID Sample Name Cancer Type
chr1:g.87340098C>T COSM1688001 YUBOO [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1537-3p tCGGTTTTactacat AAAACCGU m7a Created HHFCT_11383_cluster-498_9_28
hsa-miR-3606-5p tcggtTTCACTAcat UUAGUGAA m7b Disrupted HHFCT_11383_cluster-498_9_28
hsa-miR-548aa tcGGTTTTactacat AAAAACCA m6b Created HHFCT_11383_cluster-498_9_28
hsa-miR-548ap-3p tcGGTTTTactacat AAAAACCA m6b Created HHFCT_11383_cluster-498_9_28
hsa-miR-548at-3p tCGGTTTTactacat CAAAACCG m7b Created HHFCT_11383_cluster-498_9_28
hsa-miR-548ay-3p tCGGTTTTactacat CAAAACCG m7b Created HHFCT_11383_cluster-498_9_28
hsa-miR-548t-3p tcGGTTTTactacat AAAAACCA m6b Created HHFCT_11383_cluster-498_9_28
hsa-miR-6073 tcggttTCACTACat GGUAGUGA m7b Disrupted HHFCT_11383_cluster-498_9_28
hsa-miR-1537-3p tCGGTTTTactacat AAAACCGU m7a Created HHFKP_11084_cluster-498_6_39
hsa-miR-3606-5p tcggtTTCACTAcat UUAGUGAA m7b Disrupted HHFKP_11084_cluster-498_6_39
hsa-miR-548aa tcGGTTTTactacat AAAAACCA m6b Created HHFKP_11084_cluster-498_6_39
hsa-miR-548ap-3p tcGGTTTTactacat AAAAACCA m6b Created HHFKP_11084_cluster-498_6_39
hsa-miR-548at-3p tCGGTTTTactacat CAAAACCG m7b Created HHFKP_11084_cluster-498_6_39
hsa-miR-548ay-3p tCGGTTTTactacat CAAAACCG m7b Created HHFKP_11084_cluster-498_6_39
hsa-miR-548t-3p tcGGTTTTactacat AAAAACCA m6b Created HHFKP_11084_cluster-498_6_39
hsa-miR-6073 tcggttTCACTACat GGUAGUGA m7b Disrupted HHFKP_11084_cluster-498_6_39
hsa-miR-1537-3p tCGGTTTTactacat AAAACCGU m7a Created HHRBC_533_BC3-2of3-SCL_7883
hsa-miR-3606-5p tcggtTTCACTAcat UUAGUGAA m7b Disrupted HHRBC_533_BC3-2of3-SCL_7883
hsa-miR-548aa tcGGTTTTactacat AAAAACCA m6b Created HHRBC_533_BC3-2of3-SCL_7883
hsa-miR-548ap-3p tcGGTTTTactacat AAAAACCA m6b Created HHRBC_533_BC3-2of3-SCL_7883
hsa-miR-548at-3p tCGGTTTTactacat CAAAACCG m7b Created HHRBC_533_BC3-2of3-SCL_7883
hsa-miR-548ay-3p tCGGTTTTactacat CAAAACCG m7b Created HHRBC_533_BC3-2of3-SCL_7883
hsa-miR-548t-3p tcGGTTTTactacat AAAAACCA m6b Created HHRBC_533_BC3-2of3-SCL_7883
hsa-miR-6073 tcggttTCACTACat GGUAGUGA m7b Disrupted HHRBC_533_BC3-2of3-SCL_7883
hsa-miR-1537-3p tCGGTTTTactacat AAAACCGU m7a Created HHRBL_550_BCBL1-2of3-SCL_774
hsa-miR-3606-5p tcggtTTCACTAcat UUAGUGAA m7b Disrupted HHRBL_550_BCBL1-2of3-SCL_774
hsa-miR-548aa tcGGTTTTactacat AAAAACCA m6b Created HHRBL_550_BCBL1-2of3-SCL_774
hsa-miR-548ap-3p tcGGTTTTactacat AAAAACCA m6b Created HHRBL_550_BCBL1-2of3-SCL_774
hsa-miR-548at-3p tCGGTTTTactacat CAAAACCG m7b Created HHRBL_550_BCBL1-2of3-SCL_774
hsa-miR-548ay-3p tCGGTTTTactacat CAAAACCG m7b Created HHRBL_550_BCBL1-2of3-SCL_774
hsa-miR-548t-3p tcGGTTTTactacat AAAAACCA m6b Created HHRBL_550_BCBL1-2of3-SCL_774
hsa-miR-6073 tcggttTCACTACat GGUAGUGA m7b Disrupted HHRBL_550_BCBL1-2of3-SCL_774
hsa-miR-1537-3p tCGGTTTTactacat AAAACCGU m7a Created HPKTA_1411_G1519.1_87805792
hsa-miR-3606-5p tcggtTTCACTAcat UUAGUGAA m7b Disrupted HPKTA_1411_G1519.1_87805792
hsa-miR-548aa tcGGTTTTactacat AAAAACCA m6b Created HPKTA_1411_G1519.1_87805792
hsa-miR-548ap-3p tcGGTTTTactacat AAAAACCA m6b Created HPKTA_1411_G1519.1_87805792
hsa-miR-548at-3p tCGGTTTTactacat CAAAACCG m7b Created HPKTA_1411_G1519.1_87805792
hsa-miR-548ay-3p tCGGTTTTactacat CAAAACCG m7b Created HPKTA_1411_G1519.1_87805792
hsa-miR-548t-3p tcGGTTTTactacat AAAAACCA m6b Created HPKTA_1411_G1519.1_87805792
hsa-miR-6073 tcggttTCACTACat GGUAGUGA m7b Disrupted HPKTA_1411_G1519.1_87805792
hsa-miR-1537-3p tCGGTTTTactacat AAAACCGU m7a Created HPRO6_1978_G2322.1_87805792
hsa-miR-3606-5p tcggtTTCACTAcat UUAGUGAA m7b Disrupted HPRO6_1978_G2322.1_87805792
hsa-miR-548aa tcGGTTTTactacat AAAAACCA m6b Created HPRO6_1978_G2322.1_87805792
hsa-miR-548ap-3p tcGGTTTTactacat AAAAACCA m6b Created HPRO6_1978_G2322.1_87805792
hsa-miR-548at-3p tCGGTTTTactacat CAAAACCG m7b Created HPRO6_1978_G2322.1_87805792
hsa-miR-548ay-3p tCGGTTTTactacat CAAAACCG m7b Created HPRO6_1978_G2322.1_87805792
hsa-miR-548t-3p tcGGTTTTactacat AAAAACCA m6b Created HPRO6_1978_G2322.1_87805792
hsa-miR-6073 tcggttTCACTACat GGUAGUGA m7b Disrupted HPRO6_1978_G2322.1_87805792
hsa-miR-1537-3p tCGGTTTTactacat AAAACCGU m7a Created HPRO8_393_G538.1_87805792
hsa-miR-3606-5p tcggtTTCACTAcat UUAGUGAA m7b Disrupted HPRO8_393_G538.1_87805792
hsa-miR-548aa tcGGTTTTactacat AAAAACCA m6b Created HPRO8_393_G538.1_87805792
hsa-miR-548ap-3p tcGGTTTTactacat AAAAACCA m6b Created HPRO8_393_G538.1_87805792
hsa-miR-548at-3p tCGGTTTTactacat CAAAACCG m7b Created HPRO8_393_G538.1_87805792
hsa-miR-548ay-3p tCGGTTTTactacat CAAAACCG m7b Created HPRO8_393_G538.1_87805792
hsa-miR-548t-3p tcGGTTTTactacat AAAAACCA m6b Created HPRO8_393_G538.1_87805792
hsa-miR-6073 tcggttTCACTACat GGUAGUGA m7b Disrupted HPRO8_393_G538.1_87805792
hsa-miR-1537-3p tCGGTTTTactacat AAAACCGU m7a Created HPTA3_511_G804.1_87805792
hsa-miR-3606-5p tcggtTTCACTAcat UUAGUGAA m7b Disrupted HPTA3_511_G804.1_87805792
hsa-miR-548aa tcGGTTTTactacat AAAAACCA m6b Created HPTA3_511_G804.1_87805792
hsa-miR-548ap-3p tcGGTTTTactacat AAAAACCA m6b Created HPTA3_511_G804.1_87805792
hsa-miR-548at-3p tCGGTTTTactacat CAAAACCG m7b Created HPTA3_511_G804.1_87805792
hsa-miR-548ay-3p tCGGTTTTactacat CAAAACCG m7b Created HPTA3_511_G804.1_87805792
hsa-miR-548t-3p tcGGTTTTactacat AAAAACCA m6b Created HPTA3_511_G804.1_87805792
hsa-miR-6073 tcggttTCACTACat GGUAGUGA m7b Disrupted HPTA3_511_G804.1_87805792
Mutation Mutation ID Sample Name Cancer Type
chr1:g.87340092C>T COSM912863 TCGA-AP-A0LM-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr1:g.87340087G>T COSM3493107 TCGA-EE-A2GC-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1247-3p gTCCCGGGagatcgg CCCCGGGA m7b Disrupted HHFCT_11383_cluster-498_9_28

Mutation Mutation ID Sample Name Cancer Type
chr1:g.87340086G>T COSM331202 LUAD-B00416 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1247-3p ggTCCCGGGagatcg CCCCGGGA m7b (m7b->m6b) HHRBL_550_BCBL1-2of3-SCL_774
hsa-miR-1285-5p ggtcccGTGAGATCg GAUCUCAC m8a Created HHRBL_550_BCBL1-2of3-SCL_774
hsa-miR-4532 ggtCCCGGGagatcg CCCCGGGG m6b Disrupted HHRBL_550_BCBL1-2of3-SCL_774
hsa-miR-4695-3p ggtcccgTGAGATCg UGAUCUCA m7b Created HHRBL_550_BCBL1-2of3-SCL_774
hsa-miR-1247-3p ggTCCCGGGagatcg CCCCGGGA m7b (m7b->m6b) HHFCT_11383_cluster-498_9_28
hsa-miR-1285-5p ggtcccGTGAGATCg GAUCUCAC m8a Created HHFCT_11383_cluster-498_9_28
hsa-miR-4532 ggtCCCGGGagatcg CCCCGGGG m6b Disrupted HHFCT_11383_cluster-498_9_28
hsa-miR-4695-3p ggtcccgTGAGATCg UGAUCUCA m7b Created HHFCT_11383_cluster-498_9_28
hsa-miR-1247-3p ggTCCCGGGagatcg CCCCGGGA m7b (m7b->m6b) HHFKP_11084_cluster-498_6_39
hsa-miR-1285-5p ggtcccGTGAGATCg GAUCUCAC m8a Created HHFKP_11084_cluster-498_6_39
hsa-miR-4532 ggtCCCGGGagatcg CCCCGGGG m6b Disrupted HHFKP_11084_cluster-498_6_39
hsa-miR-4695-3p ggtcccgTGAGATCg UGAUCUCA m7b Created HHFKP_11084_cluster-498_6_39

Mutation Mutation ID Sample Name Cancer Type
chr1:g.87340084C>T COSM426783 TCGA-BH-A0E9-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1247-3p ctggTCCCGGGagat CCCCGGGA m7b Disrupted HHFCT_11383_cluster-498_9_28
hsa-miR-1915-3p ctggtCCTGGGagat CCCCAGGG m6b Created HHFCT_11383_cluster-498_9_28
hsa-miR-2116-3p ctggtccTGGGAGat CCUCCCAU m6b Created HHFCT_11383_cluster-498_9_28
hsa-miR-4532 ctggtCCCGGGagat CCCCGGGG m6b Disrupted HHFCT_11383_cluster-498_9_28
hsa-miR-4713-5p ctggtccTGGGAGAt UUCUCCCA m7b Created HHFCT_11383_cluster-498_9_28
hsa-miR-4726-3p ctggtCCTGGGagat ACCCAGGU m6b Created HHFCT_11383_cluster-498_9_28
hsa-miR-532-3p ctggtccTGGGAGat CCUCCCAC m6b Created HHFCT_11383_cluster-498_9_28
hsa-miR-6840-3p ctggTCCTGGGagat GCCCAGGA m7b Created HHFCT_11383_cluster-498_9_28
hsa-miR-1247-3p ctggTCCCGGGagat CCCCGGGA m7b Disrupted HHFKP_11084_cluster-498_6_39
hsa-miR-1915-3p ctggtCCTGGGagat CCCCAGGG m6b Created HHFKP_11084_cluster-498_6_39
hsa-miR-2116-3p ctggtccTGGGAGat CCUCCCAU m6b Created HHFKP_11084_cluster-498_6_39
hsa-miR-4532 ctggtCCCGGGagat CCCCGGGG m6b Disrupted HHFKP_11084_cluster-498_6_39
hsa-miR-4713-5p ctggtccTGGGAGAt UUCUCCCA m7b Created HHFKP_11084_cluster-498_6_39
hsa-miR-4726-3p ctggtCCTGGGagat ACCCAGGU m6b Created HHFKP_11084_cluster-498_6_39
hsa-miR-532-3p ctggtccTGGGAGat CCUCCCAC m6b Created HHFKP_11084_cluster-498_6_39
hsa-miR-6840-3p ctggTCCTGGGagat GCCCAGGA m7b Created HHFKP_11084_cluster-498_6_39
hsa-miR-1247-3p ctggTCCCGGGagat CCCCGGGA m7b Disrupted HHRBL_550_BCBL1-2of3-SCL_774
hsa-miR-1915-3p ctggtCCTGGGagat CCCCAGGG m6b Created HHRBL_550_BCBL1-2of3-SCL_774
hsa-miR-2116-3p ctggtccTGGGAGat CCUCCCAU m6b Created HHRBL_550_BCBL1-2of3-SCL_774
hsa-miR-4532 ctggtCCCGGGagat CCCCGGGG m6b Disrupted HHRBL_550_BCBL1-2of3-SCL_774
hsa-miR-4713-5p ctggtccTGGGAGAt UUCUCCCA m7b Created HHRBL_550_BCBL1-2of3-SCL_774
hsa-miR-4726-3p ctggtCCTGGGagat ACCCAGGU m6b Created HHRBL_550_BCBL1-2of3-SCL_774
hsa-miR-532-3p ctggtccTGGGAGat CCUCCCAC m6b Created HHRBL_550_BCBL1-2of3-SCL_774
hsa-miR-6840-3p ctggTCCTGGGagat GCCCAGGA m7b Created HHRBL_550_BCBL1-2of3-SCL_774

Mutation Mutation ID Sample Name Cancer Type
chr1:g.87340068C>T COSM1256546 ESO-2536 [oesophagus][lower_third][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1180-3p tacctGCCGGAAtcg UUUCCGGC m7b Disrupted HHFCT_11383_cluster-498_9_28
hsa-miR-214-3p taCCTGCTGgaatcg ACAGCAGG m7b (m6b->m7b) HHFCT_11383_cluster-498_9_28
hsa-miR-338-3p taccTGCTGGAatcg UCCAGCAU m7a Created HHFCT_11383_cluster-498_9_28
hsa-miR-3619-5p taCCTGCTGgaatcg UCAGCAGG m7b (m6b->m7b) HHFCT_11383_cluster-498_9_28
hsa-miR-4530 tacCTGCTGGaatcg CCCAGCAG m7b Created HHFCT_11383_cluster-498_9_28
hsa-miR-761 taCCTGCTGgaatcg GCAGCAGG m7b (m6b->m7b) HHFCT_11383_cluster-498_9_28
hsa-miR-1180-3p tacctGCCGGAAtcg UUUCCGGC m7b Disrupted HHFKP_11084_cluster-498_6_39
hsa-miR-214-3p taCCTGCTGgaatcg ACAGCAGG m7b (m6b->m7b) HHFKP_11084_cluster-498_6_39
hsa-miR-338-3p taccTGCTGGAatcg UCCAGCAU m7a Created HHFKP_11084_cluster-498_6_39
hsa-miR-3619-5p taCCTGCTGgaatcg UCAGCAGG m7b (m6b->m7b) HHFKP_11084_cluster-498_6_39
hsa-miR-4530 tacCTGCTGGaatcg CCCAGCAG m7b Created HHFKP_11084_cluster-498_6_39
hsa-miR-761 taCCTGCTGgaatcg GCAGCAGG m7b (m6b->m7b) HHFKP_11084_cluster-498_6_39
hsa-miR-1180-3p tacctGCCGGAAtcg UUUCCGGC m7b Disrupted HHRBL_550_BCBL1-2of3-SCL_774
hsa-miR-214-3p taCCTGCTGgaatcg ACAGCAGG m7b (m6b->m7b) HHRBL_550_BCBL1-2of3-SCL_774
hsa-miR-338-3p taccTGCTGGAatcg UCCAGCAU m7a Created HHRBL_550_BCBL1-2of3-SCL_774
hsa-miR-3619-5p taCCTGCTGgaatcg UCAGCAGG m7b (m6b->m7b) HHRBL_550_BCBL1-2of3-SCL_774
hsa-miR-4530 tacCTGCTGGaatcg CCCAGCAG m7b Created HHRBL_550_BCBL1-2of3-SCL_774
hsa-miR-761 taCCTGCTGgaatcg GCAGCAGG m7b (m6b->m7b) HHRBL_550_BCBL1-2of3-SCL_774

Mutation Mutation ID Sample Name Cancer Type
chr1:g.87340060C>T COSM3790314 TCGA-G2-A3VY-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2278 acaTGCTCTacctgc GAGAGCAG m6b Disrupted HHFCT_11383_cluster-498_9_28
hsa-miR-3927-3p acatgcTCTACCTGc CAGGUAGA m8a Disrupted HHFCT_11383_cluster-498_9_28
hsa-miR-4422 acATGCTTTacctgc AAAAGCAU m7b (m6b->m7b) HHFCT_11383_cluster-498_9_28
hsa-miR-4451 acatgCTCTACCtgc UGGUAGAG m7b Disrupted HHFCT_11383_cluster-498_9_28
hsa-miR-4732-5p acatGCTCTACctgc UGUAGAGC m7b Disrupted HHFCT_11383_cluster-498_9_28
hsa-miR-6831-5p acatgcTCTACCTgc UAGGUAGA m7b Disrupted HHFCT_11383_cluster-498_9_28
hsa-miR-6835-3p acaTGCTTTacctgc AAAAGCAC m6b Created HHFCT_11383_cluster-498_9_28
hsa-miR-2278 acaTGCTCTacctgc GAGAGCAG m6b Disrupted HHFKP_11084_cluster-498_6_39
hsa-miR-3927-3p acatgcTCTACCTGc CAGGUAGA m8a Disrupted HHFKP_11084_cluster-498_6_39
hsa-miR-4422 acATGCTTTacctgc AAAAGCAU m7b (m6b->m7b) HHFKP_11084_cluster-498_6_39
hsa-miR-4451 acatgCTCTACCtgc UGGUAGAG m7b Disrupted HHFKP_11084_cluster-498_6_39
hsa-miR-4732-5p acatGCTCTACctgc UGUAGAGC m7b Disrupted HHFKP_11084_cluster-498_6_39
hsa-miR-6831-5p acatgcTCTACCTgc UAGGUAGA m7b Disrupted HHFKP_11084_cluster-498_6_39
hsa-miR-6835-3p acaTGCTTTacctgc AAAAGCAC m6b Created HHFKP_11084_cluster-498_6_39
hsa-miR-2278 acaTGCTCTacctgc GAGAGCAG m6b Disrupted HHRBL_550_BCBL1-2of3-SCL_774
hsa-miR-3927-3p acatgcTCTACCTGc CAGGUAGA m8a Disrupted HHRBL_550_BCBL1-2of3-SCL_774
hsa-miR-4422 acATGCTTTacctgc AAAAGCAU m7b (m6b->m7b) HHRBL_550_BCBL1-2of3-SCL_774
hsa-miR-4451 acatgCTCTACCtgc UGGUAGAG m7b Disrupted HHRBL_550_BCBL1-2of3-SCL_774
hsa-miR-4732-5p acatGCTCTACctgc UGUAGAGC m7b Disrupted HHRBL_550_BCBL1-2of3-SCL_774
hsa-miR-6831-5p acatgcTCTACCTgc UAGGUAGA m7b Disrupted HHRBL_550_BCBL1-2of3-SCL_774
hsa-miR-6835-3p acaTGCTTTacctgc AAAAGCAC m6b Created HHRBL_550_BCBL1-2of3-SCL_774
Mutation Mutation ID Sample Name Cancer Type
chr1:g.87339552G>T COSM2244660 TCGA-G3-A25Z-01 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr1:g.87332229C>T COSM4402385 TCGA-D9-A6EC-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1468-3p catgatcTTTTGCag AGCAAAAU m6b Created HHFCT_11380_cluster-498_6_22
hsa-miR-518a-5p catgatcCTTTGCAg CUGCAAAG m7b Disrupted HHFCT_11380_cluster-498_6_22
hsa-miR-527 catgatcCTTTGCAg CUGCAAAG m7b Disrupted HHFCT_11380_cluster-498_6_22
hsa-miR-548aj-5p catgatCTTTTGCAg UGCAAAAG m8a Created HHFCT_11380_cluster-498_6_22
hsa-miR-548aw catgatcTTTTGCAg GUGCAAAA m7b Created HHFCT_11380_cluster-498_6_22
hsa-miR-548f-5p catgatCTTTTGCAg UGCAAAAG m8a Created HHFCT_11380_cluster-498_6_22
hsa-miR-548g-5p catgatCTTTTGCAg UGCAAAAG m8a Created HHFCT_11380_cluster-498_6_22
hsa-miR-548x-5p catgatCTTTTGCAg UGCAAAAG m8a Created HHFCT_11380_cluster-498_6_22
hsa-miR-5694 cATGATCTtttgcag CAGAUCAU m7b Created HHFCT_11380_cluster-498_6_22

Mutation Mutation ID Sample Name Cancer Type
chr1:g.87332211A>T COSM4956744 CHC2112T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-194-5p CTGTTACAccaaaag UGUAACAG m8a Disrupted HHFCT_11380_cluster-498_6_22
hsa-miR-3198 ctgttACTCCAaaag GUGGAGUC m6b Created HHFCT_11380_cluster-498_6_22
hsa-miR-4309 ctgttACTCCAaaag CUGGAGUC m6b Created HHFCT_11380_cluster-498_6_22
hsa-miR-7850-5p ctgttacTCCAAAag GUUUGGAC m6b Created HHFCT_11380_cluster-498_6_22
hsa-miR-802 cTGTTACTccaaaag CAGUAACA m7b Created HHFCT_11380_cluster-498_6_22
hsa-miR-194-5p CTGTTACAccaaaag UGUAACAG m8a Disrupted HPRO6_1977_G2321.1_87797883
hsa-miR-3198 ctgttACTCCAaaag GUGGAGUC m6b Created HPRO6_1977_G2321.1_87797883
hsa-miR-4309 ctgttACTCCAaaag CUGGAGUC m6b Created HPRO6_1977_G2321.1_87797883
hsa-miR-7850-5p ctgttacTCCAAAag GUUUGGAC m6b Created HPRO6_1977_G2321.1_87797883
hsa-miR-802 cTGTTACTccaaaag CAGUAACA m7b Created HPRO6_1977_G2321.1_87797883
Mutation Mutation ID Sample Name Cancer Type
chr1:g.87332195C>A COSM1503990 TCGA-44-2656-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr1:g.87331355G>T COSN4753247 tumor_4175837 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1262 acacactTCACCCAc AUGGGUGA m7b Created HHFCT_11379_cluster-498_5_35
hsa-miR-143-5p acacACTGCACCcac GGUGCAGU m8a Disrupted HHFCT_11379_cluster-498_5_35
hsa-miR-3616-5p acaCACTTCAcccac AUGAAGUG m7b Created HHFCT_11379_cluster-498_5_35
hsa-miR-4302 aCACACTGcacccac CCAGUGUG m7b Disrupted HHFCT_11379_cluster-498_5_35
hsa-miR-4701-3p acacactTCACCCAc AUGGGUGA m7b Created HHFCT_11379_cluster-498_5_35
hsa-miR-4795-5p acaCACTTCacccac AGAAGUGG m6b Created HHFCT_11379_cluster-498_5_35
hsa-miR-573 acaCACTTCAcccac CUGAAGUG m7b Created HHFCT_11379_cluster-498_5_35
hsa-miR-595 aCACACTTCacccac GAAGUGUG m8a (m7a->m8a) HHFCT_11379_cluster-498_5_35
hsa-miR-6499-3p acACACTGCacccac AGCAGUGU m7b (m7b->m6b) HHFCT_11379_cluster-498_5_35
hsa-miR-6736-5p acacactTCACCCAc CUGGGUGA m7b Created HHFCT_11379_cluster-498_5_35
hsa-miR-6741-5p acacactGCACCCAc GUGGGUGC m7b Disrupted HHFCT_11379_cluster-498_5_35

Mutation Mutation ID Sample Name Cancer Type
chr1:g.87328836C>T COSN1109595 HCC77T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-296-5p gGGGGCCCccgggcg AGGGCCCC m7b Disrupted HHHNA_1248_LMO4|NM_006769|exon_utr5|-5.1389257873759|-0.741193876052149
hsa-miR-4532 gggggcCCCCGGGcg CCCCGGGG m7b Disrupted HHHNA_1248_LMO4|NM_006769|exon_utr5|-5.1389257873759|-0.741193876052149
hsa-miR-5008-5p ggGGGCCTCcgggcg UGAGGCCC m7b (m6b->m7b) HHHNA_1248_LMO4|NM_006769|exon_utr5|-5.1389257873759|-0.741193876052149
hsa-miR-296-5p gGGGGCCCccgggcg AGGGCCCC m7b Disrupted HHHSA_1248_LMO4|NM_006769|exon_utr5|-5.1389257873759|-0.741193876052149
hsa-miR-4532 gggggcCCCCGGGcg CCCCGGGG m7b Disrupted HHHSA_1248_LMO4|NM_006769|exon_utr5|-5.1389257873759|-0.741193876052149
hsa-miR-5008-5p ggGGGCCTCcgggcg UGAGGCCC m7b (m6b->m7b) HHHSA_1248_LMO4|NM_006769|exon_utr5|-5.1389257873759|-0.741193876052149

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser