SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0069429
Gene Symbol: KLF3
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr4:g.38689804GG>G COSM1741863 251 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][diffuse_large_B_cell_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3191-5p ccaCAGAGAcagatt CUCUCUGG m6b Created HHFKP_109555_cluster-17090_5_57
hsa-miR-3909 ccacAGAGGACAgatt UGUCCUCU m8a Disrupted HHFKP_109555_cluster-17090_5_57
hsa-miR-593-3p ccaCAGAGACAgatt UGUCUCUG m8a Created HHFKP_109555_cluster-17090_5_57
hsa-miR-676-3p ccacagAGGACAGatt CUGUCCUA m7a Disrupted HHFKP_109555_cluster-17090_5_57
hsa-miR-6780a-3p ccaCAGAGGAcagatt CUCCUCUG m7b Disrupted HHFKP_109555_cluster-17090_5_57
hsa-miR-6818-3p ccacAGAGACAgatt UUGUCUCU m7b Created HHFKP_109555_cluster-17090_5_57
hsa-miR-6852-3p ccacAGAGGACAgatt UGUCCUCU m8a Disrupted HHFKP_109555_cluster-17090_5_57
hsa-miR-6888-3p ccacagAGACAGATt AUCUGUCU m8a Created HHFKP_109555_cluster-17090_5_57
hsa-miR-6895-3p ccacAGAGACAgatt UGUCUCUC m7a Created HHFKP_109555_cluster-17090_5_57

Mutation Mutation ID Sample Name Cancer Type
chr4:g.38689804G>T COSM1055099 TCGA-D1-A0ZO-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-215-3p ccacagATGACAGAt UCUGUCAU m8a Created HHFKP_109555_cluster-17090_5_57
hsa-miR-3909 ccacAGAGGACAgat UGUCCUCU m8a Disrupted HHFKP_109555_cluster-17090_5_57
hsa-miR-452-3p ccaCAGATGAcagat CUCAUCUG m7b Created HHFKP_109555_cluster-17090_5_57
hsa-miR-676-3p ccacagAGGACAGat CUGUCCUA m7a Disrupted HHFKP_109555_cluster-17090_5_57
hsa-miR-6773-3p ccacagaTGACAGat ACUGUCAC m6b Created HHFKP_109555_cluster-17090_5_57
hsa-miR-6780a-3p ccaCAGAGGAcagat CUCCUCUG m7b Disrupted HHFKP_109555_cluster-17090_5_57
hsa-miR-6852-3p ccacAGAGGACAgat UGUCCUCU m8a Disrupted HHFKP_109555_cluster-17090_5_57

Mutation Mutation ID Sample Name Cancer Type
chr4:g.38689798C>T COSM71357 TCGA-25-2392-01 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1273g-5p atcgAACCACagagg GGUGGUUG m6b Disrupted HHFKP_109555_cluster-17090_5_57
hsa-miR-134-3p atcgaaCCACAGagg CCUGUGGG m6b Disrupted HHFKP_109555_cluster-17090_5_57
hsa-miR-203a-5p atcGAACCACagagg AGUGGUUC m7b Disrupted HHFKP_109555_cluster-17090_5_57
hsa-miR-20b-3p atcgaACTACAGagg ACUGUAGU m7b Created HHFKP_109555_cluster-17090_5_57

Mutation Mutation ID Sample Name Cancer Type
chr4:g.38688944G>T COSM587253 TCGA-55-1595-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1247-3p ggagCCCGGGGatcc CCCCGGGA m7a Disrupted HPRO6_56871_G67760.1_38690561
hsa-miR-1915-3p ggagCCCTGGGatcc CCCCAGGG m7b Created HPRO6_56871_G67760.1_38690561
hsa-miR-4532 ggagCCCGGGGatcc CCCCGGGG m7a Disrupted HPRO6_56871_G67760.1_38690561
hsa-miR-4685-5p ggaGCCCTGGGatcc CCCAGGGC m8a Created HPRO6_56871_G67760.1_38690561
hsa-miR-4707-5p ggagcCCGGGGatcc GCCCCGGC m6b Disrupted HPRO6_56871_G67760.1_38690561
hsa-miR-4726-3p ggagcCCTGGGatcc ACCCAGGU m6b Created HPRO6_56871_G67760.1_38690561
hsa-miR-5088-5p gGAGCCCTGggatcc CAGGGCUC m8a (m7a->m8a) HPRO6_56871_G67760.1_38690561
hsa-miR-5587-3p ggagCCCGGGGatcc GCCCCGGG m7b Disrupted HPRO6_56871_G67760.1_38690561
hsa-miR-6763-3p ggagcCCGGGGAtcc CUCCCCGG m7b Disrupted HPRO6_56871_G67760.1_38690561
hsa-miR-6764-5p ggagCCCTGGGAtcc UCCCAGGG m8a Created HPRO6_56871_G67760.1_38690561
hsa-miR-6837-5p ggaGCCCTGGgatcc ACCAGGGC m7b Created HPRO6_56871_G67760.1_38690561
hsa-miR-6840-3p ggagcCCTGGGatcc GCCCAGGA m6b Created HPRO6_56871_G67760.1_38690561

Mutation Mutation ID Sample Name Cancer Type
chr4:g.38688943C>T COSM1212589 ESO-717 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1247-3p cggagCCCGGGGatc CCCCGGGA m7a Disrupted HPRO6_56871_G67760.1_38690561
hsa-miR-1915-3p cggagCCTGGGGatc CCCCAGGG m7a Created HPRO6_56871_G67760.1_38690561
hsa-miR-2355-5p cggagcCTGGGGATc AUCCCCAG m8a Created HPRO6_56871_G67760.1_38690561
hsa-miR-3155a cgGAGCCTGGggatc CCAGGCUC m8a Created HPRO6_56871_G67760.1_38690561
hsa-miR-3155b cgGAGCCTGGggatc CCAGGCUC m8a Created HPRO6_56871_G67760.1_38690561
hsa-miR-4532 cggagCCCGGGGatc CCCCGGGG m7a Disrupted HPRO6_56871_G67760.1_38690561
hsa-miR-4707-5p cggagcCCGGGGatc GCCCCGGC m6b Disrupted HPRO6_56871_G67760.1_38690561
hsa-miR-484 cgGAGCCTGgggatc UCAGGCUC m7b (m6b->m7b) HPRO6_56871_G67760.1_38690561
hsa-miR-5587-3p cggagCCCGGGGatc GCCCCGGG m7b Disrupted HPRO6_56871_G67760.1_38690561
hsa-miR-6763-3p cggagcCCGGGGAtc CUCCCCGG m7b Disrupted HPRO6_56871_G67760.1_38690561

Mutation Mutation ID Sample Name Cancer Type
chr4:g.38688924C>T COSM4124519 TCGA-BR-8682-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3648 cctctCGCGGCatgg AGCCGCGG m6b Disrupted HPRO6_56871_G67760.1_38690561
hsa-miR-6869-3p cctctCGCGGCatgg CGCCGCGC m6b Disrupted HPRO6_56871_G67760.1_38690561

Mutation Mutation ID Sample Name Cancer Type
chr4:g.38688894A>G COSM2846245 RMS88_ [soft_tissue][striated_muscle][rhabdomyosarcoma][embryonal]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3622b-5p gctgtCCATGCCacc AGGCAUGG m7b Disrupted HHFCT_118477_cluster-17090_1_129
hsa-miR-564 gctgtCCGTGCCacc AGGCACGG m7b Created HHFCT_118477_cluster-17090_1_129
hsa-miR-891a-3p gctgtccGTGCCACc AGUGGCAC m7b Created HHFCT_118477_cluster-17090_1_129

Mutation Mutation ID Sample Name Cancer Type
chr4:g.38688893C>T COSM3603497 TCGA-EB-A24D-01 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3622b-5p cgctgtCCATGCCac AGGCAUGG m7b Disrupted HHFCT_118477_cluster-17090_1_129
hsa-miR-4520-3p cgCTGTCCAtgccac UUGGACAG m7b (m7b->m6b) HHFCT_118477_cluster-17090_1_129
hsa-miR-4524b-3p cgCTGTCTatgccac GAGACAGG m6b Created HHFCT_118477_cluster-17090_1_129

Mutation Mutation ID Sample Name Cancer Type
chr4:g.38688887G>A COSM2846244 TCGA-ER-A19Q-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2277-3p gcgtgcCGCTGTCca UGACAGCG m7b Disrupted HHFCT_118477_cluster-17090_1_129
hsa-miR-5693 gcgtGCCACTGtcca GCAGUGGC m7b Created HHFCT_118477_cluster-17090_1_129
hsa-miR-891a-3p gcGTGCCACTgtcca AGUGGCAC m8a Created HHFCT_118477_cluster-17090_1_129
Mutation Mutation ID Sample Name Cancer Type
chr4:g.38688881C>T COSM4821421 TCGA-C5-A7CJ-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr4:g.38688874C>A COSM1186549 LC_S51 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-302a-3p gtgcAGCACTTcggc UAAGUGCU m7b Created HHFCT_118477_cluster-17090_1_129
hsa-miR-302b-3p gtgcAGCACTTcggc UAAGUGCU m7b Created HHFCT_118477_cluster-17090_1_129
hsa-miR-302c-3p gtgcAGCACTTcggc UAAGUGCU m7b Created HHFCT_118477_cluster-17090_1_129
hsa-miR-302d-3p gtgcAGCACTTcggc UAAGUGCU m7b Created HHFCT_118477_cluster-17090_1_129
hsa-miR-302e gtgcAGCACTTcggc UAAGUGCU m7b Created HHFCT_118477_cluster-17090_1_129
hsa-miR-372-3p gtgcAGCACTTcggc AAAGUGCU m7b Created HHFCT_118477_cluster-17090_1_129
hsa-miR-373-3p gtgcAGCACTTCggc GAAGUGCU m8a Created HHFCT_118477_cluster-17090_1_129
hsa-miR-4446-3p gtgCAGCCCTtcggc CAGGGCUG m7b Disrupted HHFCT_118477_cluster-17090_1_129
hsa-miR-512-3p gtgCAGCACTTcggc AAGUGCUG m8a Created HHFCT_118477_cluster-17090_1_129
hsa-miR-520a-3p gtgcAGCACTTcggc AAAGUGCU m7b Created HHFCT_118477_cluster-17090_1_129
hsa-miR-520b gtgcAGCACTTcggc AAAGUGCU m7b Created HHFCT_118477_cluster-17090_1_129
hsa-miR-520c-3p gtgcAGCACTTcggc AAAGUGCU m7b Created HHFCT_118477_cluster-17090_1_129
hsa-miR-520d-3p gtgcAGCACTTcggc AAAGUGCU m7b Created HHFCT_118477_cluster-17090_1_129
hsa-miR-520e gtgcAGCACTTcggc AAAGUGCU m7b Created HHFCT_118477_cluster-17090_1_129
hsa-miR-6829-5p gtGCAGCCCttcggc UGGGCUGC m7b (m7b->m6b) HHFCT_118477_cluster-17090_1_129

Mutation Mutation ID Sample Name Cancer Type
chr4:g.38688861C>T COSM3603496 TCGA-FS-A1Z3-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1254 cccttcTCCAGGCgt AGCCUGGA m7b Disrupted HHFCT_118477_cluster-17090_1_129
hsa-miR-3116 cccttcTCCAGGCgt UGCCUGGA m7b Disrupted HHFCT_118477_cluster-17090_1_129
hsa-miR-3185 ccCTTCTTCaggcgt AGAAGAAG m7b (m6b->m7b) HHFCT_118477_cluster-17090_1_129
hsa-miR-4254 cccttCTCCAGGCgt GCCUGGAG m8a Disrupted HHFCT_118477_cluster-17090_1_129
hsa-miR-4434 ccCTTCTCCaggcgt AGGAGAAG m7b (m7b->m6b) HHFCT_118477_cluster-17090_1_129
hsa-miR-4516 ccCTTCTCCaggcgt GGGAGAAG m7b (m7b->m6b) HHFCT_118477_cluster-17090_1_129
hsa-miR-4531 cccTTCTCCAggcgt AUGGAGAA m7b Disrupted HHFCT_118477_cluster-17090_1_129
hsa-miR-5703 ccCTTCTCCaggcgt AGGAGAAG m7b (m7b->m6b) HHFCT_118477_cluster-17090_1_129
hsa-miR-6078 cccttctTCAGGCGt CCGCCUGA m7b Created HHFCT_118477_cluster-17090_1_129
hsa-miR-6770-5p cCCTTCTCcaggcgt UGAGAAGG m7b Disrupted HHFCT_118477_cluster-17090_1_129

Mutation Mutation ID Sample Name Cancer Type
chr4:g.38688761G>A COSM4124517 12-P279 [bone][NS][Ewings_sarcoma-peripheral_primitive_neuroectodermal_tumour][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4452 gGAATTCAccctcct UUGAAUUC m7b Created HPKTA_45239_G48734.1_38690368
hsa-miR-6804-5p ggaattCACCCTCct UGAGGGUG m7b Created HPKTA_45239_G48734.1_38690368
hsa-miR-4452 gGAATTCAccctcct UUGAAUUC m7b Created HPKTB_7669_G9772.1_38690368
hsa-miR-6804-5p ggaattCACCCTCct UGAGGGUG m7b Created HPKTB_7669_G9772.1_38690368

Mutation Mutation ID Sample Name Cancer Type
chr4:g.38688672A>G COSM4696369 T2940 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1227-5p ctttcaGGCCCCAga GUGGGGCC m7b Created HHFKP_109553_cluster-17090_3_139
hsa-miR-128-1-5p ctttcaGGCCCCaga CGGGGCCG m6b Created HHFKP_109553_cluster-17090_3_139
hsa-miR-128-2-5p ctttcaGGCCCCaga GGGGGCCG m6b Created HHFKP_109553_cluster-17090_3_139
hsa-miR-2861 ctttCAGGCCCCaga GGGGCCUG m8a Created HHFKP_109553_cluster-17090_3_139
hsa-miR-3170 ctttcagACCCCAGa CUGGGGUU m7a Disrupted HHFKP_109553_cluster-17090_3_139
hsa-miR-4766-5p CTTTCAGAccccaga UCUGAAAG m8a Disrupted HHFKP_109553_cluster-17090_3_139
hsa-miR-615-5p ctttcaGACCCCaga GGGGGUCC m6b Disrupted HHFKP_109553_cluster-17090_3_139
hsa-miR-6762-5p ctttcaGGCCCCaga CGGGGCCA m6b Created HHFKP_109553_cluster-17090_3_139
hsa-miR-6845-5p ctttcaGGCCCCaga CGGGGCCA m6b Created HHFKP_109553_cluster-17090_3_139
hsa-miR-7155-5p ctttcagACCCCAGa UCUGGGGU m7b Disrupted HHFKP_109553_cluster-17090_3_139
hsa-miR-7704 ctttcaGACCCCaga CGGGGUCG m6b Disrupted HHFKP_109553_cluster-17090_3_139

Mutation Mutation ID Sample Name Cancer Type
chr4:g.38688599T>G COSM481235 TCGA-BP-4782-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-374c-3p catCTAAGTacatgg CACUUAGC m6b Created HHFKP_109552_cluster-17090_2_43
hsa-miR-380-3p catctaATTACATgg UAUGUAAU m7b Disrupted HHFKP_109552_cluster-17090_2_43
hsa-miR-374c-3p catCTAAGTacatgg CACUUAGC m6b Created HPCB1_29078_G37107.1_38690221
hsa-miR-380-3p catctaATTACATgg UAUGUAAU m7b Disrupted HPCB1_29078_G37107.1_38690221

Mutation Mutation ID Sample Name Cancer Type
chr4:g.38680663C>T COSM3603495 TCGA-ER-A194-01 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2682-3p cAAGAGGCcatggac CGCCUCUU m7b Disrupted HHFKP_109551_cluster-17090_1_33
hsa-miR-4757-5p caAGAGGCCatggac AGGCCUCU m7b (m7b->m6b) HHFKP_109551_cluster-17090_1_33
hsa-miR-6744-3p caAGAGGCCatggac GGGCCUCU m7b (m7b->m6b) HHFKP_109551_cluster-17090_1_33
hsa-miR-6781-3p cAAGAGGCcatggac UGCCUCUU m7b Disrupted HHFKP_109551_cluster-17090_1_33
hsa-miR-6790-3p caaGAGGTCatggac CGACCUCG m6b Created HHFKP_109551_cluster-17090_1_33
hsa-miR-6821-3p caAGAGGTCAtggac UGACCUCU m8a Created HHFKP_109551_cluster-17090_1_33
hsa-miR-6878-3p caaGAGGCCAtggac CUGGCCUC m7b Disrupted HHFKP_109551_cluster-17090_1_33

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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