SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001093772
Gene Symbol: KIT
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr4:g.54740391A>G COSN229649
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3616-5p gCACTTCATtgagag AUGAAGUG m8a (m8a->m7a) HHKTA_16444_NM_000222|4816|4855|4.37006204622747|0.120988641640184

Mutation Mutation ID Sample Name Cancer Type
chr4:g.54739641A>G COSN229647
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4783-3p cctggaCACCGGGcc CCCCGGUG m7b Disrupted HHKTB_1701_NM_000222|4094|4133|47.2397875038331|0.120988641640184
hsa-miR-4783-3p cctggaCACCGGGcc CCCCGGUG m7b Disrupted HHKTB_1701_NM_000222|4094|4133|47.2397875038331|0.120988641640184

Mutation Mutation ID Sample Name Cancer Type
chr4:g.54739412G>T COSN2467437
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2053 acagttTTAACAaaa GUGUUAAU m6b Created HHKTA_46486_NM_000222|3856|3895|1.55764587786326|0.120988641640184
hsa-miR-375 acagtttGAACAAAa UUUGUUCG m7a Disrupted HHKTA_46486_NM_000222|3856|3895|1.55764587786326|0.120988641640184
hsa-miR-548a-3p aCAGTTTTaacaaaa CAAAACUG m7b Created HHKTA_46486_NM_000222|3856|3895|1.55764587786326|0.120988641640184
hsa-miR-548ar-3p aCAGTTTTAacaaaa UAAAACUG m8a (m7a->m8a) HHKTA_46486_NM_000222|3856|3895|1.55764587786326|0.120988641640184
hsa-miR-548av-3p aCAGTTTTaacaaaa AAAACUGC m7a Created HHKTA_46486_NM_000222|3856|3895|1.55764587786326|0.120988641640184
hsa-miR-548az-3p aCAGTTTTaacaaaa AAAAACUG m7b Created HHKTA_46486_NM_000222|3856|3895|1.55764587786326|0.120988641640184
hsa-miR-548e-3p aCAGTTTTaacaaaa AAAAACUG m7b Created HHKTA_46486_NM_000222|3856|3895|1.55764587786326|0.120988641640184
hsa-miR-548f-3p aCAGTTTTaacaaaa AAAAACUG m7b Created HHKTA_46486_NM_000222|3856|3895|1.55764587786326|0.120988641640184
hsa-miR-548g-3p ACAGTTTTaacaaaa AAAACUGU m8a Created HHKTA_46486_NM_000222|3856|3895|1.55764587786326|0.120988641640184
hsa-miR-5582-3p acAGTTTTAacaaaa UAAAACUU m7a (m6a->m7a) HHKTA_46486_NM_000222|3856|3895|1.55764587786326|0.120988641640184
hsa-miR-607 acagTTTGAACaaaa GUUCAAAU m7a Disrupted HHKTA_46486_NM_000222|3856|3895|1.55764587786326|0.120988641640184
hsa-miR-6715b-3p acaGTTTGAacaaaa CUCAAACC m6b Disrupted HHKTA_46486_NM_000222|3856|3895|1.55764587786326|0.120988641640184
hsa-miR-6739-3p acagtttGAACAAaa AUUGUUCU m6b Disrupted HHKTA_46486_NM_000222|3856|3895|1.55764587786326|0.120988641640184

Mutation Mutation ID Sample Name Cancer Type
chr4:g.54739408G>T COSN7640469 PCSI_0164_Pa_P_526 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4698 aagcaCATTTTGAac UCAAAAUG m8a Created HHKTA_46486_NM_000222|3856|3895|1.55764587786326|0.120988641640184
hsa-miR-5008-3p aAGCACAGtttgaac CCUGUGCU m7b Disrupted HHKTA_46486_NM_000222|3856|3895|1.55764587786326|0.120988641640184
hsa-miR-548g-3p aagcACAGTTTgaac AAAACUGU m7b Disrupted HHKTA_46486_NM_000222|3856|3895|1.55764587786326|0.120988641640184
hsa-miR-6715b-3p aagcacaGTTTGAac CUCAAACC m6b Disrupted HHKTA_46486_NM_000222|3856|3895|1.55764587786326|0.120988641640184
hsa-miR-6737-3p aAGCACAGtttgaac UCUGUGCU m7b Disrupted HHKTA_46486_NM_000222|3856|3895|1.55764587786326|0.120988641640184
hsa-miR-7157-3p aAGCACAGtttgaac UCUGUGCU m7b Disrupted HHKTA_46486_NM_000222|3856|3895|1.55764587786326|0.120988641640184
hsa-miR-8063 aagcacATTTTGAac UCAAAAUC m7a Created HHKTA_46486_NM_000222|3856|3895|1.55764587786326|0.120988641640184

Mutation Mutation ID Sample Name Cancer Type
chr4:g.54738754T>C COSN9792384 C0012T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-let-7f-2-3p ccaaCTGTATAtatt CUAUACAG m7b Disrupted HHKTA_28783_NM_000222|3185|3224|2.59607646310543|0.120988641640184
hsa-miR-1185-1-3p ccaaCTGTATATatt AUAUACAG m8a Disrupted HHKTA_28783_NM_000222|3185|3224|2.59607646310543|0.120988641640184
hsa-miR-1185-2-3p ccaaCTGTATATatt AUAUACAG m8a Disrupted HHKTA_28783_NM_000222|3185|3224|2.59607646310543|0.120988641640184
hsa-miR-5011-5p ccaactgTATATATt UAUAUAUA m7b Disrupted HHKTA_28783_NM_000222|3185|3224|2.59607646310543|0.120988641640184
hsa-miR-582-5p ccAACTGTAtatatt UUACAGUU m7b (m7b->m6b) HHKTA_28783_NM_000222|3185|3224|2.59607646310543|0.120988641640184
hsa-let-7f-2-3p ccaaCTGTATAtatt CUAUACAG m7b Disrupted HPSLC_14139_G16759.1_55604924
hsa-miR-1185-1-3p ccaaCTGTATATatt AUAUACAG m8a Disrupted HPSLC_14139_G16759.1_55604924
hsa-miR-1185-2-3p ccaaCTGTATATatt AUAUACAG m8a Disrupted HPSLC_14139_G16759.1_55604924
hsa-miR-5011-5p ccaactgTATATATt UAUAUAUA m7b Disrupted HPSLC_14139_G16759.1_55604924
hsa-miR-582-5p ccAACTGTAtatatt UUACAGUU m7b (m7b->m6b) HPSLC_14139_G16759.1_55604924

Mutation Mutation ID Sample Name Cancer Type
chr4:g.54738722C>T COSN6834893 RK119_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-425-5p tTGTCATTagccacc AAUGACAC m7a Created HPKTA_45390_G48909.1_55604904
hsa-miR-4502 ttgTCATCAGCcacc GCUGAUGA m8a Disrupted HPKTA_45390_G48909.1_55604904
hsa-miR-8075 ttgtCATCAGCcacc UGCUGAUG m7b Disrupted HPKTA_45390_G48909.1_55604904

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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