SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001168374
Gene Symbol: KIAA0319
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.24551505G>A COSM3623232 TCGA-EE-A29B-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7152-5p aaaatCAGGAAAaaa UUUCCUGU m7a Disrupted HHFKP_121987_cluster-19672_2_9
hsa-miR-1200 aaaaTCAGGAaaaaa CUCCUGAG m6b Disrupted HHFKP_121987_cluster-19672_2_9
hsa-miR-29a-5p aAAATCAGgaaaaaa ACUGAUUU m7b Disrupted HHFKP_121987_cluster-19672_2_9
hsa-miR-3074-5p aaaatCAGGAAaaaa GUUCCUGC m6b Disrupted HHFKP_121987_cluster-19672_2_9
hsa-miR-378a-5p aaaaTCAGGAaaaaa CUCCUGAC m6b Disrupted HHFKP_121987_cluster-19672_2_9
hsa-miR-526b-5p aaaaTCAAGAaaaaa CUCUUGAG m6b Created HHFKP_121987_cluster-19672_2_9
hsa-miR-578 aaaatCAAGAAaaaa CUUCUUGU m6b Created HHFKP_121987_cluster-19672_2_9

Mutation Mutation ID Sample Name Cancer Type
chr6:g.24551504G>A COSM3921156 TCGA-QB-A6FS-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4762-3p aaATCAGAAaaaaaa CUUCUGAU m7b (m6b->m7b) HHFKP_121987_cluster-19672_2_9
hsa-miR-1200 aaaTCAGGAaaaaaa CUCCUGAG m6b Disrupted HHFKP_121987_cluster-19672_2_9
hsa-miR-3074-5p aaatCAGGAAaaaaa GUUCCUGC m6b Disrupted HHFKP_121987_cluster-19672_2_9
hsa-miR-378a-5p aaaTCAGGAaaaaaa CUCCUGAC m6b Disrupted HHFKP_121987_cluster-19672_2_9
hsa-miR-7152-5p aaatCAGGAAAaaaa UUUCCUGU m7a Disrupted HHFKP_121987_cluster-19672_2_9

Mutation Mutation ID Sample Name Cancer Type
chr6:g.24551501A>G COSM4160416 PTC-28C [thyroid][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7152-5p tCAGGAAAaaaacaa UUUCCUGU m7a Disrupted HHFKP_121987_cluster-19672_2_9
hsa-miR-6875-3p tcaGGAAGAAaacaa AUUCUUCC m7b Created HHFKP_121987_cluster-19672_2_9
hsa-miR-4659b-3p tcagGAAGAAAacaa UUUCUUCU m7a Created HHFKP_121987_cluster-19672_2_9
hsa-miR-4659a-3p tcagGAAGAAAacaa UUUCUUCU m7a Created HHFKP_121987_cluster-19672_2_9

Mutation Mutation ID Sample Name Cancer Type
chr6:g.24551483C>T COSM3623231 TCGA-EE-A20C-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2392 acaCCATCCTggata UAGGAUGG m7b Disrupted HHFKP_121987_cluster-19672_2_9
hsa-miR-1193 acACCATCCtggata GGGAUGGU m7b (m7b->m6b) HHFKP_121987_cluster-19672_2_9
hsa-miR-4790-3p acACCATTCtggata UGAAUGGU m7b (m6b->m7b) HHFKP_121987_cluster-19672_2_9
hsa-miR-665 acaccaTCCTGGata ACCAGGAG m6b Disrupted HHFKP_121987_cluster-19672_2_9

Mutation Mutation ID Sample Name Cancer Type
chr6:g.24545420G>A COSN2157277 RK001_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6083 cccaaATATAAagtc CUUAUAUC m6b Created HHFCT_132538_cluster-19672_1_13

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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