SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0086334
Gene Symbol: KDM4C
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr9:g.6883748A>G COSN14995433 CHC433T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1271-5p gGTGCCAAtggggct CUUGGCAC m7b Disrupted HHFCT_160354_cluster-22658_19_8
hsa-miR-3189-5p ggtgccaATGGGGCt UGCCCCAU m7b Disrupted HHFCT_160354_cluster-22658_19_8
hsa-miR-4286 ggtgccAGTGGGGct ACCCCACU m7b Created HHFCT_160354_cluster-22658_19_8
hsa-miR-4758-3p ggtgccaGTGGGGCt UGCCCCAC m7b Created HHFCT_160354_cluster-22658_19_8
hsa-miR-96-5p gGTGCCAAtggggct UUUGGCAC m7b Disrupted HHFCT_160354_cluster-22658_19_8

Mutation Mutation ID Sample Name Cancer Type
chr9:g.6880058C>G COSM2777959 TCGA-AC-A23H-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3200-3p actagctCAAGGTaa CACCUUGC m6b Disrupted HHFCT_160352_cluster-22658_17_8
hsa-miR-4724-3p actagctGAAGGTAa GUACCUUC m7b Created HHFCT_160352_cluster-22658_17_8
hsa-miR-5690 acTAGCTGAaggtaa UCAGCUAC m7a (m6a->m7a) HHFCT_160352_cluster-22658_17_8
hsa-miR-610 acTAGCTCAaggtaa UGAGCUAA m7a (m7a->m6a) HHFCT_160352_cluster-22658_17_8
hsa-miR-6813-3p actagctCAAGGTaa AACCUUGG m6b Disrupted HHFCT_160352_cluster-22658_17_8
hsa-miR-3200-3p actagctCAAGGTaa CACCUUGC m6b Disrupted HHFCT_160352_cluster-22658_17_8
hsa-miR-4724-3p actagctGAAGGTAa GUACCUUC m7b Created HHFCT_160352_cluster-22658_17_8
hsa-miR-5690 acTAGCTGAaggtaa UCAGCUAC m7a (m6a->m7a) HHFCT_160352_cluster-22658_17_8
hsa-miR-610 acTAGCTCAaggtaa UGAGCUAA m7a (m7a->m6a) HHFCT_160352_cluster-22658_17_8
hsa-miR-6813-3p actagctCAAGGTaa AACCUUGG m6b Disrupted HHFCT_160352_cluster-22658_17_8

Mutation Mutation ID Sample Name Cancer Type
chr9:g.6880055G>A COSM4588874 SJDES018-R [bone][NS][Ewings_sarcoma-peripheral_primitive_neuroectodermal_tumour][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4424 aagacTAACTCaagg AGAGUUAA m6b Created HHFCT_160352_cluster-22658_17_8
hsa-miR-610 aagacTAGCTCAagg UGAGCUAA m7a Disrupted HHFCT_160352_cluster-22658_17_8
hsa-miR-8086 aaGACTAGCtcaagg UGCUAGUC m7b (m7b->m6b) HHFCT_160352_cluster-22658_17_8
hsa-miR-4424 aagacTAACTCaagg AGAGUUAA m6b Created HHFCT_160352_cluster-22658_17_8
hsa-miR-610 aagacTAGCTCAagg UGAGCUAA m7a Disrupted HHFCT_160352_cluster-22658_17_8
hsa-miR-8086 aaGACTAGCtcaagg UGCUAGUC m7b (m7b->m6b) HHFCT_160352_cluster-22658_17_8

Mutation Mutation ID Sample Name Cancer Type
chr9:g.6880041G>A COSM173799 TCGA-AG-A002-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-382-5p ggaaaACAACTTgaa GAAGUUGU m7b Created HHFCT_160352_cluster-22658_17_8

Mutation Mutation ID Sample Name Cancer Type
chr9:g.6880040C>T COSM1211743 587336 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1250-3p tgGAAAATGacttga ACAUUUUC m7b (m6b->m7b) HHFCT_160352_cluster-22658_17_8
hsa-miR-224-5p tggaaaaTGACTTGa CAAGUCAC m7a Created HHFCT_160352_cluster-22658_17_8
hsa-miR-1250-3p tgGAAAATGacttga ACAUUUUC m7b (m6b->m7b) HHFCT_160352_cluster-22658_17_8
hsa-miR-224-5p tggaaaaTGACTTGa CAAGUCAC m7a Created HHFCT_160352_cluster-22658_17_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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