SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0086332
Gene Symbol: KDM4C
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr9:g.6849659C>T COSM4504039 CSCC-56-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-142-5p tggacCTTTATagca CAUAAAGU m6b Created HHRBC_13012_BC3-2of3-SCL_11470
hsa-miR-340-5p tggacCTTTATAgca UUAUAAAG m7b Created HHRBC_13012_BC3-2of3-SCL_11470
hsa-miR-3974 tgGACCTTTatagca AAAGGUCA m7a (m6a->m7a) HHRBC_13012_BC3-2of3-SCL_11470
hsa-miR-548m tggACCTTTatagca CAAAGGUA m6b Created HHRBC_13012_BC3-2of3-SCL_11470
hsa-miR-5590-3p tggacCTTTATagca AAUAAAGU m6b Created HHRBC_13012_BC3-2of3-SCL_11470
hsa-miR-142-5p tggacCTTTATagca CAUAAAGU m6b Created HPCB1_41099_G52436.1_6849662
hsa-miR-340-5p tggacCTTTATAgca UUAUAAAG m7b Created HPCB1_41099_G52436.1_6849662
hsa-miR-3974 tgGACCTTTatagca AAAGGUCA m7a (m6a->m7a) HPCB1_41099_G52436.1_6849662
hsa-miR-548m tggACCTTTatagca CAAAGGUA m6b Created HPCB1_41099_G52436.1_6849662
hsa-miR-5590-3p tggacCTTTATagca AAUAAAGU m6b Created HPCB1_41099_G52436.1_6849662
hsa-miR-142-5p tggacCTTTATagca CAUAAAGU m6b Created HPCB3_23811_G32653.1_6849662
hsa-miR-340-5p tggacCTTTATAgca UUAUAAAG m7b Created HPCB3_23811_G32653.1_6849662
hsa-miR-3974 tgGACCTTTatagca AAAGGUCA m7a (m6a->m7a) HPCB3_23811_G32653.1_6849662
hsa-miR-548m tggACCTTTatagca CAAAGGUA m6b Created HPCB3_23811_G32653.1_6849662
hsa-miR-5590-3p tggacCTTTATagca AAUAAAGU m6b Created HPCB3_23811_G32653.1_6849662
hsa-miR-142-5p tggacCTTTATagca CAUAAAGU m6b Created HPSD1_9442_G12387.1_6849662
hsa-miR-340-5p tggacCTTTATAgca UUAUAAAG m7b Created HPSD1_9442_G12387.1_6849662
hsa-miR-3974 tgGACCTTTatagca AAAGGUCA m7a (m6a->m7a) HPSD1_9442_G12387.1_6849662
hsa-miR-548m tggACCTTTatagca CAAAGGUA m6b Created HPSD1_9442_G12387.1_6849662
hsa-miR-5590-3p tggacCTTTATagca AAUAAAGU m6b Created HPSD1_9442_G12387.1_6849662
hsa-miR-142-5p tggacCTTTATagca CAUAAAGU m6b Created HPSD3_10121_G13720.1_6849639
hsa-miR-340-5p tggacCTTTATAgca UUAUAAAG m7b Created HPSD3_10121_G13720.1_6849639
hsa-miR-3974 tgGACCTTTatagca AAAGGUCA m7a (m6a->m7a) HPSD3_10121_G13720.1_6849639
hsa-miR-548m tggACCTTTatagca CAAAGGUA m6b Created HPSD3_10121_G13720.1_6849639
hsa-miR-5590-3p tggacCTTTATagca AAUAAAGU m6b Created HPSD3_10121_G13720.1_6849639
hsa-miR-142-5p tggacCTTTATagca CAUAAAGU m6b Created HPSEF_22737_G27514.1_6849639
hsa-miR-340-5p tggacCTTTATAgca UUAUAAAG m7b Created HPSEF_22737_G27514.1_6849639
hsa-miR-3974 tgGACCTTTatagca AAAGGUCA m7a (m6a->m7a) HPSEF_22737_G27514.1_6849639
hsa-miR-548m tggACCTTTatagca CAAAGGUA m6b Created HPSEF_22737_G27514.1_6849639
hsa-miR-5590-3p tggacCTTTATagca AAUAAAGU m6b Created HPSEF_22737_G27514.1_6849639
hsa-miR-142-5p tggacCTTTATagca CAUAAAGU m6b Created HPSLB_7431_G9064.1_6849662
hsa-miR-340-5p tggacCTTTATAgca UUAUAAAG m7b Created HPSLB_7431_G9064.1_6849662
hsa-miR-3974 tgGACCTTTatagca AAAGGUCA m7a (m6a->m7a) HPSLB_7431_G9064.1_6849662
hsa-miR-548m tggACCTTTatagca CAAAGGUA m6b Created HPSLB_7431_G9064.1_6849662
hsa-miR-5590-3p tggacCTTTATagca AAUAAAGU m6b Created HPSLB_7431_G9064.1_6849662
hsa-miR-142-5p tggacCTTTATagca CAUAAAGU m6b Created HPSLC_19667_G23435.1_6849662
hsa-miR-340-5p tggacCTTTATAgca UUAUAAAG m7b Created HPSLC_19667_G23435.1_6849662
hsa-miR-3974 tgGACCTTTatagca AAAGGUCA m7a (m6a->m7a) HPSLC_19667_G23435.1_6849662
hsa-miR-548m tggACCTTTatagca CAAAGGUA m6b Created HPSLC_19667_G23435.1_6849662
hsa-miR-5590-3p tggacCTTTATagca AAUAAAGU m6b Created HPSLC_19667_G23435.1_6849662
hsa-miR-142-5p tggacCTTTATagca CAUAAAGU m6b Created HHRBC_13012_BC3-2of3-SCL_11470
hsa-miR-340-5p tggacCTTTATAgca UUAUAAAG m7b Created HHRBC_13012_BC3-2of3-SCL_11470
hsa-miR-3974 tgGACCTTTatagca AAAGGUCA m7a (m6a->m7a) HHRBC_13012_BC3-2of3-SCL_11470
hsa-miR-548m tggACCTTTatagca CAAAGGUA m6b Created HHRBC_13012_BC3-2of3-SCL_11470
hsa-miR-5590-3p tggacCTTTATagca AAUAAAGU m6b Created HHRBC_13012_BC3-2of3-SCL_11470
hsa-miR-142-5p tggacCTTTATagca CAUAAAGU m6b Created HPCB1_41099_G52436.1_6849662
hsa-miR-340-5p tggacCTTTATAgca UUAUAAAG m7b Created HPCB1_41099_G52436.1_6849662
hsa-miR-3974 tgGACCTTTatagca AAAGGUCA m7a (m6a->m7a) HPCB1_41099_G52436.1_6849662
hsa-miR-548m tggACCTTTatagca CAAAGGUA m6b Created HPCB1_41099_G52436.1_6849662
hsa-miR-5590-3p tggacCTTTATagca AAUAAAGU m6b Created HPCB1_41099_G52436.1_6849662
hsa-miR-142-5p tggacCTTTATagca CAUAAAGU m6b Created HPCB3_23811_G32653.1_6849662
hsa-miR-340-5p tggacCTTTATAgca UUAUAAAG m7b Created HPCB3_23811_G32653.1_6849662
hsa-miR-3974 tgGACCTTTatagca AAAGGUCA m7a (m6a->m7a) HPCB3_23811_G32653.1_6849662
hsa-miR-548m tggACCTTTatagca CAAAGGUA m6b Created HPCB3_23811_G32653.1_6849662
hsa-miR-5590-3p tggacCTTTATagca AAUAAAGU m6b Created HPCB3_23811_G32653.1_6849662
hsa-miR-142-5p tggacCTTTATagca CAUAAAGU m6b Created HPSD1_9442_G12387.1_6849662
hsa-miR-340-5p tggacCTTTATAgca UUAUAAAG m7b Created HPSD1_9442_G12387.1_6849662
hsa-miR-3974 tgGACCTTTatagca AAAGGUCA m7a (m6a->m7a) HPSD1_9442_G12387.1_6849662
hsa-miR-548m tggACCTTTatagca CAAAGGUA m6b Created HPSD1_9442_G12387.1_6849662
hsa-miR-5590-3p tggacCTTTATagca AAUAAAGU m6b Created HPSD1_9442_G12387.1_6849662
hsa-miR-142-5p tggacCTTTATagca CAUAAAGU m6b Created HPSD3_10121_G13720.1_6849639
hsa-miR-340-5p tggacCTTTATAgca UUAUAAAG m7b Created HPSD3_10121_G13720.1_6849639
hsa-miR-3974 tgGACCTTTatagca AAAGGUCA m7a (m6a->m7a) HPSD3_10121_G13720.1_6849639
hsa-miR-548m tggACCTTTatagca CAAAGGUA m6b Created HPSD3_10121_G13720.1_6849639
hsa-miR-5590-3p tggacCTTTATagca AAUAAAGU m6b Created HPSD3_10121_G13720.1_6849639
hsa-miR-142-5p tggacCTTTATagca CAUAAAGU m6b Created HPSEF_22737_G27514.1_6849639
hsa-miR-340-5p tggacCTTTATAgca UUAUAAAG m7b Created HPSEF_22737_G27514.1_6849639
hsa-miR-3974 tgGACCTTTatagca AAAGGUCA m7a (m6a->m7a) HPSEF_22737_G27514.1_6849639
hsa-miR-548m tggACCTTTatagca CAAAGGUA m6b Created HPSEF_22737_G27514.1_6849639
hsa-miR-5590-3p tggacCTTTATagca AAUAAAGU m6b Created HPSEF_22737_G27514.1_6849639
hsa-miR-142-5p tggacCTTTATagca CAUAAAGU m6b Created HPSLB_7431_G9064.1_6849662
hsa-miR-340-5p tggacCTTTATAgca UUAUAAAG m7b Created HPSLB_7431_G9064.1_6849662
hsa-miR-3974 tgGACCTTTatagca AAAGGUCA m7a (m6a->m7a) HPSLB_7431_G9064.1_6849662
hsa-miR-548m tggACCTTTatagca CAAAGGUA m6b Created HPSLB_7431_G9064.1_6849662
hsa-miR-5590-3p tggacCTTTATagca AAUAAAGU m6b Created HPSLB_7431_G9064.1_6849662
hsa-miR-142-5p tggacCTTTATagca CAUAAAGU m6b Created HPSLC_19667_G23435.1_6849662
hsa-miR-340-5p tggacCTTTATAgca UUAUAAAG m7b Created HPSLC_19667_G23435.1_6849662
hsa-miR-3974 tgGACCTTTatagca AAAGGUCA m7a (m6a->m7a) HPSLC_19667_G23435.1_6849662
hsa-miR-548m tggACCTTTatagca CAAAGGUA m6b Created HPSLC_19667_G23435.1_6849662
hsa-miR-5590-3p tggacCTTTATagca AAUAAAGU m6b Created HPSLC_19667_G23435.1_6849662

Mutation Mutation ID Sample Name Cancer Type
chr9:g.6849645G>A COSM4694974 T578 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-511-5p gcacaccAAAGACAt GUGUCUUU m7b Created HPSD3_10121_G13720.1_6849639
hsa-miR-9-5p gcacACCAAAGAcat UCUUUGGU m8a Created HPSD3_10121_G13720.1_6849639
hsa-miR-511-5p gcacaccAAAGACAt GUGUCUUU m7b Created HPSEF_22737_G27514.1_6849639
hsa-miR-9-5p gcacACCAAAGAcat UCUUUGGU m8a Created HPSEF_22737_G27514.1_6849639
hsa-miR-511-5p gcacaccAAAGACAt GUGUCUUU m7b Created HPSD3_10121_G13720.1_6849639
hsa-miR-9-5p gcacACCAAAGAcat UCUUUGGU m8a Created HPSD3_10121_G13720.1_6849639
hsa-miR-511-5p gcacaccAAAGACAt GUGUCUUU m7b Created HPSEF_22737_G27514.1_6849639
hsa-miR-9-5p gcacACCAAAGAcat UCUUUGGU m8a Created HPSEF_22737_G27514.1_6849639

Mutation Mutation ID Sample Name Cancer Type
chr9:g.6849590A>T COSM1292860 CLL152 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][chronic_lymphocytic_leukaemia-small_lymphocytic_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4699-3p agggtGTAAATaccc AAUUUACU m6b Disrupted HPSEF_22736_G27513.1_6849598
hsa-miR-21-3p agGGTGTTaataccc CAACACCA m6b Created HPSEF_22736_G27513.1_6849598
hsa-miR-3591-3p agGGTGTTaataccc AAACACCA m6b Created HPSEF_22736_G27513.1_6849598
hsa-miR-4699-3p agggtGTAAATaccc AAUUUACU m6b Disrupted HPSEF_22736_G27513.1_6849598

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser