SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0086329
Gene Symbol: KDM4C
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr9:g.6835533G>T COSN1084869 TCGA-AP-A056-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-154-3p agcaggaGTATGATg AAUCAUAC m7b Disrupted HHRBC_13010_BC3-2of3-SCL_10959
hsa-miR-1-5p agcaggAGTATGatg ACAUACUU m6b Disrupted HHRBC_13010_BC3-2of3-SCL_10959
hsa-miR-487a-3p agcaggaGTATGATg AAUCAUAC m7b Disrupted HHRBC_13010_BC3-2of3-SCL_10959

Mutation Mutation ID Sample Name Cancer Type
chr9:g.6835411G>A COSN1084870 TCGA-AP-A051-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1268b cgccctgACGCCCag CGGGCGUG m6b Created HHRBL_14679_BCBL1-2of3-SCL_13060
hsa-miR-1268a cgccctgACGCCCag CGGGCGUG m6b Created HHRBL_14679_BCBL1-2of3-SCL_13060
hsa-miR-566 cgccctGGCGCCCag GGGCGCCU m7a Disrupted HHFKP_147932_cluster-22658_3_6
hsa-miR-3178 cgccctgGCGCCCag GGGGCGCG m6b Disrupted HHRBL_14679_BCBL1-2of3-SCL_13060
hsa-miR-566 cgccctGGCGCCCag GGGCGCCU m7a Disrupted HHRBL_14679_BCBL1-2of3-SCL_13060
hsa-miR-1268a cgccctgACGCCCag CGGGCGUG m6b Created HHFCT_160345_cluster-22658_10_10
hsa-miR-1268b cgccctgACGCCCag CGGGCGUG m6b Created HHFCT_160345_cluster-22658_10_10
hsa-miR-3178 cgccctgGCGCCCag GGGGCGCG m6b Disrupted HHFCT_160345_cluster-22658_10_10
hsa-miR-566 cgccctGGCGCCCag GGGCGCCU m7a Disrupted HHFCT_160345_cluster-22658_10_10
hsa-miR-3178 cgccctgGCGCCCag GGGGCGCG m6b Disrupted HHFKP_147932_cluster-22658_3_6
hsa-miR-1268b cgccctgACGCCCag CGGGCGUG m6b Created HHFKP_147932_cluster-22658_3_6
hsa-miR-1268a cgccctgACGCCCag CGGGCGUG m6b Created HHFKP_147932_cluster-22658_3_6

Mutation Mutation ID Sample Name Cancer Type
chr9:g.6815872T>A COSN14790552 CHC205T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3117-5p gtttctTAGTGTCTc AGACACUA m8a Created HHFCT_160339_cluster-22658_4_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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