SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0060474
Gene Symbol: JPH2
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr20:g.44186563T>C COSM1027043 TCGA-AP-A051-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4715-3p tttgaGGTGGCAggt GUGCCACC m7b Disrupted HHFKP_87544_cluster-14724_14_294
hsa-miR-4722-3p tttgaggTGGCAGGt ACCUGCCA m7b Disrupted HHFKP_87544_cluster-14724_14_294
hsa-miR-6727-3p tttgaggTGGCAGGt UCCUGCCA m7b Disrupted HHFKP_87544_cluster-14724_14_294
hsa-miR-4715-3p tttgaGGTGGCAggt GUGCCACC m7b Disrupted HHFKP_87544_cluster-14724_14_294
hsa-miR-4722-3p tttgaggTGGCAGGt ACCUGCCA m7b Disrupted HHFKP_87544_cluster-14724_14_294
hsa-miR-6727-3p tttgaggTGGCAGGt UCCUGCCA m7b Disrupted HHFKP_87544_cluster-14724_14_294

Mutation Mutation ID Sample Name Cancer Type
chr20:g.44186544G>A COSM3693516 TCGA-AZ-4615-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3934-5p ACACCTGAcccagcg UCAGGUGU m8a Created HHFKP_87544_cluster-14724_14_294
hsa-miR-4640-5p acacCTGGCCCAgcg UGGGCCAG m8a Disrupted HHFKP_87544_cluster-14724_14_294
hsa-miR-4726-5p acacCTGGCCCagcg AGGGCCAG m7b Disrupted HHFKP_87544_cluster-14724_14_294
hsa-miR-5589-5p acacctgACCCAGCg GGCUGGGU m7b Created HHFKP_87544_cluster-14724_14_294
hsa-miR-3934-5p ACACCTGAcccagcg UCAGGUGU m8a Created HHFKP_87544_cluster-14724_14_294
hsa-miR-4640-5p acacCTGGCCCAgcg UGGGCCAG m8a Disrupted HHFKP_87544_cluster-14724_14_294
hsa-miR-4726-5p acacCTGGCCCagcg AGGGCCAG m7b Disrupted HHFKP_87544_cluster-14724_14_294
hsa-miR-5589-5p acacctgACCCAGCg GGCUGGGU m7b Created HHFKP_87544_cluster-14724_14_294

Mutation Mutation ID Sample Name Cancer Type
chr20:g.44186538C>T COSM1411948 TCGA-DM-A0XD-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1273g-3p ggccCAGTGGaaaca ACCACUGC m6b Created HHFKP_87544_cluster-14724_14_294
hsa-miR-181a-2-3p ggccCAGTGGaaaca ACCACUGA m6b Created HHFKP_87544_cluster-14724_14_294
hsa-miR-3692-3p ggcccaGTGGAAaca GUUCCACA m6b Created HHFKP_87544_cluster-14724_14_294
hsa-miR-4436b-5p ggcccAGTGGAaaca GUCCACUU m6b Created HHFKP_87544_cluster-14724_14_294
hsa-miR-572 ggcccAGCGGAaaca GUCCGCUC m6b Disrupted HHFKP_87544_cluster-14724_14_294
hsa-miR-6509-3p ggccCAGTGGAAaca UUCCACUG m8a Created HHFKP_87544_cluster-14724_14_294
hsa-miR-718 ggcccaGCGGAAaca CUUCCGCC m6b Disrupted HHFKP_87544_cluster-14724_14_294
hsa-miR-1273g-3p ggccCAGTGGaaaca ACCACUGC m6b Created HHFKP_87544_cluster-14724_14_294
hsa-miR-181a-2-3p ggccCAGTGGaaaca ACCACUGA m6b Created HHFKP_87544_cluster-14724_14_294
hsa-miR-3692-3p ggcccaGTGGAAaca GUUCCACA m6b Created HHFKP_87544_cluster-14724_14_294
hsa-miR-4436b-5p ggcccAGTGGAaaca GUCCACUU m6b Created HHFKP_87544_cluster-14724_14_294
hsa-miR-572 ggcccAGCGGAaaca GUCCGCUC m6b Disrupted HHFKP_87544_cluster-14724_14_294
hsa-miR-6509-3p ggccCAGTGGAAaca UUCCACUG m8a Created HHFKP_87544_cluster-14724_14_294
hsa-miR-718 ggcccaGCGGAAaca CUUCCGCC m6b Disrupted HHFKP_87544_cluster-14724_14_294

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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