SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_175061
Gene Symbol: JAZF1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr7:g.28080898G>A COSN1348035 HCC111T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-616-3p ccCAATGACatgtgc AGUCAUUG m7b (m6b->m7b) HHFKP_130218_cluster-21308_53_22
Mutation Mutation ID Sample Name Cancer Type
chr7:g.28055609A>G COSN8299821 PCSI_0083_Pa_P_526 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr7:g.28024808G>T COSN9984356 AOCS-093-3-6 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1250-3p agGAAAATGTtctgt ACAUUUUC m8a Created HHFCT_142036_cluster-21308_30_108
hsa-miR-589-3p aggaaaaTGTTCTGt UCAGAACA m7b Created HHFCT_142036_cluster-21308_30_108
Mutation Mutation ID Sample Name Cancer Type
chr7:g.27967991C>T COSN9984346 AOCS-105-1-9 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr7:g.27895408C>T COSM4155712 C0048T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-215-3p ttcATGACAGAtgct UCUGUCAU m8a Disrupted HHFCT_142030_cluster-21308_24_38
hsa-miR-433-3p tTCATGATagatgct AUCAUGAU m7a Created HHFCT_142030_cluster-21308_24_38
hsa-miR-6773-3p ttcaTGACAGatgct ACUGUCAC m6b Disrupted HHFCT_142030_cluster-21308_24_38
hsa-miR-96-3p ttCATGATagatgct AAUCAUGU m6b Created HHFCT_142030_cluster-21308_24_38

Mutation Mutation ID Sample Name Cancer Type
chr7:g.27895391G>A COSM4535056 CSCC-10-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3160-5p ccgccGAAAGCagga GGCUUUCU m6b Created HHFCT_142030_cluster-21308_24_38
hsa-miR-3615 ccgCCGAGAGcagga UCUCUCGG m7b Disrupted HHFCT_142030_cluster-21308_24_38
hsa-miR-4638-5p ccGCCGAGagcagga ACUCGGCU m6b Disrupted HHFCT_142030_cluster-21308_24_38

Mutation Mutation ID Sample Name Cancer Type
chr7:g.27895377A>C COSM3832598 TCGA-AN-A046-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1226-5p agtCCCTCAagaaga GUGAGGGC m6b Created HHFCT_142030_cluster-21308_24_38
hsa-miR-2909 agtCCCTAAagaaga GUUAGGGC m6b Disrupted HHFCT_142030_cluster-21308_24_38
hsa-miR-3126-5p aGTCCCTCAagaaga UGAGGGAC m8a (m7a->m8a) HHFCT_142030_cluster-21308_24_38
hsa-miR-3162-5p agTCCCTAAagaaga UUAGGGAG m7a (m7a->m6a) HHFCT_142030_cluster-21308_24_38
hsa-miR-4419a agTCCCTCAagaaga UGAGGGAG m7a (m6a->m7a) HHFCT_142030_cluster-21308_24_38
hsa-miR-4510 agTCCCTCAagaaga UGAGGGAG m7a (m6a->m7a) HHFCT_142030_cluster-21308_24_38
hsa-miR-526b-5p agtccCTCAAGAaga CUCUUGAG m7b Created HHFCT_142030_cluster-21308_24_38
hsa-miR-578 agtccctCAAGAAGa CUUCUUGU m7a Created HHFCT_142030_cluster-21308_24_38
hsa-miR-6127 agTCCCTCAagaaga UGAGGGAG m7a (m6a->m7a) HHFCT_142030_cluster-21308_24_38
hsa-miR-6129 agTCCCTCAagaaga UGAGGGAG m7a (m6a->m7a) HHFCT_142030_cluster-21308_24_38
hsa-miR-6130 agTCCCTCAagaaga UGAGGGAG m7a (m6a->m7a) HHFCT_142030_cluster-21308_24_38
hsa-miR-6133 agTCCCTCAagaaga UGAGGGAG m7a (m6a->m7a) HHFCT_142030_cluster-21308_24_38
hsa-miR-6834-5p agTCCCTCAagaaga GUGAGGGA m7b (m6b->m7b) HHFCT_142030_cluster-21308_24_38
hsa-miR-6875-5p aGTCCCTCAagaaga UGAGGGAC m8a (m7a->m8a) HHFCT_142030_cluster-21308_24_38

Mutation Mutation ID Sample Name Cancer Type
chr7:g.27888206A>G COSN5655197 RK117_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-449c-3p ttttCTAGCAAattc UUGCUAGU m7a Created HHFKP_130198_cluster-21308_32_9

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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