SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0075678
Gene Symbol: JARID2
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr6:g.15511322A>G COSM4839643 TCGA-FU-A3HZ-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7156-5p gagGAGAACAAgctg UUGUUCUC m8a Disrupted HHFCT_137045_uc003nbj.1_68_8
hsa-miR-2117 gagGAGAACAagctg UGUUCUCU m7a Disrupted HHFCT_137045_uc003nbj.1_68_8
hsa-miR-4273 gagGAGAACAagctg GUGUUCUC m7b Disrupted HHFCT_137045_uc003nbj.1_68_8
hsa-miR-4279 GAGGAGAGcaagctg CUCUCCUC m8a Created HHFCT_137045_uc003nbj.1_68_8
hsa-miR-629-3p gaGGAGAACaagctg GUUCUCCC m7a (m7a->m6a) HHFCT_137045_uc003nbj.1_68_8
hsa-miR-6739-3p gaggAGAACAAgctg AUUGUUCU m7b Disrupted HHFCT_137045_uc003nbj.1_68_8
hsa-miR-6845-3p gAGGAGAGcaagctg CCUCUCCU m7b Created HHFCT_137045_uc003nbj.1_68_8

Mutation Mutation ID Sample Name Cancer Type
chr6:g.15511315G>A COSM3622182 TCGA-ER-A193-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5193 tgctGAGGAGGAgaa UCCUCCUC m8a Disrupted HHFCT_137045_uc003nbj.1_68_8
hsa-miR-4279 tgctgagGAGGAGAa CUCUCCUC m7b Disrupted HHFCT_137045_uc003nbj.1_68_8
hsa-miR-660-3p tgctgAGGAGGagaa ACCUCCUG m6b Disrupted HHFCT_137045_uc003nbj.1_68_8
hsa-miR-6749-3p tgctgaGGAGGAGaa CUCCUCCC m7a Disrupted HHFCT_137045_uc003nbj.1_68_8
hsa-miR-6787-3p tGCTGAGAaggagaa UCUCAGCU m7a Created HHFCT_137045_uc003nbj.1_68_8
hsa-miR-6792-3p tgctgaGGAGGAGaa CUCCUCCA m7a Disrupted HHFCT_137045_uc003nbj.1_68_8
hsa-miR-6868-3p tgctgAGAAGGAgaa UUCCUUCU m7b Created HHFCT_137045_uc003nbj.1_68_8
hsa-miR-1248 tgctgAGAAGGagaa ACCUUCUU m6b Created HHFCT_137045_uc003nbj.1_68_8

Mutation Mutation ID Sample Name Cancer Type
chr6:g.15511305T>C COSM1075258 TCGA-A5-A0G9-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6757-5p attgCATCCCTgctg UAGGGAUG m7b Created HHFCT_137045_uc003nbj.1_68_8
hsa-miR-6510-5p attgcatCCCTGCTg CAGCAGGG m7b Created HHFCT_137045_uc003nbj.1_68_8
hsa-miR-6165 attgcatTCCTGCTg CAGCAGGA m7b Disrupted HHFCT_137045_uc003nbj.1_68_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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