SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0025658
Gene Symbol: ITPR2
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Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr12:g.26439178C>T COSM3871357 TCGA-EE-A3J7-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-875-3p cttTTTCCAGcaaac CCUGGAAA m7b Disrupted HPCB3_5507_G7543.1_26592089
hsa-miR-1287-5p cttttTCCAGCAaac UGCUGGAU m7a Disrupted HPCB3_5507_G7543.1_26592089
hsa-miR-3135b cttttTCCAGCaaac GGCUGGAG m6b Disrupted HPCB3_5507_G7543.1_26592089
hsa-miR-3148 cTTTTTCCAgcaaac UGGAAAAA m8a (m8a->m7a) HPCB3_5507_G7543.1_26592089
hsa-miR-449c-3p ctttttCTAGCAAac UUGCUAGU m7a Created HPCB3_5507_G7543.1_26592089
hsa-miR-8067 cttTTTCTAGcaaac CCUAGAAA m7b Created HPCB3_5507_G7543.1_26592089
hsa-miR-6508-5p cttTTTCTAGcaaac UCUAGAAA m7b Created HPCB3_5507_G7543.1_26592089
hsa-miR-6124 ctTTTTCCagcaaac GGGAAAAG m6b Disrupted HPCB3_5507_G7543.1_26592089

Mutation Mutation ID Sample Name Cancer Type
chr12:g.26439177A>T COSM3811724 TCGA-A7-A5ZV-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4722-5p ttttTCCTGCaaaca GGCAGGAG m6b Created HPCB3_5507_G7543.1_26592089
hsa-miR-557 tttttccTGCAAACa GUUUGCAC m7a Created HPCB3_5507_G7543.1_26592089
hsa-miR-6511b-5p tttttCCTGCAaaca CUGCAGGC m6b Created HPCB3_5507_G7543.1_26592089
hsa-miR-6811-5p tttttCCTGCAaaca AUGCAGGC m6b Created HPCB3_5507_G7543.1_26592089
hsa-miR-873-5p tttTTCCTGCaaaca GCAGGAAC m7a Created HPCB3_5507_G7543.1_26592089
hsa-miR-875-3p ttTTTCCAGcaaaca CCUGGAAA m7b (m7b->m6b) HPCB3_5507_G7543.1_26592089
hsa-miR-1286 ttttTCCTGCAaaca UGCAGGAC m7a Created HPCB3_5507_G7543.1_26592089
hsa-miR-1287-5p ttttTCCAGCAaaca UGCUGGAU m7a Disrupted HPCB3_5507_G7543.1_26592089
hsa-miR-3135b ttttTCCAGCaaaca GGCUGGAG m6b Disrupted HPCB3_5507_G7543.1_26592089
hsa-miR-3148 TTTTTCCAgcaaaca UGGAAAAA m8a Disrupted HPCB3_5507_G7543.1_26592089

Mutation Mutation ID Sample Name Cancer Type
chr12:g.26439161C>G COSM3811723 TCGA-GM-A2D9-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3674 aagatcTCTACAATg AUUGUAGA m8a Disrupted HPCB3_5507_G7543.1_26592089
hsa-let-7g-3p aagatCTGTACAatg CUGUACAG m7b Created HPCB3_5507_G7543.1_26592089
hsa-let-7a-2-3p aagatCTGTACAatg CUGUACAG m7b Created HPCB3_5507_G7543.1_26592089
hsa-let-7c-3p aagatcTGTACAatg CUGUACAA m6b Created HPCB3_5507_G7543.1_26592089
hsa-miR-4732-5p aagatCTCTACAatg UGUAGAGC m7a Disrupted HPCB3_5507_G7543.1_26592089
hsa-miR-6832-5p aagaTCTCTACaatg AGUAGAGA m7b Disrupted HPCB3_5507_G7543.1_26592089

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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