SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0025651
Gene Symbol: ITPR2
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Browse Pathways

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr12:g.26428043C>T COSM2202876 TCGA-F5-6814-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1288-5p gcagttgTGATCTGc GCAGAUCA m7b Created HHRBL_3386_BCBL1-2of3-SCL_5945

Mutation Mutation ID Sample Name Cancer Type
chr12:g.26428042G>A COSM1360984 TCGA-F4-6808-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1288-5p cagttgcGATCTGCa GCAGAUCA m7a Disrupted HHRBL_3386_BCBL1-2of3-SCL_5945
hsa-miR-891b cAGTTGCAatctgca UGCAACUU m7a Created HHRBL_3386_BCBL1-2of3-SCL_5945

Mutation Mutation ID Sample Name Cancer Type
chr12:g.26428000T>C COSM4041032 TCGA-CD-A4MI-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-365a-3p ctgtGGGCATTcggc UAAUGCCC m7b Created HHRBL_3386_BCBL1-2of3-SCL_5945
hsa-miR-365b-3p ctgtGGGCATTcggc UAAUGCCC m7b Created HHRBL_3386_BCBL1-2of3-SCL_5945

Mutation Mutation ID Sample Name Cancer Type
chr12:g.26427996C>T COSM1562172 D16 [skin][foot][malignant_melanoma][acral_lentiginous]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3926 gggtaTTTGGCCgtt UGGCCAAA m7b Created HHFCT_32236_cluster-5431_6_8
hsa-miR-3926 gggtaTTTGGCCgtt UGGCCAAA m7b Created HHRBL_3386_BCBL1-2of3-SCL_5945

Mutation Mutation ID Sample Name Cancer Type
chr12:g.26427975A>T COSM1360983 TCGA-CA-6718-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-16-2-3p atcAATATTGctcag CCAAUAUU m7b Created HHFKP_30870_cluster-5431_13_9
hsa-miR-195-3p atcAATATTGctcag CCAAUAUU m7b Created HHFKP_30870_cluster-5431_13_9
hsa-miR-3908 atcaatATTGCTCag GAGCAAUG m7a Created HHFKP_30870_cluster-5431_13_9
hsa-miR-3942-5p atcaaTATTGCTcag AAGCAAUA m7b Created HHFKP_30870_cluster-5431_13_9
hsa-miR-4703-5p atcaaTATTGCTcag UAGCAAUA m7b Created HHFKP_30870_cluster-5431_13_9

Mutation Mutation ID Sample Name Cancer Type
chr12:g.26427950G>A COSM938210 TCGA-D1-A16X-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3156-5p acaatAGATCTTggg AAAGAUCU m7b Created HHFKP_30869_cluster-5431_12_12

Mutation Mutation ID Sample Name Cancer Type
chr12:g.26427948C>A COSM938209 TCGA-AP-A056-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-323b-3p aatagGTATTGGGcc CCCAAUAC m8a Created HHFKP_30869_cluster-5431_12_12

Mutation Mutation ID Sample Name Cancer Type
chr12:g.26427919A>C COSM430935 TCGA-AR-A1AH-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-22-3p ttggtGCAGCTaatg AAGCUGCC m6b Disrupted HHFKP_30869_cluster-5431_12_12
hsa-miR-3130-3p ttGGTGCAGCtaatg GCUGCACC m8a Disrupted HHFKP_30869_cluster-5431_12_12
hsa-miR-593-5p tTGGTGCCgctaatg AGGCACCA m7b Created HHFKP_30869_cluster-5431_12_12

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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