SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0057082
Gene Symbol: ITGA6
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.172479677A>T COSM4935798 TCGA-ED-A459-01 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4318 ccatCACAGTaactc CACUGUGG m6b Disrupted HHFKP_84362_cluster-13239_3_14
hsa-miR-4679 ccATCACAGtaactc UCUGUGAU m7b (m7b->m6b) HHFKP_84362_cluster-13239_3_14
hsa-miR-4693-5p ccatCACAGTAactc AUACUGUG m7b Disrupted HHFKP_84362_cluster-13239_3_14
hsa-miR-892a ccatCACAGTaactc CACUGUGU m6b Disrupted HHFKP_84362_cluster-13239_3_14
hsa-miR-4318 ccatCACAGTaactc CACUGUGG m6b Disrupted HHFKP_84362_cluster-13239_3_14
hsa-miR-4679 ccATCACAGtaactc UCUGUGAU m7b (m7b->m6b) HHFKP_84362_cluster-13239_3_14
hsa-miR-4693-5p ccatCACAGTAactc AUACUGUG m7b Disrupted HHFKP_84362_cluster-13239_3_14
hsa-miR-892a ccatCACAGTaactc CACUGUGU m6b Disrupted HHFKP_84362_cluster-13239_3_14
hsa-miR-4318 ccatCACAGTaactc CACUGUGG m6b Disrupted HHFKP_84362_cluster-13239_3_14
hsa-miR-4679 ccATCACAGtaactc UCUGUGAU m7b (m7b->m6b) HHFKP_84362_cluster-13239_3_14
hsa-miR-4693-5p ccatCACAGTAactc AUACUGUG m7b Disrupted HHFKP_84362_cluster-13239_3_14
hsa-miR-892a ccatCACAGTaactc CACUGUGU m6b Disrupted HHFKP_84362_cluster-13239_3_14

Mutation Mutation ID Sample Name Cancer Type
chr2:g.172479667A>T COSM403760 LUAD-E01317 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3200-5p atTCAGATaaccatc AAUCUGAG m6b Created HHFKP_84362_cluster-13239_3_14
hsa-miR-4762-3p atTCAGAAaaccatc CUUCUGAU m6b Disrupted HHFKP_84362_cluster-13239_3_14
hsa-miR-487a-5p attcagATAACCAtc GUGGUUAU m7b Created HHFKP_84362_cluster-13239_3_14
hsa-miR-487b-5p attcagATAACCAtc GUGGUUAU m7b Created HHFKP_84362_cluster-13239_3_14

Mutation Mutation ID Sample Name Cancer Type
chr2:g.172479666A>T COSM24647 NCI-H2087 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-299-5p tattcaGTAAACCAt UGGUUUAC m8a Created HHFKP_84362_cluster-13239_3_14
hsa-miR-4427 TATTCAGAaaaccat UCUGAAUA m8a Disrupted HHFKP_84362_cluster-13239_3_14
hsa-miR-4680-3p tATTCAGAaaaccat UCUGAAUU m7a Disrupted HHFKP_84362_cluster-13239_3_14
hsa-miR-4762-3p tatTCAGAAaaccat CUUCUGAU m6b Disrupted HHFKP_84362_cluster-13239_3_14

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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