SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0040753
Gene Symbol: IRF8
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr16:g.85921255C>T COSM3889105 TCGA-EB-A5SG-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-146a-3p catttTTCAGAGaaa CCUCUGAA m7b Disrupted HPSEF_8956_G10751.1_85954859
hsa-miR-301a-5p cattttTCAGAGaaa GCUCUGAC m6b Disrupted HPSEF_8956_G10751.1_85954859
hsa-miR-301b-5p cattttTCAGAGaaa GCUCUGAC m6b Disrupted HPSEF_8956_G10751.1_85954859
hsa-miR-3191-5p catttttCAGAGAaa CUCUCUGG m6b Disrupted HPSEF_8956_G10751.1_85954859
hsa-miR-3921 cattttTCAGAGAaa UCUCUGAG m7a Disrupted HPSEF_8956_G10751.1_85954859
hsa-miR-4653-5p cattttTCAGAGAaa UCUCUGAG m7a Disrupted HPSEF_8956_G10751.1_85954859
hsa-miR-4684-5p catttttTAGAGAaa CUCUCUAC m6b Created HPSEF_8956_G10751.1_85954859
hsa-miR-520f-5p catttTTTAGAGaaa CCUCUAAA m7b Created HPSEF_8956_G10751.1_85954859

Mutation Mutation ID Sample Name Cancer Type
chr16:g.85921248C>T COSM1709484 YUDAB [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7641 caGAGATCAtttttc UUGAUCUC m7b (m7b->m6b) HPSEF_8956_G10751.1_85954859
hsa-miR-5692a cagagATTATTTttc CAAAUAAU m7b Created HPSEF_8956_G10751.1_85954859
hsa-miR-3662 cagagaTCATTTTtc GAAAAUGA m7b Disrupted HPSEF_8956_G10751.1_85954859

Mutation Mutation ID Sample Name Cancer Type
chr16:g.85921237A>G COSM4129451 PTC-7C [thyroid][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4737 gtgCCTCGCAccaga AUGCGAGG m7b Created HPSEF_8956_G10751.1_85954859
hsa-miR-4466 gtgcctCGCACCaga GGGUGCGG m6b Created HPSEF_8956_G10751.1_85954859
hsa-miR-4316 gtGCCTCACaccaga GGUGAGGC m7b (m7b->m6b) HPSEF_8956_G10751.1_85954859
hsa-miR-381-5p gtgCCTCGCaccaga AGCGAGGU m6b Created HPSEF_8956_G10751.1_85954859
hsa-miR-3650 gtgcctCACACCaga AGGUGUGU m6b Disrupted HPSEF_8956_G10751.1_85954859
hsa-miR-548q gtgcctcGCACCAGa GCUGGUGC m7b Created HPSEF_8956_G10751.1_85954859
hsa-miR-6765-5p gtGCCTCACaccaga GUGAGGCG m7a (m7a->m6a) HPSEF_8956_G10751.1_85954859
hsa-miR-7978 gtgcctcACACCAGa UCUGGUGU m7b Disrupted HPSEF_8956_G10751.1_85954859

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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