SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0075416
Gene Symbol: IRF4
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr6:g.397219G>A COSM321045 TCGA-G4-6315-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-663b accccgcGGCCACCa GGUGGCCC m7a Disrupted HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-647 accccGCAGCCACca GUGGCUGC m8a Created HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-604 acccCGCAGCCacca AGGCUGCG m7b Created HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-4734 acCCCGCAGCcacca GCUGCGGG m8a Created HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-3648 accCCGCGGCcacca AGCCGCGG m7b Disrupted HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-3648 accCCGCGGCcacca AGCCGCGG m7b Disrupted HHRBC_10737_BC3-2of3-SCL_4438
hsa-miR-4734 acCCCGCAGCcacca GCUGCGGG m8a Created HHRBC_10737_BC3-2of3-SCL_4438
hsa-miR-604 acccCGCAGCCacca AGGCUGCG m7b Created HHRBC_10737_BC3-2of3-SCL_4438
hsa-miR-647 accccGCAGCCACca GUGGCUGC m8a Created HHRBC_10737_BC3-2of3-SCL_4438
hsa-miR-663b accccgcGGCCACCa GGUGGCCC m7a Disrupted HHRBC_10737_BC3-2of3-SCL_4438

Mutation Mutation ID Sample Name Cancer Type
chr6:g.397217G>A COSM1079040 TCGA-AP-A051-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3648 ggaccCCGCGGCcac AGCCGCGG m7b Disrupted HHRBC_10737_BC3-2of3-SCL_4438
hsa-miR-6742-5p ggACCCCACggccac AGUGGGGU m7b (m6b->m7b) HHRBC_10737_BC3-2of3-SCL_4438
hsa-miR-3648 ggaccCCGCGGCcac AGCCGCGG m7b Disrupted HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-6742-5p ggACCCCACggccac AGUGGGGU m7b (m6b->m7b) HHRBL_11983_BCBL1-2of3-SCL_2206

Mutation Mutation ID Sample Name Cancer Type
chr6:g.397206G>A COSM4693026 T3225 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-513b-3p ccaTGACATTTggac AAAUGUCA m8a Created HHRBC_10737_BC3-2of3-SCL_4438
hsa-miR-598-3p ccATGACGTttggac UACGUCAU m7b (m7b->m6b) HHRBC_10737_BC3-2of3-SCL_4438
hsa-miR-513b-3p ccaTGACATTTggac AAAUGUCA m8a Created HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-598-3p ccATGACGTttggac UACGUCAU m7b (m7b->m6b) HHRBL_11983_BCBL1-2of3-SCL_2206

Mutation Mutation ID Sample Name Cancer Type
chr6:g.397188G>A COSM1079039 TCGA-AP-A0LM-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1263 aaatcccGTACCAat AUGGUACC m6b Disrupted HHRBC_10737_BC3-2of3-SCL_4438
hsa-miR-150-3p aaatcccGTACCAat CUGGUACA m6b Disrupted HHRBC_10737_BC3-2of3-SCL_4438
hsa-miR-4681 aaaTCCCGTaccaat AACGGGAA m6b Disrupted HHRBC_10737_BC3-2of3-SCL_4438
hsa-miR-5089-5p aAATCCCAtaccaat GUGGGAUU m7b Created HHRBC_10737_BC3-2of3-SCL_4438
hsa-miR-6871-5p aaaTCCCATaccaat CAUGGGAG m6b Created HHRBC_10737_BC3-2of3-SCL_4438
hsa-miR-1263 aaatcccGTACCAat AUGGUACC m6b Disrupted HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-150-3p aaatcccGTACCAat CUGGUACA m6b Disrupted HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-4681 aaaTCCCGTaccaat AACGGGAA m6b Disrupted HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-5089-5p aAATCCCAtaccaat GUGGGAUU m7b Created HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-6871-5p aaaTCCCATaccaat CAUGGGAG m6b Created HHRBL_11983_BCBL1-2of3-SCL_2206

Mutation Mutation ID Sample Name Cancer Type
chr6:g.397170G>T COSM1546336 TCGA-50-5930-01 [lung][right_lower_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1255a cggaTCATCCacacc AGGAUGAG m6b Created HHRBC_10737_BC3-2of3-SCL_4438
hsa-miR-1255b-5p cggaTCATCCacacc CGGAUGAG m6b Created HHRBC_10737_BC3-2of3-SCL_4438
hsa-miR-3151-3p cGGATCAGccacacc CCUGAUCC m7b Disrupted HHRBC_10737_BC3-2of3-SCL_4438
hsa-miR-3691-5p cggatCATCCACacc AGUGGAUG m7b Created HHRBC_10737_BC3-2of3-SCL_4438
hsa-miR-376b-5p cggatcATCCACacc CGUGGAUA m6b Created HHRBC_10737_BC3-2of3-SCL_4438
hsa-miR-376c-5p cggatcATCCACacc GGUGGAUA m6b Created HHRBC_10737_BC3-2of3-SCL_4438
hsa-miR-3911 cggatcaTCCACACc UGUGUGGA m7b Created HHRBC_10737_BC3-2of3-SCL_4438
hsa-miR-4474-3p cggatcAGCCACAcc UUGUGGCU m7b Disrupted HHRBC_10737_BC3-2of3-SCL_4438
hsa-miR-4752 cggatcATCCACAcc UUGUGGAU m7b Created HHRBC_10737_BC3-2of3-SCL_4438
hsa-miR-644a cggatcaGCCACACc AGUGUGGC m7b Disrupted HHRBC_10737_BC3-2of3-SCL_4438
hsa-miR-647 cggatCAGCCACacc GUGGCUGC m7a Disrupted HHRBC_10737_BC3-2of3-SCL_4438
hsa-miR-8056 cggatcATCCACacc CGUGGAUU m6b Created HHRBC_10737_BC3-2of3-SCL_4438
hsa-miR-1255a cggaTCATCCacacc AGGAUGAG m6b Created HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-1255b-5p cggaTCATCCacacc CGGAUGAG m6b Created HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-3151-3p cGGATCAGccacacc CCUGAUCC m7b Disrupted HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-3691-5p cggatCATCCACacc AGUGGAUG m7b Created HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-376b-5p cggatcATCCACacc CGUGGAUA m6b Created HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-376c-5p cggatcATCCACacc GGUGGAUA m6b Created HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-3911 cggatcaTCCACACc UGUGUGGA m7b Created HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-4474-3p cggatcAGCCACAcc UUGUGGCU m7b Disrupted HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-4752 cggatcATCCACAcc UUGUGGAU m7b Created HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-644a cggatcaGCCACACc AGUGUGGC m7b Disrupted HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-647 cggatCAGCCACacc GUGGCUGC m7a Disrupted HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-8056 cggatcATCCACacc CGUGGAUU m6b Created HHRBL_11983_BCBL1-2of3-SCL_2206

Mutation Mutation ID Sample Name Cancer Type
chr6:g.397164G>A COSM1079038 TCGA-B5-A11Y-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1298-3p acgtCCCAGATcagc CAUCUGGG m7b Created HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-204-3p acgTCCCAGatcagc GCUGGGAA m6b Created HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-3151-3p acgtcccGGATCAGc CCUGAUCC m7b Disrupted HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-4298 acGTCCCAGatcagc CUGGGACA m7a (m6a->m7a) HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-4314 acgTCCCAGAtcagc CUCUGGGA m7b Created HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-4454 acgtccCGGATCagc GGAUCCGA m6b Disrupted HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-4497 acgTCCCGGAtcagc CUCCGGGA m7b Disrupted HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-4646-5p acgTCCCAGatcagc ACUGGGAA m6b Created HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-619-5p acgTCCCAGatcagc GCUGGGAU m6b Created HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-6506-5p acgTCCCAGatcagc ACUGGGAU m6b Created HHRBL_11983_BCBL1-2of3-SCL_2206
Mutation Mutation ID Sample Name Cancer Type
chr6:g.397159G>T COSM1546337 TCGA-55-7907-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr6:g.397159G>A COSM2153954 TCGA-12-0688 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7852-3p ggACTACATcccgga UAUGUAGU m7b (m6b->m7b) HHRBL_11983_BCBL1-2of3-SCL_2206
Mutation Mutation ID Sample Name Cancer Type
chr6:g.397158C>T COSM3077883 TCGA-DK-A3WW-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr6:g.397147T>A COSM387626 LUAD-S01357 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1976 ccgaaGCAGGAGGga CCUCCUGC m8a Created HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-370-3p ccgaAGCAGGaggga GCCUGCUG m6b Created HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-4667-3p ccgaagcAGGAGGGa UCCCUCCU m7b Created HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-660-3p ccgaagCAGGAGGga ACCUCCUG m7b Created HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-6893-3p ccgaAGCAGGaggga CCCUGCUG m6b Created HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-766-3p ccgaaGCTGGAGgga ACUCCAGC m7b Disrupted HHRBL_11983_BCBL1-2of3-SCL_2206

Mutation Mutation ID Sample Name Cancer Type
chr6:g.397142G>A COSM1179728 SWE-36 [prostate][NS][adenoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-412-5p cTCGACCAaagctgg UGGUCGAC m7a Created HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-9-5p ctcgACCAAAGctgg UCUUUGGU m7b Created HHRBL_11983_BCBL1-2of3-SCL_2206

Mutation Mutation ID Sample Name Cancer Type
chr6:g.397138G>A COSM3830471 CHC1731T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3184-5p aCCCCTCAaccgaag UGAGGGGC m7a Created HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-423-5p aCCCCTCAaccgaag UGAGGGGC m7a Created HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-5194 ACCCCTCAaccgaag UGAGGGGU m8a Created HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-6734-5p aCCCCTCAAccgaag UUGAGGGG m8a (m7a->m8a) HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-6738-5p ACCCCTCGaccgaag CGAGGGGU m8a Disrupted HHRBL_11983_BCBL1-2of3-SCL_2206

Mutation Mutation ID Sample Name Cancer Type
chr6:g.397130C>A COSM3873870 TCGA-BR-4368-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4642 atGATGCCAcccctc AUGGCAUC m7b (m7b->m6b) HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-4651 atgatgCCACCCCtc CGGGGUGG m7b Disrupted HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-4711-5p aTGATGCAacccctc UGCAUCAG m7a Created HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-608 atgatgCCACCCCTc AGGGGUGG m8a Disrupted HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-6782-5p atgatgcCACCCCTc UAGGGGUG m7b Disrupted HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-7112-3p aTGATGCAacccctc UGCAUCAC m7a Created HHRBL_11983_BCBL1-2of3-SCL_2206
hsa-miR-4642 atGATGCCAcccctc AUGGCAUC m7b (m7b->m6b) HPCB1_33593_G42912.1_397125
hsa-miR-4651 atgatgCCACCCCtc CGGGGUGG m7b Disrupted HPCB1_33593_G42912.1_397125
hsa-miR-4711-5p aTGATGCAacccctc UGCAUCAG m7a Created HPCB1_33593_G42912.1_397125
hsa-miR-608 atgatgCCACCCCTc AGGGGUGG m8a Disrupted HPCB1_33593_G42912.1_397125
hsa-miR-6782-5p atgatgcCACCCCTc UAGGGGUG m7b Disrupted HPCB1_33593_G42912.1_397125
hsa-miR-7112-3p aTGATGCAacccctc UGCAUCAC m7a Created HPCB1_33593_G42912.1_397125
hsa-miR-4642 atGATGCCAcccctc AUGGCAUC m7b (m7b->m6b) HPSEF_19033_G22965.1_397124
hsa-miR-4651 atgatgCCACCCCtc CGGGGUGG m7b Disrupted HPSEF_19033_G22965.1_397124
hsa-miR-4711-5p aTGATGCAacccctc UGCAUCAG m7a Created HPSEF_19033_G22965.1_397124
hsa-miR-608 atgatgCCACCCCTc AGGGGUGG m8a Disrupted HPSEF_19033_G22965.1_397124
hsa-miR-6782-5p atgatgcCACCCCTc UAGGGGUG m7b Disrupted HPSEF_19033_G22965.1_397124
hsa-miR-7112-3p aTGATGCAacccctc UGCAUCAC m7a Created HPSEF_19033_G22965.1_397124

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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