SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0001569
Gene Symbol: IRF4
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.393296C>A COSM220752 06-24915 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][diffuse_large_B_cell_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4699-5p agaagagAATCTTCc AGAAGAUU m7b Created HHRBL_11982_BCBL1-2of3-SCL_546
hsa-miR-6515-3p aGAAGAGAatcttcc UCUCUUCA m7a Created HHRBL_11982_BCBL1-2of3-SCL_546
hsa-miR-6809-3p agAAGAGAAtcttcc CUUCUCUU m7b (m6b->m7b) HHRBL_11982_BCBL1-2of3-SCL_546
Mutation Mutation ID Sample Name Cancer Type
chr6:g.393294A>C COSM220751 99-27137 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][diffuse_large_B_cell_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr6:g.393270C>G COSM220627 05-24395 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][diffuse_large_B_cell_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1226-3p ccccggGCTGGTGtg UCACCAGC m7b Disrupted HHRBL_11982_BCBL1-2of3-SCL_546
hsa-miR-3940-3p ccCCGGGCTGgtgtg CAGCCCGG m8a Disrupted HHRBL_11982_BCBL1-2of3-SCL_546
hsa-miR-4532 CCCCGGGGtggtgtg CCCCGGGG m8a Created HHRBL_11982_BCBL1-2of3-SCL_546

Mutation Mutation ID Sample Name Cancer Type
chr6:g.393267G>A COSM4610437 2292385 [haematopoietic_and_lymphoid_tissue][central_nervous_system][lymphoid_neoplasm][primary_central_nervous_system_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3940-3p gtaccCCGGGCTGgt CAGCCCGG m8a Disrupted HHRBL_11982_BCBL1-2of3-SCL_546
hsa-miR-4532 gtaCCCCGGGctggt CCCCGGGG m7b Disrupted HHRBL_11982_BCBL1-2of3-SCL_546
hsa-miR-661 gtacCCCAGGCtggt UGCCUGGG m7b Created HHRBL_11982_BCBL1-2of3-SCL_546
hsa-miR-6849-3p gtaccccAGGCTGGt ACCAGCCU m7b Created HHRBL_11982_BCBL1-2of3-SCL_546
hsa-miR-6852-5p gtaCCCCAGGctggt CCCUGGGG m7b Created HHRBL_11982_BCBL1-2of3-SCL_546
hsa-miR-7155-5p gtACCCCAGgctggt UCUGGGGU m7b (m6b->m7b) HHRBL_11982_BCBL1-2of3-SCL_546

Mutation Mutation ID Sample Name Cancer Type
chr6:g.393251C>G COSM3358022 tumor_4104893 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6743-3p agatcgaGAGCGGCa AGCCGCUC m7b Created HHRBL_11982_BCBL1-2of3-SCL_546

Mutation Mutation ID Sample Name Cancer Type
chr6:g.393249G>A COSM3873841 TCGA-BR-8680-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1267 ccagaTCAACAGcgg CCUGUUGA m7b Created HHRBL_11982_BCBL1-2of3-SCL_546

Mutation Mutation ID Sample Name Cancer Type
chr6:g.393246A>G COSM220628 05-24395 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][diffuse_large_B_cell_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3661 cgaCCAGGTCgacag UGACCUGG m7b Created HHRBL_11982_BCBL1-2of3-SCL_546
hsa-miR-631 cgaCCAGGTCgacag AGACCUGG m7b Created HHRBL_11982_BCBL1-2of3-SCL_546

Mutation Mutation ID Sample Name Cancer Type
chr6:g.393222C>T COSM4171587 17_tFL [haematopoietic_and_lymphoid_tissue][lymph_node][lymphoid_neoplasm][diffuse_large_B_cell_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-25-5p cgggaagCTCCGCCa AGGCGGAG m7b Disrupted HHRBL_11982_BCBL1-2of3-SCL_546
hsa-miR-658 cgggaagCTCCGCCa GGCGGAGG m7a Disrupted HHRBL_11982_BCBL1-2of3-SCL_546

Mutation Mutation ID Sample Name Cancer Type
chr6:g.393206C>T COSM3358021 tumor_4104893 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4660 cggtGAGCTGCggca UGCAGCUC m7b Disrupted HHRBL_11982_BCBL1-2of3-SCL_546
hsa-miR-6750-3p cgGTGAGTTgcggca GAACUCAC m7b (m6b->m7b) HHRBL_11982_BCBL1-2of3-SCL_546

Mutation Mutation ID Sample Name Cancer Type
chr6:g.393206C>G COSM220749 06-24915 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][diffuse_large_B_cell_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4660 cggtGAGCTGCggca UGCAGCUC m7b Disrupted HHRBL_11982_BCBL1-2of3-SCL_546

Mutation Mutation ID Sample Name Cancer Type
chr6:g.393205G>C COSM220626 05-24395 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][diffuse_large_B_cell_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-370-5p gcgGTGACCTGcggc CAGGUCAC m8a Created HHRBL_11982_BCBL1-2of3-SCL_546
hsa-miR-4660 gcggtGAGCTGCggc UGCAGCUC m7b Disrupted HHRBL_11982_BCBL1-2of3-SCL_546
hsa-miR-6886-5p gcggtgaCCTGCGGc CCCGCAGG m7b Created HHRBL_11982_BCBL1-2of3-SCL_546

Mutation Mutation ID Sample Name Cancer Type
chr6:g.393205G>A COSM1731950 14-RS [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][chronic_lymphocytic_leukaemia-small_lymphocytic_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4660 gcggtGAGCTGCggc UGCAGCUC m7b Disrupted HHRBL_11982_BCBL1-2of3-SCL_546

Mutation Mutation ID Sample Name Cancer Type
chr6:g.393204A>G COSM1621621 HCC133T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4660 cgcggtGAGCTGCgg UGCAGCUC m7b Disrupted HHRBL_11982_BCBL1-2of3-SCL_546
hsa-miR-4690-3p cgcggTGGGCTGCgg GCAGCCCA m8a Created HHRBL_11982_BCBL1-2of3-SCL_546
hsa-miR-5685 cgcggTGGGCTGcgg ACAGCCCA m7b Created HHRBL_11982_BCBL1-2of3-SCL_546

Mutation Mutation ID Sample Name Cancer Type
chr6:g.393203G>A COSM4915524 TCGA-CC-A7IF-01 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4660 gcgcggtGAGCTGCg UGCAGCUC m7b Disrupted HHRBL_11982_BCBL1-2of3-SCL_546

Mutation Mutation ID Sample Name Cancer Type
chr6:g.393199C>T COSM1731951 32-RS [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][chronic_lymphocytic_leukaemia-small_lymphocytic_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-197-3p atgagcGTGGTGAgc UUCACCAC m7b Created HHRBL_11982_BCBL1-2of3-SCL_546
hsa-miR-574-3p aTGAGCGTGgtgagc CACGCUCA m8a (m7a->m8a) HHRBL_11982_BCBL1-2of3-SCL_546
hsa-miR-6511a-3p atgagcgTGGTGAGc CCUCACCA m7b Created HHRBL_11982_BCBL1-2of3-SCL_546
hsa-miR-6511b-3p atgagcgTGGTGAGc CCUCACCA m7b Created HHRBL_11982_BCBL1-2of3-SCL_546

Mutation Mutation ID Sample Name Cancer Type
chr6:g.393188C>T COSM1079000 TCGA-BS-A0UV-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4680-5p gAGAGTTCggcatga AGAACUCU m7b Disrupted HHRBL_11982_BCBL1-2of3-SCL_546
hsa-miR-6716-3p gagAGTTCGGcatga UCCGAACU m7b Disrupted HHRBL_11982_BCBL1-2of3-SCL_546

Mutation Mutation ID Sample Name Cancer Type
chr6:g.393178G>A COSM4539558 CSCC-41-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-340-3p ggccGAGACGGAgag UCCGUCUC m8a Created HHRBL_11982_BCBL1-2of3-SCL_546
hsa-miR-3605-3p ggccgagACGGAGag CCUCCGUG m6b Created HHRBL_11982_BCBL1-2of3-SCL_546
hsa-miR-4485-5p ggccgAGGCGGagag ACCGCCUG m6b Disrupted HHRBL_11982_BCBL1-2of3-SCL_546
hsa-miR-6827-3p ggccGAGACGGagag ACCGUCUC m7b Created HHRBL_11982_BCBL1-2of3-SCL_546

Mutation Mutation ID Sample Name Cancer Type
chr6:g.393157A>G COSM220747 DLBCL-PatientJ [haematopoietic_and_lymphoid_tissue][lymph_node][lymphoid_neoplasm][diffuse_large_B_cell_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1206 ggCATGAACctggag UGUUCAUG m7b (m7b->m6b) HHRBL_11982_BCBL1-2of3-SCL_546
hsa-miR-3155a ggcatGAGCCTGGag CCAGGCUC m8a Created HHRBL_11982_BCBL1-2of3-SCL_546
hsa-miR-3155b ggcatGAGCCTGGag CCAGGCUC m8a Created HHRBL_11982_BCBL1-2of3-SCL_546
hsa-miR-4645-5p ggcatgaGCCTGGag ACCAGGCA m6b Created HHRBL_11982_BCBL1-2of3-SCL_546
hsa-miR-484 ggcatGAGCCTGgag UCAGGCUC m7b Created HHRBL_11982_BCBL1-2of3-SCL_546
hsa-miR-6847-3p ggCATGAGCCtggag GGCUCAUG m8a Created HHRBL_11982_BCBL1-2of3-SCL_546

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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