SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NR_046000
Gene Symbol: IRF4
Browse Associations

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr6:g.410727C>T COSN4927771 PD4109a [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3908 ttccgttCATTGCTc GAGCAAUG m7b Disrupted HHRBL_11995_BCBL1-2of3-SCL_33
hsa-miR-3942-5p ttccgttTATTGCTc AAGCAAUA m7b Created HHRBL_11995_BCBL1-2of3-SCL_33
hsa-miR-4703-5p ttccgttTATTGCTc UAGCAAUA m7b Created HHRBL_11995_BCBL1-2of3-SCL_33
hsa-miR-553 ttCCGTTTattgctc AAAACGGU m6b Created HHRBL_11995_BCBL1-2of3-SCL_33
hsa-miR-887-3p ttCCGTTCAttgctc GUGAACGG m7b (m7b->m6b) HHRBL_11995_BCBL1-2of3-SCL_33
hsa-miR-95-5p ttccgTTTATTGctc UCAAUAAA m7b Created HHRBL_11995_BCBL1-2of3-SCL_33
hsa-miR-3908 ttccgttCATTGCTc GAGCAAUG m7b Disrupted HPCB3_19420_G26635.1_410746
hsa-miR-3942-5p ttccgttTATTGCTc AAGCAAUA m7b Created HPCB3_19420_G26635.1_410746
hsa-miR-4703-5p ttccgttTATTGCTc UAGCAAUA m7b Created HPCB3_19420_G26635.1_410746
hsa-miR-553 ttCCGTTTattgctc AAAACGGU m6b Created HPCB3_19420_G26635.1_410746
hsa-miR-887-3p ttCCGTTCAttgctc GUGAACGG m7b (m7b->m6b) HPCB3_19420_G26635.1_410746
hsa-miR-95-5p ttccgTTTATTGctc UCAAUAAA m7b Created HPCB3_19420_G26635.1_410746

Mutation Mutation ID Sample Name Cancer Type
chr6:g.410514T>C COSN2162021 RK037_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-101-3p tacaGTACTGTtacc UACAGUAC m7b Created HHRBL_11995_BCBL1-2of3-SCL_33
hsa-miR-1278 taCAGTACTgttacc UAGUACUG m7b (m6b->m7b) HHRBL_11995_BCBL1-2of3-SCL_33
hsa-miR-194-5p tacagtaCTGTTACc UGUAACAG m7b Created HHRBL_11995_BCBL1-2of3-SCL_33
hsa-miR-200b-3p taCAGTATTgttacc UAAUACUG m7b (m7b->m6b) HHRBL_11995_BCBL1-2of3-SCL_33
hsa-miR-200c-3p taCAGTATTgttacc UAAUACUG m7b (m7b->m6b) HHRBL_11995_BCBL1-2of3-SCL_33
hsa-miR-338-5p tacagTATTGTTacc AACAAUAU m7a Disrupted HHRBL_11995_BCBL1-2of3-SCL_33
hsa-miR-429 taCAGTATTgttacc UAAUACUG m7b (m7b->m6b) HHRBL_11995_BCBL1-2of3-SCL_33

Mutation Mutation ID Sample Name Cancer Type
chr6:g.410024A>C COSN4927767 PD4115a [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4725-5p cCAGGGTCTgaccta AGACCCUG m8a (m7a->m8a) HHRBL_11994_BCBL1-2of3-SCL_1104
hsa-miR-504-5p cCAGGGTCTgaccta AGACCCUG m8a (m7a->m8a) HHRBL_11994_BCBL1-2of3-SCL_1104
hsa-miR-6801-5p ccagggTCTGACCta UGGUCAGA m7b Created HHRBL_11994_BCBL1-2of3-SCL_1104
hsa-miR-4725-5p cCAGGGTCTgaccta AGACCCUG m8a (m7a->m8a) HHSJI_2251_Peak9553|19|0.2241|5|U52682|IRF4
hsa-miR-504-5p cCAGGGTCTgaccta AGACCCUG m8a (m7a->m8a) HHSJI_2251_Peak9553|19|0.2241|5|U52682|IRF4
hsa-miR-6801-5p ccagggTCTGACCta UGGUCAGA m7b Created HHSJI_2251_Peak9553|19|0.2241|5|U52682|IRF4
hsa-miR-4725-5p cCAGGGTCTgaccta AGACCCUG m8a (m7a->m8a) HPCB1_33618_G42935.1_410018
hsa-miR-504-5p cCAGGGTCTgaccta AGACCCUG m8a (m7a->m8a) HPCB1_33618_G42935.1_410018
hsa-miR-6801-5p ccagggTCTGACCta UGGUCAGA m7b Created HPCB1_33618_G42935.1_410018

Mutation Mutation ID Sample Name Cancer Type
chr6:g.409602T>C COSN9783067 AOCS-148-1-4 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4716-5p tgcAACATGGAtatg UCCAUGUU m8a Disrupted HHRBL_11993_BCBL1-2of3-SCL_311
hsa-miR-4800-3p tgcaacACGGATatg CAUCCGUC m6b Created HHRBL_11993_BCBL1-2of3-SCL_311
hsa-miR-7151-5p tgcaacATGGATatg GAUCCAUC m6b Disrupted HHRBL_11993_BCBL1-2of3-SCL_311
hsa-miR-4716-5p tgcAACATGGAtatg UCCAUGUU m8a Disrupted HPCB1_33613_G42931.1_409599
hsa-miR-4800-3p tgcaacACGGATatg CAUCCGUC m6b Created HPCB1_33613_G42931.1_409599
hsa-miR-7151-5p tgcaacATGGATatg GAUCCAUC m6b Disrupted HPCB1_33613_G42931.1_409599
hsa-miR-4716-5p tgcAACATGGAtatg UCCAUGUU m8a Disrupted HPCB3_19413_G26628.1_409601
hsa-miR-4800-3p tgcaacACGGATatg CAUCCGUC m6b Created HPCB3_19413_G26628.1_409601
hsa-miR-7151-5p tgcaacATGGATatg GAUCCAUC m6b Disrupted HPCB3_19413_G26628.1_409601

Mutation Mutation ID Sample Name Cancer Type
chr6:g.409318G>C COSN2161994 RK082_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2117 aacagtAGAGAACAg UGUUCUCU m8a Disrupted HHRBL_11993_BCBL1-2of3-SCL_311
hsa-miR-3686 aacagTACAGAacag AUCUGUAA m6b Created HHRBL_11993_BCBL1-2of3-SCL_311
hsa-miR-4273 aacagtaGAGAACAg GUGUUCUC m7b Disrupted HHRBL_11993_BCBL1-2of3-SCL_311
hsa-miR-4652-3p aacagtACAGAACag GUUCUGUU m7a Created HHRBL_11993_BCBL1-2of3-SCL_311
hsa-miR-4684-5p aacaGTAGAGAacag CUCUCUAC m7b Disrupted HHRBL_11993_BCBL1-2of3-SCL_311
hsa-miR-7156-5p aacagtaGAGAACAg UUGUUCUC m7b Disrupted HHRBL_11993_BCBL1-2of3-SCL_311

Mutation Mutation ID Sample Name Cancer Type
chr6:g.409013C>G COSN9783043 AOCS-165-1-X [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4286 cagtagAGTGGGGcg ACCCCACU m7b Created HHRBL_11992_BCBL1-2of3-SCL_1926
hsa-miR-4758-3p cagtagaGTGGGGCg UGCCCCAC m7b Created HHRBL_11992_BCBL1-2of3-SCL_1926
hsa-miR-6777-3p cagtAGAGTGGggcg UCCACUCU m7b Created HHRBL_11992_BCBL1-2of3-SCL_1926
hsa-miR-934 cAGTAGACtggggcg UGUCUACU m7b Disrupted HHRBL_11992_BCBL1-2of3-SCL_1926

Mutation Mutation ID Sample Name Cancer Type
chr6:g.408962A>G COSN6320606 RK028_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3144-3p ttgcttAGGTATAcc AUAUACCU m7b Created HHRBL_11992_BCBL1-2of3-SCL_1926
hsa-miR-4503 tTGCTTAAgtatacc UUUAAGCA m7b Disrupted HHRBL_11992_BCBL1-2of3-SCL_1926
hsa-miR-3144-3p ttgcttAGGTATAcc AUAUACCU m7b Created HPCB1_33605_G42923.1_408972
hsa-miR-4503 tTGCTTAAgtatacc UUUAAGCA m7b Disrupted HPCB1_33605_G42923.1_408972
hsa-miR-3144-3p ttgcttAGGTATAcc AUAUACCU m7b Created HPSLC_16346_G19426.1_408972
hsa-miR-4503 tTGCTTAAgtatacc UUUAAGCA m7b Disrupted HPSLC_16346_G19426.1_408972

Mutation Mutation ID Sample Name Cancer Type
chr6:g.408577G>C COSN9783023 AOCS-094-1-1 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3675-3p cttTAGAGATGctaa CAUCUCUA m8a Disrupted HHRBL_11991_BCBL1-2of3-SCL_244
hsa-miR-520f-5p cTTTAGAGatgctaa CCUCUAAA m7b Disrupted HHRBL_11991_BCBL1-2of3-SCL_244
hsa-miR-3675-3p cttTAGAGATGctaa CAUCUCUA m8a Disrupted HHSJI_2250_Peak43965|33|0.2097|5|U52682|IRF4
hsa-miR-520f-5p cTTTAGAGatgctaa CCUCUAAA m7b Disrupted HHSJI_2250_Peak43965|33|0.2097|5|U52682|IRF4

Mutation Mutation ID Sample Name Cancer Type
chr6:g.408445C>T COSN6320592 RK163_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3653-3p aaaCTTCTTAttttc CUAAGAAG m7b Created HHRBL_11990_BCBL1-2of3-SCL_8118
hsa-miR-4476 aaaCTTCCTattttc CAGGAAGG m6b Disrupted HHRBL_11990_BCBL1-2of3-SCL_8118
hsa-miR-6876-5p aaaCTTCCTattttc CAGGAAGG m6b Disrupted HHRBL_11990_BCBL1-2of3-SCL_8118

Mutation Mutation ID Sample Name Cancer Type
chr6:g.408206G>A COSN6320584 RK121_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6083 gtaaGATATAAattg CUUAUAUC m7b Created HHRBL_11988_BCBL1-2of3-SCL_250

Mutation Mutation ID Sample Name Cancer Type
chr6:g.407806G>A COSN2161948 RK032_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-19a-5p caccCAAAACaagtg AGUUUUGC m6b Created HHRBL_11986_BCBL1-2of3-SCL_496
hsa-miR-19b-1-5p caccCAAAACaagtg AGUUUUGC m6b Created HHRBL_11986_BCBL1-2of3-SCL_496
hsa-miR-19b-2-5p caccCAAAACaagtg AGUUUUGC m6b Created HHRBL_11986_BCBL1-2of3-SCL_496
hsa-miR-2052 caccCAAAACAagtg UGUUUUGA m7a Created HHRBL_11986_BCBL1-2of3-SCL_496
hsa-miR-431-5p caccCAAGACAagtg UGUCUUGC m7a Disrupted HHRBL_11986_BCBL1-2of3-SCL_496
hsa-miR-511-5p cacccAAGACAagtg GUGUCUUU m6b Disrupted HHRBL_11986_BCBL1-2of3-SCL_496
hsa-miR-635 caCCCAAGacaagtg ACUUGGGC m6b Disrupted HHRBL_11986_BCBL1-2of3-SCL_496

Mutation Mutation ID Sample Name Cancer Type
chr6:g.407593G>T COSM176980 TCGA-AG-A002-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-126-5p tattcAATAATGaaa CAUUAUUA m7a Created HHRBL_11985_BCBL1-2of3-SCL_5456
hsa-miR-1298-5p tattcaaGAATGAAa UUCAUUCG m7a Disrupted HHRBL_11985_BCBL1-2of3-SCL_5456
hsa-miR-4528 tattcaATAATGAaa UCAUUAUA m7a Created HHRBL_11985_BCBL1-2of3-SCL_5456
hsa-miR-4635 taTTCAAGAatgaaa UCUUGAAG m7a (m7a->m6a) HHRBL_11985_BCBL1-2of3-SCL_5456
hsa-miR-526b-5p tatTCAAGAatgaaa CUCUUGAG m6b Disrupted HHRBL_11985_BCBL1-2of3-SCL_5456
hsa-miR-126-5p tattcAATAATGaaa CAUUAUUA m7a Created HPCB1_33595_G42914.1_407567
hsa-miR-1298-5p tattcaaGAATGAAa UUCAUUCG m7a Disrupted HPCB1_33595_G42914.1_407567
hsa-miR-4528 tattcaATAATGAaa UCAUUAUA m7a Created HPCB1_33595_G42914.1_407567
hsa-miR-4635 taTTCAAGAatgaaa UCUUGAAG m7a (m7a->m6a) HPCB1_33595_G42914.1_407567
hsa-miR-526b-5p tatTCAAGAatgaaa CUCUUGAG m6b Disrupted HPCB1_33595_G42914.1_407567
hsa-miR-126-5p tattcAATAATGaaa CAUUAUUA m7a Created HPSLB_6205_G7563.1_407593
hsa-miR-1298-5p tattcaaGAATGAAa UUCAUUCG m7a Disrupted HPSLB_6205_G7563.1_407593
hsa-miR-4528 tattcaATAATGAaa UCAUUAUA m7a Created HPSLB_6205_G7563.1_407593
hsa-miR-4635 taTTCAAGAatgaaa UCUUGAAG m7a (m7a->m6a) HPSLB_6205_G7563.1_407593
hsa-miR-526b-5p tatTCAAGAatgaaa CUCUUGAG m6b Disrupted HPSLB_6205_G7563.1_407593

Mutation Mutation ID Sample Name Cancer Type
chr6:g.407568A>G COSM1443989 TCGA-CA-6717-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3684 accacAGGTCTAtcc UUAGACCU m7b Created HHRBL_11985_BCBL1-2of3-SCL_5456
hsa-miR-631 accaCAGGTCTatcc AGACCUGG m7a Created HHRBL_11985_BCBL1-2of3-SCL_5456
hsa-miR-3684 accacAGGTCTAtcc UUAGACCU m7b Created HPCB1_33595_G42914.1_407567
hsa-miR-631 accaCAGGTCTatcc AGACCUGG m7a Created HPCB1_33595_G42914.1_407567
hsa-miR-3684 accacAGGTCTAtcc UUAGACCU m7b Created HPSEF_19036_G22968.1_407567
hsa-miR-631 accaCAGGTCTatcc AGACCUGG m7a Created HPSEF_19036_G22968.1_407567
hsa-miR-3684 accacAGGTCTAtcc UUAGACCU m7b Created HPSLB_6205_G7563.1_407593
hsa-miR-631 accaCAGGTCTatcc AGACCUGG m7a Created HPSLB_6205_G7563.1_407593

Mutation Mutation ID Sample Name Cancer Type
chr6:g.407567G>A COSM1443988 TCGA-CK-6746-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-134-3p taCCACAGatctatc CCUGUGGG m6b Disrupted HPCB1_33595_G42914.1_407567
hsa-miR-134-3p taCCACAGatctatc CCUGUGGG m6b Disrupted HPSEF_19036_G22968.1_407567
hsa-miR-134-3p taCCACAGatctatc CCUGUGGG m6b Disrupted HPSLB_6205_G7563.1_407593

Mutation Mutation ID Sample Name Cancer Type
chr6:g.407546G>A COSM3374286 TCGA-EL-A3T3-01 [thyroid][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4445-5p cacatcAACAATCca AGAUUGUU m7b Created HHRBL_11985_BCBL1-2of3-SCL_5456
hsa-miR-4502 caCATCAGCaatcca GCUGAUGA m7a (m7a->m6a) HHRBL_11985_BCBL1-2of3-SCL_5456
hsa-miR-628-5p cacaTCAGCAatcca AUGCUGAC m6b Disrupted HHRBL_11985_BCBL1-2of3-SCL_5456
hsa-miR-653-5p cacaTCAACAatcca GUGUUGAA m6b Created HHRBL_11985_BCBL1-2of3-SCL_5456
hsa-miR-8075 caCATCAGCAatcca UGCUGAUG m8a Disrupted HHRBL_11985_BCBL1-2of3-SCL_5456
hsa-miR-4445-5p cacatcAACAATCca AGAUUGUU m7b Created HPCB3_19400_G26614.1_407537
hsa-miR-4502 caCATCAGCaatcca GCUGAUGA m7a (m7a->m6a) HPCB3_19400_G26614.1_407537
hsa-miR-628-5p cacaTCAGCAatcca AUGCUGAC m6b Disrupted HPCB3_19400_G26614.1_407537
hsa-miR-653-5p cacaTCAACAatcca GUGUUGAA m6b Created HPCB3_19400_G26614.1_407537
hsa-miR-8075 caCATCAGCAatcca UGCUGAUG m8a Disrupted HPCB3_19400_G26614.1_407537

Mutation Mutation ID Sample Name Cancer Type
chr6:g.407544C>T COSM4908743 TCGA-P5-A5F2-01 [central_nervous_system][brain][glioma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4502 aacaCATCAGCaatc GCUGAUGA m7a Disrupted HHRBL_11985_BCBL1-2of3-SCL_5456
hsa-miR-628-5p aacacaTCAGCAatc AUGCUGAC m6b Disrupted HHRBL_11985_BCBL1-2of3-SCL_5456
hsa-miR-8066 aaCACATTagcaatc CAAUGUGA m6b Created HHRBL_11985_BCBL1-2of3-SCL_5456
hsa-miR-8075 aacaCATCAGCAatc UGCUGAUG m8a Disrupted HHRBL_11985_BCBL1-2of3-SCL_5456
hsa-miR-4502 aacaCATCAGCaatc GCUGAUGA m7a Disrupted HPCB3_19400_G26614.1_407537
hsa-miR-628-5p aacacaTCAGCAatc AUGCUGAC m6b Disrupted HPCB3_19400_G26614.1_407537
hsa-miR-8066 aaCACATTagcaatc CAAUGUGA m6b Created HPCB3_19400_G26614.1_407537
hsa-miR-8075 aacaCATCAGCAatc UGCUGAUG m8a Disrupted HPCB3_19400_G26614.1_407537

Mutation Mutation ID Sample Name Cancer Type
chr6:g.407524T>C COSM3627130 TCGA-D9-A4Z3-01 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1204 gaggGGCCACGAttt UCGUGGCC m8a Created HHRBL_11985_BCBL1-2of3-SCL_5456
hsa-miR-210-5p gAGGGGCTacgattt AGCCCCUG m7a Disrupted HHRBL_11985_BCBL1-2of3-SCL_5456
hsa-miR-4323 gaGGGGCTacgattt CAGCCCCA m6b Disrupted HHRBL_11985_BCBL1-2of3-SCL_5456
hsa-miR-663b gagGGGCCACgattt GGUGGCCC m7b Created HHRBL_11985_BCBL1-2of3-SCL_5456
hsa-miR-6769a-3p gAGGGGCTacgattt GAGCCCCU m7b Disrupted HHRBL_11985_BCBL1-2of3-SCL_5456
hsa-miR-1204 gaggGGCCACGAttt UCGUGGCC m8a Created HPSEF_19035_G22967.1_407539
hsa-miR-210-5p gAGGGGCTacgattt AGCCCCUG m7a Disrupted HPSEF_19035_G22967.1_407539
hsa-miR-4323 gaGGGGCTacgattt CAGCCCCA m6b Disrupted HPSEF_19035_G22967.1_407539
hsa-miR-663b gagGGGCCACgattt GGUGGCCC m7b Created HPSEF_19035_G22967.1_407539
hsa-miR-6769a-3p gAGGGGCTacgattt GAGCCCCU m7b Disrupted HPSEF_19035_G22967.1_407539

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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