SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_000572
Gene Symbol: IL10
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Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr1:g.206772434T>C COSM3934430 ESCC-083T [oesophagus][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-210-3p gaaggcACGCACAGc CUGUGCGU m8a Created HHRBL_1574_BCBL1-2of3-SCL_1347
hsa-miR-5011-3p gaaggCATGCACagc GUGCAUGG m7a Disrupted HHRBL_1574_BCBL1-2of3-SCL_1347
hsa-miR-532-5p gAAGGCATGcacagc CAUGCCUU m8a (m8a->m7a) HHRBL_1574_BCBL1-2of3-SCL_1347
hsa-miR-6821-5p gaaggCACGCACagc GUGCGUGG m7a Created HHRBL_1574_BCBL1-2of3-SCL_1347

Mutation Mutation ID Sample Name Cancer Type
chr1:g.206772409C>T COSM209676 TCGA-AA-3984-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1911-3p tctgttGCCTGGTcc CACCAGGC m7b Disrupted HHRBL_1574_BCBL1-2of3-SCL_1347
hsa-miR-196a-3p tcTGTTGCCtggtcc CGGCAACA m7b (m7b->m6b) HHRBL_1574_BCBL1-2of3-SCL_1347
hsa-miR-4645-5p tctgtTGCCTGGTcc ACCAGGCA m8a Disrupted HHRBL_1574_BCBL1-2of3-SCL_1347
hsa-miR-4673 tctgtTGCCTGGtcc UCCAGGCA m7b Disrupted HHRBL_1574_BCBL1-2of3-SCL_1347
hsa-miR-4742-5p tctgTTGCCTGgtcc UCAGGCAA m7b Disrupted HHRBL_1574_BCBL1-2of3-SCL_1347

Mutation Mutation ID Sample Name Cancer Type
chr1:g.206768675C>T COSM2152401 TCGA-06-0939 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3668 tcatcaaCTACATag AAUGUAGA m6b Disrupted HHRBL_1573_BCBL1-2of3-SCL_3557
hsa-miR-380-3p tcatcaATTACATAg UAUGUAAU m8a Created HHRBL_1573_BCBL1-2of3-SCL_3557
hsa-miR-4495 tcatcaaTTACATag AAUGUAAA m6b Created HHRBL_1573_BCBL1-2of3-SCL_3557
hsa-miR-4703-3p tcatCAACTACAtag UGUAGUUG m8a Disrupted HHRBL_1573_BCBL1-2of3-SCL_3557
hsa-miR-7852-3p tcatcaACTACATAg UAUGUAGU m8a Disrupted HHRBL_1573_BCBL1-2of3-SCL_3557
hsa-miR-3668 tcatcaaCTACATag AAUGUAGA m6b Disrupted HPCB1_4305_G5247.1_206942023
hsa-miR-380-3p tcatcaATTACATAg UAUGUAAU m8a Created HPCB1_4305_G5247.1_206942023
hsa-miR-4495 tcatcaaTTACATag AAUGUAAA m6b Created HPCB1_4305_G5247.1_206942023
hsa-miR-4703-3p tcatCAACTACAtag UGUAGUUG m8a Disrupted HPCB1_4305_G5247.1_206942023
hsa-miR-7852-3p tcatcaACTACATAg UAUGUAGU m8a Disrupted HPCB1_4305_G5247.1_206942023
hsa-miR-3668 tcatcaaCTACATag AAUGUAGA m6b Disrupted HPCB3_2197_G2958.1_206942023
hsa-miR-380-3p tcatcaATTACATAg UAUGUAAU m8a Created HPCB3_2197_G2958.1_206942023
hsa-miR-4495 tcatcaaTTACATag AAUGUAAA m6b Created HPCB3_2197_G2958.1_206942023
hsa-miR-4703-3p tcatCAACTACAtag UGUAGUUG m8a Disrupted HPCB3_2197_G2958.1_206942023
hsa-miR-7852-3p tcatcaACTACATAg UAUGUAGU m8a Disrupted HPCB3_2197_G2958.1_206942023

Mutation Mutation ID Sample Name Cancer Type
chr1:g.206768673A>G COSM3943389 AOCS-057-1-2 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3668 atcaaCTACATagaa AAUGUAGA m6b Disrupted HHRBL_1573_BCBL1-2of3-SCL_3557
hsa-miR-4703-3p atCAACTACAtagaa UGUAGUUG m8a Disrupted HHRBL_1573_BCBL1-2of3-SCL_3557
hsa-miR-7852-3p atcaACTACATAgaa UAUGUAGU m8a Disrupted HHRBL_1573_BCBL1-2of3-SCL_3557
hsa-miR-3668 atcaaCTACATagaa AAUGUAGA m6b Disrupted HPCB1_4305_G5247.1_206942023
hsa-miR-4703-3p atCAACTACAtagaa UGUAGUUG m8a Disrupted HPCB1_4305_G5247.1_206942023
hsa-miR-7852-3p atcaACTACATAgaa UAUGUAGU m8a Disrupted HPCB1_4305_G5247.1_206942023
hsa-miR-3668 atcaaCTACATagaa AAUGUAGA m6b Disrupted HPCB3_2197_G2958.1_206942023
hsa-miR-4703-3p atCAACTACAtagaa UGUAGUUG m8a Disrupted HPCB3_2197_G2958.1_206942023
hsa-miR-7852-3p atcaACTACATAgaa UAUGUAGU m8a Disrupted HPCB3_2197_G2958.1_206942023

Mutation Mutation ID Sample Name Cancer Type
chr1:g.206768643G>A COSM3482494 TCGA-FS-A1ZA-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3149 aagATACAAAactga UUUGUAUG m7a Created HHRBL_1573_BCBL1-2of3-SCL_3557
hsa-miR-4328 aagatacAAAACTGa CCAGUUUU m7b Created HHRBL_1573_BCBL1-2of3-SCL_3557
hsa-miR-6506-3p aaGATACGAaactga UCGUAUCA m7a (m7a->m6a) HHRBL_1573_BCBL1-2of3-SCL_3557

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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