SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001291844
Gene Symbol: IKZF1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr7:g.50403424C>T COSN9944362 C0038T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3529-3p gcactcTTGTTGTgt AACAACAA m7b Created HHRBL_13181_BCBL1-2of3-SCL_8915
hsa-miR-4693-3p gCACTCTCgttgtgt UGAGAGUG m7b Disrupted HHRBL_13181_BCBL1-2of3-SCL_8915
hsa-miR-5003-5p gcactctTGTTGTGt UCACAACA m7b Created HHRBL_13181_BCBL1-2of3-SCL_8915

Mutation Mutation ID Sample Name Cancer Type
chr7:g.50403081T>A COSN8026086 8014964 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-186-5p caggaATTCTTTtct CAAAGAAU m7b Disrupted HHSJI_2419_Peak125|13|0.1489|3|NM_006060|IKZF1
hsa-miR-548l caggaATACTTTTct AAAAGUAU m8a Created HHSJI_2419_Peak125|13|0.1489|3|NM_006060|IKZF1
hsa-miR-548n caggaaTACTTTTct CAAAAGUA m7b Created HHSJI_2419_Peak125|13|0.1489|3|NM_006060|IKZF1
hsa-miR-186-5p caggaATTCTTTtct CAAAGAAU m7b Disrupted HPCB1_36365_G46583.1_50470785
hsa-miR-548l caggaATACTTTTct AAAAGUAU m8a Created HPCB1_36365_G46583.1_50470785
hsa-miR-548n caggaaTACTTTTct CAAAAGUA m7b Created HPCB1_36365_G46583.1_50470785

Mutation Mutation ID Sample Name Cancer Type
chr7:g.50345432C>T COSN6884803 RK136_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1264 cagAGACTTaaaggg CAAGUCUU m6b Created HHRBC_11960_BC3-2of3-SCL_8645
hsa-miR-3184-3p caGAGACTTaaaggg AAAGUCUC m7b (m6b->m7b) HHRBC_11960_BC3-2of3-SCL_8645
hsa-miR-6509-5p cagagACCTAAaggg AUUAGGUA m6b Disrupted HHRBC_11960_BC3-2of3-SCL_8645

Mutation Mutation ID Sample Name Cancer Type
chr7:g.50329937G>T COSN8026065 8033523 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3925-3p attcCTGGAGagtga ACUCCAGU m6b Disrupted HHRBL_13180_BCBL1-2of3-SCL_9401
hsa-miR-4639-3p attcctgGAGAGTGa UCACUCUC m7b Disrupted HHRBL_13180_BCBL1-2of3-SCL_9401
hsa-miR-4700-3p atTCCTGTagagtga CACAGGAC m6b Created HHRBL_13180_BCBL1-2of3-SCL_9401
hsa-miR-665 atTCCTGGagagtga ACCAGGAG m6b Disrupted HHRBL_13180_BCBL1-2of3-SCL_9401
hsa-miR-7151-3p attCCTGTAGagtga CUACAGGC m7a Created HHRBL_13180_BCBL1-2of3-SCL_9401
hsa-miR-766-3p attcCTGGAGagtga ACUCCAGC m6b Disrupted HHRBL_13180_BCBL1-2of3-SCL_9401

Mutation Mutation ID Sample Name Cancer Type
chr7:g.50329929G>A COSN5659326 RK060_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1234-3p tCAGGCCGAttcctg UCGGCCUG m8a (m8a->m7a) HHRBL_13180_BCBL1-2of3-SCL_9401
hsa-miR-6878-3p tcAGGCCAattcctg CUGGCCUC m6b Created HHRBL_13180_BCBL1-2of3-SCL_9401
hsa-miR-7107-5p tCAGGCCGAttcctg UCGGCCUG m8a (m8a->m7a) HHRBL_13180_BCBL1-2of3-SCL_9401

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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