SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001013398
Gene Symbol: IGFBP3
Browse Associations
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr7:g.45917424C>T COSM1210367 186T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3680-5p AGTGAGTCggaggaa GACUCACU m8a Disrupted HHFKP_130721_cluster-21376_15_124
hsa-miR-4691-5p agtgagtTGGAGGAa GUCCUCCA m7b Created HHFKP_130721_cluster-21376_15_124
hsa-miR-519d-5p agtgagTTGGAGGaa CCUCCAAA m7a Created HHFKP_130721_cluster-21376_15_124
hsa-miR-6750-3p aGTGAGTTggaggaa GAACUCAC m7b Created HHFKP_130721_cluster-21376_15_124
hsa-miR-6792-3p agtgagtTGGAGGAa CUCCUCCA m7b Created HHFKP_130721_cluster-21376_15_124

Mutation Mutation ID Sample Name Cancer Type
chr7:g.45917424C>A COSM3881358 TCGA-CG-4465-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3680-5p AGTGAGTCggaggaa GACUCACU m8a Disrupted HHFKP_130721_cluster-21376_15_124
hsa-miR-5193 agtgagtAGGAGGAa UCCUCCUC m7a Created HHFKP_130721_cluster-21376_15_124
hsa-miR-660-3p agtgagtAGGAGGaa ACCUCCUG m6b Created HHFKP_130721_cluster-21376_15_124

Mutation Mutation ID Sample Name Cancer Type
chr7:g.45917420G>A COSM4548200 CSCC-11-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1238-3p agtcgGAGGAAGacc CUUCCUCG m7a Disrupted HHFKP_130721_cluster-21376_15_124
hsa-miR-4691-5p agtcGGAGGAagacc GUCCUCCA m6b Disrupted HHFKP_130721_cluster-21376_15_124
hsa-miR-4778-3p agtcgGAAGAAGAcc UCUUCUUC m8a Created HHFKP_130721_cluster-21376_15_124
hsa-miR-6740-3p agtcggaAGAAGACc UGUCUUCU m7b Created HHFKP_130721_cluster-21376_15_124
hsa-miR-6749-3p agtcGGAGGAagacc CUCCUCCC m6b Disrupted HHFKP_130721_cluster-21376_15_124
hsa-miR-6792-3p agtcGGAGGAagacc CUCCUCCA m6b Disrupted HHFKP_130721_cluster-21376_15_124
hsa-miR-6875-3p agtcGGAAGAAgacc AUUCUUCC m7b Created HHFKP_130721_cluster-21376_15_124

Mutation Mutation ID Sample Name Cancer Type
chr7:g.45917413C>T COSM1210368 587228 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-17-3p ggaagACTGCAGcgc ACUGCAGU m7b Created HHFKP_130721_cluster-21376_15_124

Mutation Mutation ID Sample Name Cancer Type
chr7:g.45917412G>A COSM1090101 TCGA-AP-A051-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6848-3p gaAGACCACagcgcc GUGGUCUC m7a (m6a->m7a) HHFKP_130721_cluster-21376_15_124

Mutation Mutation ID Sample Name Cancer Type
chr7:g.45917407G>A COSM1090100 TCGA-B5-A11E-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1250-5p ccgcAGCACCGgcag ACGGUGCU m7b Created HHFKP_130721_cluster-21376_15_124

Mutation Mutation ID Sample Name Cancer Type
chr7:g.45917405C>A COSM601508 TCGA-44-2657-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1539 gcaGCGCAGGcagtg UCCUGCGC m7b Created HHFKP_130721_cluster-21376_15_124
hsa-miR-191-3p gcAGCGCAGgcagtg GCUGCGCU m7b (m6b->m7b) HHFKP_130721_cluster-21376_15_124
hsa-miR-4763-5p gcagcGCAGGCagtg CGCCUGCC m6b Created HHFKP_130721_cluster-21376_15_124
hsa-miR-6894-3p gcagcGCAGGCAgtg UUGCCUGC m7b Created HHFKP_130721_cluster-21376_15_124

Mutation Mutation ID Sample Name Cancer Type
chr7:g.45917404G>A COSM3881357 TCGA-BR-6452-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3692-5p cagcgCCAGCAGtgt CCUGCUGG m7b Created HHFKP_130721_cluster-21376_15_124
hsa-miR-6890-3p cagcgccGGCAGTGt CCACUGCC m7b Disrupted HHFKP_130721_cluster-21376_15_124

Mutation Mutation ID Sample Name Cancer Type
chr7:g.45916613G>A COSM1549727 TCGA-55-7281-01 [lung][middle_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1279 cctCAATATGctgag UCAUAUUG m7b Created HHFCT_142481_cluster-21376_14_3349
hsa-miR-383-3p cctcaatGTGCTGag ACAGCACU m6b Disrupted HHFCT_142481_cluster-21376_14_3349
hsa-miR-4310 cctcaatATGCTGag GCAGCAUU m6b Created HHFCT_142481_cluster-21376_14_3349

Mutation Mutation ID Sample Name Cancer Type
chr7:g.45916586C>A COSM94487 101359 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1-3p acACATTCCcaactg UGGAAUGU m7b (m7b->m6b) HHFCT_142481_cluster-21376_14_3349
hsa-miR-206 acACATTCCcaactg UGGAAUGU m7b (m7b->m6b) HHFCT_142481_cluster-21376_14_3349
hsa-miR-4259 acacattCCCAACTg CAGUUGGG m7b Disrupted HHFCT_142481_cluster-21376_14_3349
hsa-miR-4425 acacatTCCCAACtg UGUUGGGA m7b Disrupted HHFCT_142481_cluster-21376_14_3349
hsa-miR-450a-1-3p acacaTTCCCAActg AUUGGGAA m7b Disrupted HHFCT_142481_cluster-21376_14_3349
hsa-miR-613 acACATTCCcaactg AGGAAUGU m7b (m7b->m6b) HHFCT_142481_cluster-21376_14_3349
hsa-miR-6716-5p acaCATTCCCAactg UGGGAAUG m8a Disrupted HHFCT_142481_cluster-21376_14_3349

Mutation Mutation ID Sample Name Cancer Type
chr7:g.45916581C>T COSM1090097 TCGA-B5-A0JY-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-27a-3p ttcccaACTGTGAca UUCACAGU m7b Disrupted HHFCT_142481_cluster-21376_14_3349
hsa-miR-27b-3p ttcccaACTGTGAca UUCACAGU m7b Disrupted HHFCT_142481_cluster-21376_14_3349
hsa-miR-3681-3p ttcccaACTGTGaca ACACAGUG m6b Disrupted HHFCT_142481_cluster-21376_14_3349
hsa-miR-4259 ttCCCAACTGtgaca CAGUUGGG m8a Disrupted HHFCT_142481_cluster-21376_14_3349
hsa-miR-4425 tTCCCAACtgtgaca UGUUGGGA m7b Disrupted HHFCT_142481_cluster-21376_14_3349
hsa-miR-7849-3p ttccCAATTGTgaca GACAAUUG m7b Created HHFCT_142481_cluster-21376_14_3349

Mutation Mutation ID Sample Name Cancer Type
chr7:g.45914832G>A COSM3263478 SW48 [large_intestine][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-20a-3p acagcATGCAGagca ACUGCAUU m6b Disrupted HHHNE_8628_IGFBP3|NM_000598|exon_utr3|-3.72527459600793|-0.598523790873081
hsa-miR-3194-3p acagcatGCAGAGCa AGCUCUGC m7b Disrupted HHHNE_8628_IGFBP3|NM_000598|exon_utr3|-3.72527459600793|-0.598523790873081
hsa-miR-675-3p acaGCATACAGagca CUGUAUGC m8a Created HHHNE_8628_IGFBP3|NM_000598|exon_utr3|-3.72527459600793|-0.598523790873081
hsa-miR-20a-3p acagcATGCAGagca ACUGCAUU m6b Disrupted HHHSE_8628_IGFBP3|NM_000598|exon_utr3|-3.72527459600793|-0.598523790873081
hsa-miR-3194-3p acagcatGCAGAGCa AGCUCUGC m7b Disrupted HHHSE_8628_IGFBP3|NM_000598|exon_utr3|-3.72527459600793|-0.598523790873081
hsa-miR-675-3p acaGCATACAGagca CUGUAUGC m8a Created HHHSE_8628_IGFBP3|NM_000598|exon_utr3|-3.72527459600793|-0.598523790873081

Mutation Mutation ID Sample Name Cancer Type
chr7:g.45914829G>T COSM402877 LUAD-5V8LT [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-20a-3p gcATGCAGagcaagt ACUGCAUU m6b Disrupted HHHNE_8628_IGFBP3|NM_000598|exon_utr3|-3.72527459600793|-0.598523790873081
hsa-miR-31-3p gcatGCATAGCAagt UGCUAUGC m8a Created HHHNE_8628_IGFBP3|NM_000598|exon_utr3|-3.72527459600793|-0.598523790873081
hsa-miR-3194-3p gcatGCAGAGCaagt AGCUCUGC m7b Disrupted HHHNE_8628_IGFBP3|NM_000598|exon_utr3|-3.72527459600793|-0.598523790873081
hsa-miR-5691 gcatgCAGAGCAAgt UUGCUCUG m8a Disrupted HHHNE_8628_IGFBP3|NM_000598|exon_utr3|-3.72527459600793|-0.598523790873081
hsa-miR-6805-3p gcatgCAGAGCAAgt UUGCUCUG m8a Disrupted HHHNE_8628_IGFBP3|NM_000598|exon_utr3|-3.72527459600793|-0.598523790873081
hsa-miR-20a-3p gcATGCAGagcaagt ACUGCAUU m6b Disrupted HHHSE_8628_IGFBP3|NM_000598|exon_utr3|-3.72527459600793|-0.598523790873081
hsa-miR-31-3p gcatGCATAGCAagt UGCUAUGC m8a Created HHHSE_8628_IGFBP3|NM_000598|exon_utr3|-3.72527459600793|-0.598523790873081
hsa-miR-3194-3p gcatGCAGAGCaagt AGCUCUGC m7b Disrupted HHHSE_8628_IGFBP3|NM_000598|exon_utr3|-3.72527459600793|-0.598523790873081
hsa-miR-5691 gcatgCAGAGCAAgt UUGCUCUG m8a Disrupted HHHSE_8628_IGFBP3|NM_000598|exon_utr3|-3.72527459600793|-0.598523790873081
hsa-miR-6805-3p gcatgCAGAGCAAgt UUGCUCUG m8a Disrupted HHHSE_8628_IGFBP3|NM_000598|exon_utr3|-3.72527459600793|-0.598523790873081

Mutation Mutation ID Sample Name Cancer Type
chr7:g.45914827G>A COSM1090096 TCGA-AP-A051-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3194-3p atGCAGAGCaagtag AGCUCUGC m7b (m7b->m6b) HHHNE_8628_IGFBP3|NM_000598|exon_utr3|-3.72527459600793|-0.598523790873081
hsa-miR-4273 atgcAGAACAagtag GUGUUCUC m6b Created HHHNE_8628_IGFBP3|NM_000598|exon_utr3|-3.72527459600793|-0.598523790873081
hsa-miR-544a aTGCAGAAcaagtag AUUCUGCA m7b Created HHHNE_8628_IGFBP3|NM_000598|exon_utr3|-3.72527459600793|-0.598523790873081
hsa-miR-5691 atgCAGAGCAAgtag UUGCUCUG m8a Disrupted HHHNE_8628_IGFBP3|NM_000598|exon_utr3|-3.72527459600793|-0.598523790873081
hsa-miR-6739-3p atgcAGAACAAgtag AUUGUUCU m7b Created HHHNE_8628_IGFBP3|NM_000598|exon_utr3|-3.72527459600793|-0.598523790873081
hsa-miR-6805-3p atgCAGAGCAAgtag UUGCUCUG m8a Disrupted HHHNE_8628_IGFBP3|NM_000598|exon_utr3|-3.72527459600793|-0.598523790873081
hsa-miR-3194-3p atGCAGAGCaagtag AGCUCUGC m7b (m7b->m6b) HHHSE_8628_IGFBP3|NM_000598|exon_utr3|-3.72527459600793|-0.598523790873081
hsa-miR-4273 atgcAGAACAagtag GUGUUCUC m6b Created HHHSE_8628_IGFBP3|NM_000598|exon_utr3|-3.72527459600793|-0.598523790873081
hsa-miR-544a aTGCAGAAcaagtag AUUCUGCA m7b Created HHHSE_8628_IGFBP3|NM_000598|exon_utr3|-3.72527459600793|-0.598523790873081
hsa-miR-5691 atgCAGAGCAAgtag UUGCUCUG m8a Disrupted HHHSE_8628_IGFBP3|NM_000598|exon_utr3|-3.72527459600793|-0.598523790873081
hsa-miR-6739-3p atgcAGAACAAgtag AUUGUUCU m7b Created HHHSE_8628_IGFBP3|NM_000598|exon_utr3|-3.72527459600793|-0.598523790873081
hsa-miR-6805-3p atgCAGAGCAAgtag UUGCUCUG m8a Disrupted HHHSE_8628_IGFBP3|NM_000598|exon_utr3|-3.72527459600793|-0.598523790873081

Mutation Mutation ID Sample Name Cancer Type
chr7:g.45913008T>A COSN8023873 8047815 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser