SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0075951
Gene Symbol: HLA-DQA1
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.32641546G>A COSM1443638 TCGA-CA-6718-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-424-5p ctctaccGCTGCTac CAGCAGCA m6b Disrupted HPSEF_19284_G23270.1_32609305
hsa-miR-4274 ctctaccACTGCTac CAGCAGUC m6b Created HPSEF_19284_G23270.1_32609305
hsa-miR-4451 CTCTACCActgctac UGGUAGAG m8a Created HPSEF_19284_G23270.1_32609305
hsa-miR-4519 ctctacCACTGCTac CAGCAGUG m7b Created HPSEF_19284_G23270.1_32609305
hsa-miR-4524a-5p ctctaccGCTGCTAc AUAGCAGC m7b Disrupted HPSEF_19284_G23270.1_32609305
hsa-miR-4524b-5p ctctaccGCTGCTAc AUAGCAGC m7b Disrupted HPSEF_19284_G23270.1_32609305
hsa-miR-4536-5p ctCTACCACtgctac UGUGGUAG m7b (m6b->m7b) HPSEF_19284_G23270.1_32609305
hsa-miR-497-5p ctctaccGCTGCTac CAGCAGCA m6b Disrupted HPSEF_19284_G23270.1_32609305
hsa-miR-503-5p ctctacCGCTGCTAc UAGCAGCG m8a Disrupted HPSEF_19284_G23270.1_32609305
hsa-miR-646 ctctaccGCTGCTac AAGCAGCU m6b Disrupted HPSEF_19284_G23270.1_32609305
hsa-miR-6499-3p ctctacCACTGCTac AGCAGUGU m7a Created HPSEF_19284_G23270.1_32609305
hsa-miR-6838-5p ctctaccGCTGCTac AAGCAGCA m6b Disrupted HPSEF_19284_G23270.1_32609305
hsa-miR-424-5p ctctaccGCTGCTac CAGCAGCA m6b Disrupted HPSLC_16543_G19665.1_32609306
hsa-miR-4274 ctctaccACTGCTac CAGCAGUC m6b Created HPSLC_16543_G19665.1_32609306
hsa-miR-4451 CTCTACCActgctac UGGUAGAG m8a Created HPSLC_16543_G19665.1_32609306
hsa-miR-4519 ctctacCACTGCTac CAGCAGUG m7b Created HPSLC_16543_G19665.1_32609306
hsa-miR-4524a-5p ctctaccGCTGCTAc AUAGCAGC m7b Disrupted HPSLC_16543_G19665.1_32609306
hsa-miR-4524b-5p ctctaccGCTGCTAc AUAGCAGC m7b Disrupted HPSLC_16543_G19665.1_32609306
hsa-miR-4536-5p ctCTACCACtgctac UGUGGUAG m7b (m6b->m7b) HPSLC_16543_G19665.1_32609306
hsa-miR-497-5p ctctaccGCTGCTac CAGCAGCA m6b Disrupted HPSLC_16543_G19665.1_32609306
hsa-miR-503-5p ctctacCGCTGCTAc UAGCAGCG m8a Disrupted HPSLC_16543_G19665.1_32609306
hsa-miR-646 ctctaccGCTGCTac AAGCAGCU m6b Disrupted HPSLC_16543_G19665.1_32609306
hsa-miR-6499-3p ctctacCACTGCTac AGCAGUGU m7a Created HPSLC_16543_G19665.1_32609306
hsa-miR-6838-5p ctctaccGCTGCTac AAGCAGCA m6b Disrupted HPSLC_16543_G19665.1_32609306

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32641535A>C COSM3949058 2296_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-571 aaacgctCCAACTCt UGAGUUGG m7b Created HPSEF_19284_G23270.1_32609305
hsa-miR-6874-5p aaacGCTCCAactct AUGGAGCU m6b Created HPSEF_19284_G23270.1_32609305
hsa-miR-571 aaacgctCCAACTCt UGAGUUGG m7b Created HPSLC_16543_G19665.1_32609306
hsa-miR-6874-5p aaacGCTCCAactct AUGGAGCU m6b Created HPSLC_16543_G19665.1_32609306

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32641522A>G COSM4595379 SCC-25 [upper_aerodigestive_tract][head_neck][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-34b-3p gaacatcGTGATTaa CAAUCACU m6b Created HPSEF_19284_G23270.1_32609305
hsa-miR-433-3p gaacATCATGATtaa AUCAUGAU m8a Disrupted HPSEF_19284_G23270.1_32609305
hsa-miR-96-3p gaacatCATGATTaa AAUCAUGU m7a Disrupted HPSEF_19284_G23270.1_32609305
hsa-miR-34b-3p gaacatcGTGATTaa CAAUCACU m6b Created HPSLC_16543_G19665.1_32609306
hsa-miR-433-3p gaacATCATGATtaa AUCAUGAU m8a Disrupted HPSLC_16543_G19665.1_32609306
hsa-miR-96-3p gaacatCATGATTaa AAUCAUGU m7a Disrupted HPSLC_16543_G19665.1_32609306

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32641521CA>C COSM1443637 TCGA-CM-5348-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1245b-3p tgaaCATCTGAttaa UCAGAUGA m7a Created HPSEF_19284_G23270.1_32609305
hsa-miR-433-3p tgaacATCATGATtaa AUCAUGAU m8a Disrupted HPSEF_19284_G23270.1_32609305
hsa-miR-5100 tgaacATCTGAttaa UUCAGAUC m6b Created HPSEF_19284_G23270.1_32609305
hsa-miR-96-3p tgaacatCATGATTaa AAUCAUGU m7a Disrupted HPSEF_19284_G23270.1_32609305
hsa-miR-1245b-3p tgaaCATCTGAttaa UCAGAUGA m7a Created HPSLC_16543_G19665.1_32609306
hsa-miR-433-3p tgaacATCATGATtaa AUCAUGAU m8a Disrupted HPSLC_16543_G19665.1_32609306
hsa-miR-5100 tgaacATCTGAttaa UUCAGAUC m6b Created HPSLC_16543_G19665.1_32609306
hsa-miR-96-3p tgaacatCATGATTaa AAUCAUGU m7a Disrupted HPSLC_16543_G19665.1_32609306

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32641521C>T COSM3921486 TCGA-FW-A3R5-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-154-3p tgaacatTATGATTa AAUCAUAC m7a Created HPSEF_19284_G23270.1_32609305
hsa-miR-33a-3p tgAACATTatgatta CAAUGUUU m6b Created HPSEF_19284_G23270.1_32609305
hsa-miR-409-3p tgAACATTatgatta GAAUGUUG m6b Created HPSEF_19284_G23270.1_32609305
hsa-miR-433-3p tgaacATCATGATta AUCAUGAU m8a Disrupted HPSEF_19284_G23270.1_32609305
hsa-miR-487a-3p tgaacatTATGATTa AAUCAUAC m7a Created HPSEF_19284_G23270.1_32609305
hsa-miR-96-3p tgaacatCATGATTa AAUCAUGU m7a Disrupted HPSEF_19284_G23270.1_32609305
hsa-miR-154-3p tgaacatTATGATTa AAUCAUAC m7a Created HPSLC_16543_G19665.1_32609306
hsa-miR-33a-3p tgAACATTatgatta CAAUGUUU m6b Created HPSLC_16543_G19665.1_32609306
hsa-miR-409-3p tgAACATTatgatta GAAUGUUG m6b Created HPSLC_16543_G19665.1_32609306
hsa-miR-433-3p tgaacATCATGATta AUCAUGAU m8a Disrupted HPSLC_16543_G19665.1_32609306
hsa-miR-487a-3p tgaacatTATGATTa AAUCAUAC m7a Created HPSLC_16543_G19665.1_32609306
hsa-miR-96-3p tgaacatCATGATTa AAUCAUGU m7a Disrupted HPSLC_16543_G19665.1_32609306

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32641519A>AG COSM1443636 TCGA-CM-5348-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-433-3p cttgaacATCATGAt AUCAUGAU m7b Disrupted HPSEF_19284_G23270.1_32609305
hsa-miR-452-5p cttgAACAGTcatgat AACUGUUU m6b Created HPSEF_19284_G23270.1_32609305
hsa-miR-4676-3p cttgAACAGTcatgat CACUGUUU m6b Created HPSEF_19284_G23270.1_32609305
hsa-miR-892c-3p cttgAACAGTcatgat CACUGUUU m6b Created HPSEF_19284_G23270.1_32609305
hsa-miR-943 cttgaACAGTCAtgat CUGACUGU m7b Created HPSEF_19284_G23270.1_32609305
hsa-miR-433-3p cttgaacATCATGAt AUCAUGAU m7b Disrupted HPSLC_16543_G19665.1_32609306
hsa-miR-452-5p cttgAACAGTcatgat AACUGUUU m6b Created HPSLC_16543_G19665.1_32609306
hsa-miR-4676-3p cttgAACAGTcatgat CACUGUUU m6b Created HPSLC_16543_G19665.1_32609306
hsa-miR-892c-3p cttgAACAGTcatgat CACUGUUU m6b Created HPSLC_16543_G19665.1_32609306
hsa-miR-943 cttgaACAGTCAtgat CUGACUGU m7b Created HPSLC_16543_G19665.1_32609306

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32641509C>T COSM1754726 B87-Tumor [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-382-5p caaaacACAACTTga GAAGUUGU m7b Disrupted HPSEF_19284_G23270.1_32609305
hsa-miR-4307 cAAAACATaacttga AAUGUUUU m7b Created HPSEF_19284_G23270.1_32609305

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32641502C>T COSM1754725 PTC-14C [thyroid][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-140-3p gCTGTGGTAaaacac UACCACAG m8a (m7a->m8a) HPSEF_19284_G23270.1_32609305
hsa-miR-19a-5p gctgtgGCAAAACac AGUUUUGC m7b Disrupted HPSEF_19284_G23270.1_32609305
hsa-miR-19b-1-5p gctgtgGCAAAACac AGUUUUGC m7b Disrupted HPSEF_19284_G23270.1_32609305
hsa-miR-19b-2-5p gctgtgGCAAAACac AGUUUUGC m7b Disrupted HPSEF_19284_G23270.1_32609305
hsa-miR-2681-5p gctgtGGTAAAACac GUUUUACC m8a Created HPSEF_19284_G23270.1_32609305
hsa-miR-3064-3p gcTGTGGCAAaacac UUGCCACA m8a Disrupted HPSEF_19284_G23270.1_32609305
hsa-miR-4715-3p gctGTGGCAaaacac GUGCCACC m6b Disrupted HPSEF_19284_G23270.1_32609305
hsa-miR-4776-3p gctgTGGCAAaacac CUUGCCAU m6b Disrupted HPSEF_19284_G23270.1_32609305

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32641501G>C COSM1754724 PTC-14C [thyroid][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1271-5p ggctGTGCCAAaaca CUUGGCAC m7b Created HPSEF_19284_G23270.1_32609305
hsa-miR-182-5p ggctgTGCCAAAaca UUUGGCAA m7a Created HPSEF_19284_G23270.1_32609305
hsa-miR-19a-5p ggctgtgGCAAAACa AGUUUUGC m7b Disrupted HPSEF_19284_G23270.1_32609305
hsa-miR-19b-1-5p ggctgtgGCAAAACa AGUUUUGC m7b Disrupted HPSEF_19284_G23270.1_32609305
hsa-miR-19b-2-5p ggctgtgGCAAAACa AGUUUUGC m7b Disrupted HPSEF_19284_G23270.1_32609305
hsa-miR-3064-3p ggcTGTGGCAAaaca UUGCCACA m8a Disrupted HPSEF_19284_G23270.1_32609305
hsa-miR-4715-3p ggctGTGGCAaaaca GUGCCACC m6b Disrupted HPSEF_19284_G23270.1_32609305
hsa-miR-4776-3p ggctgTGGCAAaaca CUUGCCAU m6b Disrupted HPSEF_19284_G23270.1_32609305
hsa-miR-96-5p ggctGTGCCAAAaca UUUGGCAC m8a Created HPSEF_19284_G23270.1_32609305

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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