SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0070277
Gene Symbol: HELQ
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr4:g.83448821T>G COSM1058288 TCGA-AX-A0J0-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3529-3p agaTGTTGTaatgat AACAACAA m6b Created HHKTA_40564_NM_133636|1320|1359|1.90378940627731|0.157906881053399
hsa-miR-6504-3p agatgtTGTAATGat CAUUACAG m7a Created HHKTA_40564_NM_133636|1320|1359|1.90378940627731|0.157906881053399

Mutation Mutation ID Sample Name Cancer Type
chr4:g.83448814T>C COSM3606614 TCGA-ER-A19F-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-15b-3p ttaATGATTCttcca CGAAUCAU m7b Disrupted HHKTA_40564_NM_133636|1320|1359|1.90378940627731|0.157906881053399
hsa-miR-6077 ttaatgaCTCTTCCa GGGAAGAG m7b Created HHKTA_40564_NM_133636|1320|1359|1.90378940627731|0.157906881053399

Mutation Mutation ID Sample Name Cancer Type
chr4:g.83448812C>A COSM1058287 TCGA-A5-A0GP-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-15b-3p aATGATTCttccata CGAAUCAU m7b Disrupted HHKTA_40564_NM_133636|1320|1359|1.90378940627731|0.157906881053399
hsa-miR-6077 aatgatTCTTCCata GGGAAGAG m6b Disrupted HHKTA_40564_NM_133636|1320|1359|1.90378940627731|0.157906881053399
hsa-miR-6505-5p aatgatTATTCCAta UUGGAAUA m7b Created HHKTA_40564_NM_133636|1320|1359|1.90378940627731|0.157906881053399

Mutation Mutation ID Sample Name Cancer Type
chr4:g.83448809C>T COSM3940969 ESCC-011T [oesophagus][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-8076 gattctTCCATATgt UAUAUGGA m7b Disrupted HHKTA_40564_NM_133636|1320|1359|1.90378940627731|0.157906881053399
hsa-miR-6077 gatTCTTCCatatgt GGGAAGAG m6b Disrupted HHKTA_40564_NM_133636|1320|1359|1.90378940627731|0.157906881053399

Mutation Mutation ID Sample Name Cancer Type
chr4:g.83439758A>G COSN5579002 RK125_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5583-3p acatCATATTaagtt GAAUAUGG m6b Disrupted HHFCT_115250_cluster-17682_4_8
hsa-miR-4517 acaTCATATTaagtt AAAUAUGA m7b Disrupted HHFCT_115250_cluster-17682_4_8
hsa-miR-302c-5p acatcATGTTAAgtt UUUAACAU m7b Created HHFCT_115250_cluster-17682_4_8
hsa-miR-3143 acatcATGTTAagtt AUAACAUU m6b Created HHFCT_115250_cluster-17682_4_8

Mutation Mutation ID Sample Name Cancer Type
chr4:g.83427667C>A COSM1058282 TCGA-AP-A059-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6759-3p gAAAGGTCttgaagg UGACCUUU m7b Disrupted HHFCT_115249_cluster-17682_3_10

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser