SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0070276
Gene Symbol: HELQ
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr4:g.83421725G>A COSM291871 TCGA-AA-3530-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3655 tgGACAAGaacgttg GCUUGUCG m6b Disrupted HHFKP_107118_cluster-17682_1_324
hsa-miR-578 tggACAAGAAcgttg CUUCUUGU m7b Disrupted HHFKP_107118_cluster-17682_1_324

Mutation Mutation ID Sample Name Cancer Type
chr4:g.83421699C>T COSM1431422 TCGA-AZ-4315-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3613-3p tatctgTTTTTTGTt ACAAAAAA m8a Created HHFKP_107118_cluster-17682_1_324

Mutation Mutation ID Sample Name Cancer Type
chr4:g.83418171G>T COSM3606603 TCGA-EE-A2MD-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1283 cccttTTTGTAGAac UCUACAAA m8a Created HHFCT_115248_cluster-17682_2_7
hsa-miR-3613-3p cccTTTTTGTagaac ACAAAAAA m7a Created HHFCT_115248_cluster-17682_2_7
hsa-miR-520d-5p cccttTTTGTAGaac CUACAAAG m7a Created HHFCT_115248_cluster-17682_2_7
hsa-miR-524-5p cccttTTTGTAGaac CUACAAAG m7a Created HHFCT_115248_cluster-17682_2_7

Mutation Mutation ID Sample Name Cancer Type
chr4:g.83418157A>G COSM588737 TCGA-67-3771-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-103a-2-5p cttaccAAGAAGCTg AGCUUCUU m8a Disrupted HHFCT_115248_cluster-17682_2_7
hsa-miR-1343-3p cttaCCAGGAagctg CUCCUGGG m6b Created HHFCT_115248_cluster-17682_2_7
hsa-miR-4490 cTTACCAGgaagctg UCUGGUAA m7b Created HHFCT_115248_cluster-17682_2_7
hsa-miR-516a-3p cttaccAGGAAGCtg UGCUUCCU m7b Created HHFCT_115248_cluster-17682_2_7
hsa-miR-516b-3p cttaccAGGAAGCtg UGCUUCCU m7b Created HHFCT_115248_cluster-17682_2_7
hsa-miR-7162-5p cttaccAGGAAGCtg UGCUUCCU m7b Created HHFCT_115248_cluster-17682_2_7

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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